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The map label for this gene is agpA [H]

Identifier: 13472844

GI number: 13472844

Start: 2616332

End: 2618344

Strand: Direct

Name: agpA [H]

Synonym: mlr3265

Alternate gene names: 13472844

Gene position: 2616332-2618344 (Clockwise)

Preceding gene: 13472843

Following gene: 13472845

Centisome position: 37.18

GC content: 61.35

Gene sequence:

>2013_bases
ATGGGGACCGCAATTCCGCGACGAAGGCGACGAGGATATGCTGTCGCCGCTCGATCTCGGCGGCGGCCACGTCGTGCTGG
CCCGACGTTCGGCCGATGTCAGCGAGCTACGCCATTGATCAGCCGGCGCACCGTCCTTGGGCTCATGGCTTCGGCATTTC
TGCCGGGCACGTCGCGCGCCGGCGATCTGGAGCCGGAATTTCTTCAGCCGCAGTTGAAGGCCAGGGCGCTGCCGGCACTC
GCCGAACGCCTGCCCAAGAGCCCGCGCGCGTTGAATCTCGCTGCGATGGGCCGGCAGCCCGGCCAGTATGGCGGCACGCT
GCGCATGATCATCGGCAGCCAGAAAGATATCCGGATGATGACGATCTATGGGTATGCTCGCCTGGTCGGCTATGACGAAA
AGCTTAACATGCAACCCGACATTCTCGAAAGTTTCGACGTAGCGGATGATCGCGTCTTCACGTTCAAGATACGGGAAGGA
CATAAATGGTCTGACGGCAGCCTGCTGACGCCGGAGGATTTTCGCTATTGCTGGGAAGATGTCTGGCTGAACGATGAGCT
TTCGCAAGGCGGGCTCGCCCCGGCCCTGCTGGCGGACGGCAAGCCCCCACGCTTCGACATCGTCGATCCGTCGACGGTCC
GCTATAGTTGGGATGCGCCCAATCCCGACTTCCTGCCCAAGCTCGCTGCTGCATCGCCGCTATCGCTTGTTCTGCCGGCC
GCCTATCTCAAGCAGTTCCACAAGAAATACCAGGATCCATTCCGGCTCTCCGGCCTGATGACGGAGAACCGGGTCCACAA
ATGGACGCTTCTGCATATCCGCATGTCGCGGCAGTATCGCCCGGAGAACCCGGATCTGCCGACACTCGATCCCTGGCAGA
ACCGGACCAAGCCGCCGGCTGAGCAGTTCATTTTCGAGCGGAACCCGTTCTTTCATCGAATAGACGAGAATGGCCGGCAA
CTGCCCTATATTGACCGGGTTGTCATGGATGTCAGTTCGTCGGCGATCATTTCCGCCAAGACCGGTGCGGGCGAGAGCGA
CCTGCAAGGCATGGGAATTGACTTCTCCGACTACTCCTTCCTGAAGGATGCGGAGAAGCGCTACCCGGTGAAGTTGCATC
TCTGGAAACGCACACAGGGTTCGCGGCTGGCGCTGCTGCCCAATCTGAATTGTGCCGACCAGGTGTGGCGGGGCCTTTTT
CGTGACGTGCGCGTGCGCCGCGCACTTTCGCTCGCTGTGGACAGGCGCGAGATCAATTTGGCTGTGTTCTACGGATTGGC
GCAGGAAAGTGCCGATACAGTCCTGCCGGAGAGCCCGCTCTACCGGCCGGAATTCGCGAAAGCCTGGGTCGCCCATGATC
CCGACCAGGCCAATGCCCTGCTCGACGAGGTCGGGCTTCAGACGCGTGGCGATGACGGCCTGCGGATACTTCCCGACGGA
CGCCCGGCGCAGGTCATCGTGGAAACGGCCGGCGAGAGCACGTTGGAAACCGACGCGCTCGAACTCATCACCGATCACTG
GCGCAAGATCGGCATTGCCCTGTTCATCCGGACTTCGCAGCGCGACATCTTCCGCAGCCGCGCGCTTGGTGGCCAGATCA
TGATGTCGATGTGGTCGGGCATCGACAATGGCGTGCCGACCGCCGACATGAACCCGTACCAGTTGGCCCCCACCATCGAC
GACCAGCTGCAATGGCCGCTCTGGGGTGCTCACTACTTGTCTCACGGCACGCTCGGTGAGGCGCCCGATCTTCCGCCTGT
GGTCGAGTTGGTGGCTTTGCTCAAGCGCTGGAACGCATCGACCGAAGCCACGGAGCGTGCCGAAATCTGGAATTCAATGC
TGTCGATCTACACCGATCAGGTGTTTTCGATCGGCACGGTGAACGGAACGCTTCAGCCGGTTCTGGCGTCCTCGCGACTG
CGCAATCTGCCTGACAAGGCGCTCTACGGCTACGACCCGACCGCCTATTTCGGTGTCTACATGCCGGATACATTCTGGCT
TGGAGAGACCTGA

Upstream 100 bases:

>100_bases
CCTACACGCGCTCACTGGTCGCCGCGGTACCTTTCCCCGATCTCGACAGGCCGATGGATTTCAAGACGCTGAAGCTCAGC
GGCGCTTCCGACGCCAGCGC

Downstream 100 bases:

>100_bases
GCGTGTTTCGATATATTGTCTGGCGCATAGCCGTGATGGTTCCAACGCTGCTGATCATATCGGCGCTGGTGTTCACGATC
ATCGAACTTCCCCCGGGCGA

Product: oligopeptide ABC transporter, periplasmic oligopeptide-binding protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 670; Mature: 669

Protein sequence:

>670_residues
MGTAIPRRRRRGYAVAARSRRRPRRAGPTFGRCQRATPLISRRTVLGLMASAFLPGTSRAGDLEPEFLQPQLKARALPAL
AERLPKSPRALNLAAMGRQPGQYGGTLRMIIGSQKDIRMMTIYGYARLVGYDEKLNMQPDILESFDVADDRVFTFKIREG
HKWSDGSLLTPEDFRYCWEDVWLNDELSQGGLAPALLADGKPPRFDIVDPSTVRYSWDAPNPDFLPKLAAASPLSLVLPA
AYLKQFHKKYQDPFRLSGLMTENRVHKWTLLHIRMSRQYRPENPDLPTLDPWQNRTKPPAEQFIFERNPFFHRIDENGRQ
LPYIDRVVMDVSSSAIISAKTGAGESDLQGMGIDFSDYSFLKDAEKRYPVKLHLWKRTQGSRLALLPNLNCADQVWRGLF
RDVRVRRALSLAVDRREINLAVFYGLAQESADTVLPESPLYRPEFAKAWVAHDPDQANALLDEVGLQTRGDDGLRILPDG
RPAQVIVETAGESTLETDALELITDHWRKIGIALFIRTSQRDIFRSRALGGQIMMSMWSGIDNGVPTADMNPYQLAPTID
DQLQWPLWGAHYLSHGTLGEAPDLPPVVELVALLKRWNASTEATERAEIWNSMLSIYTDQVFSIGTVNGTLQPVLASSRL
RNLPDKALYGYDPTAYFGVYMPDTFWLGET

Sequences:

>Translated_670_residues
MGTAIPRRRRRGYAVAARSRRRPRRAGPTFGRCQRATPLISRRTVLGLMASAFLPGTSRAGDLEPEFLQPQLKARALPAL
AERLPKSPRALNLAAMGRQPGQYGGTLRMIIGSQKDIRMMTIYGYARLVGYDEKLNMQPDILESFDVADDRVFTFKIREG
HKWSDGSLLTPEDFRYCWEDVWLNDELSQGGLAPALLADGKPPRFDIVDPSTVRYSWDAPNPDFLPKLAAASPLSLVLPA
AYLKQFHKKYQDPFRLSGLMTENRVHKWTLLHIRMSRQYRPENPDLPTLDPWQNRTKPPAEQFIFERNPFFHRIDENGRQ
LPYIDRVVMDVSSSAIISAKTGAGESDLQGMGIDFSDYSFLKDAEKRYPVKLHLWKRTQGSRLALLPNLNCADQVWRGLF
RDVRVRRALSLAVDRREINLAVFYGLAQESADTVLPESPLYRPEFAKAWVAHDPDQANALLDEVGLQTRGDDGLRILPDG
RPAQVIVETAGESTLETDALELITDHWRKIGIALFIRTSQRDIFRSRALGGQIMMSMWSGIDNGVPTADMNPYQLAPTID
DQLQWPLWGAHYLSHGTLGEAPDLPPVVELVALLKRWNASTEATERAEIWNSMLSIYTDQVFSIGTVNGTLQPVLASSRL
RNLPDKALYGYDPTAYFGVYMPDTFWLGET
>Mature_669_residues
GTAIPRRRRRGYAVAARSRRRPRRAGPTFGRCQRATPLISRRTVLGLMASAFLPGTSRAGDLEPEFLQPQLKARALPALA
ERLPKSPRALNLAAMGRQPGQYGGTLRMIIGSQKDIRMMTIYGYARLVGYDEKLNMQPDILESFDVADDRVFTFKIREGH
KWSDGSLLTPEDFRYCWEDVWLNDELSQGGLAPALLADGKPPRFDIVDPSTVRYSWDAPNPDFLPKLAAASPLSLVLPAA
YLKQFHKKYQDPFRLSGLMTENRVHKWTLLHIRMSRQYRPENPDLPTLDPWQNRTKPPAEQFIFERNPFFHRIDENGRQL
PYIDRVVMDVSSSAIISAKTGAGESDLQGMGIDFSDYSFLKDAEKRYPVKLHLWKRTQGSRLALLPNLNCADQVWRGLFR
DVRVRRALSLAVDRREINLAVFYGLAQESADTVLPESPLYRPEFAKAWVAHDPDQANALLDEVGLQTRGDDGLRILPDGR
PAQVIVETAGESTLETDALELITDHWRKIGIALFIRTSQRDIFRSRALGGQIMMSMWSGIDNGVPTADMNPYQLAPTIDD
QLQWPLWGAHYLSHGTLGEAPDLPPVVELVALLKRWNASTEATERAEIWNSMLSIYTDQVFSIGTVNGTLQPVLASSRLR
NLPDKALYGYDPTAYFGVYMPDTFWLGET

Specific function: Probably involved in an alpha-galactosides intake transport system [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

None

Paralogues:

None

Copy number: 660 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 75667; Mature: 75536

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTAIPRRRRRGYAVAARSRRRPRRAGPTFGRCQRATPLISRRTVLGLMASAFLPGTSRA
CCCCCCCHHHCCCEEEHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
GDLEPEFLQPQLKARALPALAERLPKSPRALNLAAMGRQPGQYGGTLRMIIGSQKDIRMM
CCCCHHHHCHHHHHHHHHHHHHHCCCCCCEEEHHHHCCCCCCCCCEEEEEECCCCCEEEE
TIYGYARLVGYDEKLNMQPDILESFDVADDRVFTFKIREGHKWSDGSLLTPEDFRYCWED
EEEEEHHHCCCCHHCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHH
VWLNDELSQGGLAPALLADGKPPRFDIVDPSTVRYSWDAPNPDFLPKLAAASPLSLVLPA
HCCCCCCCCCCCCCHHHCCCCCCEEECCCCCEEEEECCCCCCCHHHHHHCCCCHHHHHHH
AYLKQFHKKYQDPFRLSGLMTENRVHKWTLLHIRMSRQYRPENPDLPTLDPWQNRTKPPA
HHHHHHHHHHCCCHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCH
EQFIFERNPFFHRIDENGRQLPYIDRVVMDVSSSAIISAKTGAGESDLQGMGIDFSDYSF
HHHHCCCCCCEEECCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHH
LKDAEKRYPVKLHLWKRTQGSRLALLPNLNCADQVWRGLFRDVRVRRALSLAVDRREINL
HHHHHHCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE
AVFYGLAQESADTVLPESPLYRPEFAKAWVAHDPDQANALLDEVGLQTRGDDGLRILPDG
EEEEEEHHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEECCCC
RPAQVIVETAGESTLETDALELITDHWRKIGIALFIRTSQRDIFRSRALGGQIMMSMWSG
CCCEEEEEECCCCHHHHHHHHHHHHHHHHEEEEEEEECCHHHHHHHHHCCHHHHHHHHCC
IDNGVPTADMNPYQLAPTIDDQLQWPLWGAHYLSHGTLGEAPDLPPVVELVALLKRWNAS
CCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCC
TEATERAEIWNSMLSIYTDQVFSIGTVNGTLQPVLASSRLRNLPDKALYGYDPTAYFGVY
CHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCCCHHCCCCCCCEEEEEE
MPDTFWLGET
CCCEEECCCC
>Mature Secondary Structure 
GTAIPRRRRRGYAVAARSRRRPRRAGPTFGRCQRATPLISRRTVLGLMASAFLPGTSRA
CCCCCCHHHCCCEEEHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
GDLEPEFLQPQLKARALPALAERLPKSPRALNLAAMGRQPGQYGGTLRMIIGSQKDIRMM
CCCCHHHHCHHHHHHHHHHHHHHCCCCCCEEEHHHHCCCCCCCCCEEEEEECCCCCEEEE
TIYGYARLVGYDEKLNMQPDILESFDVADDRVFTFKIREGHKWSDGSLLTPEDFRYCWED
EEEEEHHHCCCCHHCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHH
VWLNDELSQGGLAPALLADGKPPRFDIVDPSTVRYSWDAPNPDFLPKLAAASPLSLVLPA
HCCCCCCCCCCCCCHHHCCCCCCEEECCCCCEEEEECCCCCCCHHHHHHCCCCHHHHHHH
AYLKQFHKKYQDPFRLSGLMTENRVHKWTLLHIRMSRQYRPENPDLPTLDPWQNRTKPPA
HHHHHHHHHHCCCHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCH
EQFIFERNPFFHRIDENGRQLPYIDRVVMDVSSSAIISAKTGAGESDLQGMGIDFSDYSF
HHHHCCCCCCEEECCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHH
LKDAEKRYPVKLHLWKRTQGSRLALLPNLNCADQVWRGLFRDVRVRRALSLAVDRREINL
HHHHHHCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE
AVFYGLAQESADTVLPESPLYRPEFAKAWVAHDPDQANALLDEVGLQTRGDDGLRILPDG
EEEEEEHHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEECCCC
RPAQVIVETAGESTLETDALELITDHWRKIGIALFIRTSQRDIFRSRALGGQIMMSMWSG
CCCEEEEEECCCCHHHHHHHHHHHHHHHHEEEEEEEECCHHHHHHHHHCCHHHHHHHHCC
IDNGVPTADMNPYQLAPTIDDQLQWPLWGAHYLSHGTLGEAPDLPPVVELVALLKRWNAS
CCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCC
TEATERAEIWNSMLSIYTDQVFSIGTVNGTLQPVLASSRLRNLPDKALYGYDPTAYFGVY
CHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCCCHHCCCCCCCEEEEEE
MPDTFWLGET
CCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9791127; 11481431 [H]