Click here to switch to the map view.

The map label for this gene is 13472833

Identifier: 13472833

GI number: 13472833

Start: 2601748

End: 2602956

Strand: Direct

Name: 13472833

Synonym: mlr3252

Alternate gene names: NA

Gene position: 2601748-2602956 (Clockwise)

Preceding gene: 13472832

Following gene: 13472835

Centisome position: 36.98

GC content: 61.21

Gene sequence:

>1209_bases
GTGGCGGGTCGCCGAATGAAGCGGCTGCGCGCTTTCTTCTATGTCCAGCACCTGCTCGGCATCGGCCATCTCGCACGCGC
CAGCCGCATTGCGGCCGCTCTGGCCGATGACGGGTTTGACATAACCGTCGTGACCGGCGGGCCGCCGATCGCGGGGTTTC
CGGGACAGGGGGTAAAATCTGTAACCCTGCCACCTGTCACTTCCGGCGATAATGGATTTTCCGGACTTGTCGACCTGCAA
GGCAAACCCATCGACGATGATTTCAAGAAACGGCGTTCAGAGATGCTGCTGCAGGCATTCCGGGATTGCAGGCCTGATAT
CGTCATTGTCGAGGCGTTTCCGTTTGGACGCCGGCAGATGCGTTTCGAACTCTTGCCGCTGCTCGAGACCATCGAAGCGA
CGTCGCCCAGACCGCTGCTGGCGACGTCCGTCCGGGATATTCTTCAGGAGCGCGTCAAGCCGGGCCGAAACGAGGAAACG
GTCGATCTCATCAACAGGCATTTCGACCTTGTAATGGTCCACGGTGATCCGGCTTTCACAACCATCGACAAGACATTTCC
ACTGGCTGGGGCGATCACGGCCGAGGTCACCTACACAGGGCTCGTCGGCGCGCCGCCATCGCCTGCGGCCGCCGAGCGTT
TCGACATTCTGGTGTCGGTTGGCGGCGGGGCGGCCGGAAGGAGGCTTGTCAGTTCCACCCTCGCAGCGGCGCGGATTGCC
AACGGTTGGAAATGGTGTTTGATCACCGGCCCAAACCTGCCGAAAGACGAGTTTGATGTGATCGCATGCGATGCCACGCC
GGGCCTGTCCATCTTCCGTTTCCGCGAGGATTTTGCCAGCCTGTTGACCGGCGCCCGCCTGTCAGTCTCGCAGGCGGGTT
ACAACACGGTCTGCGATGTACTGCGCGCGGGTTGTCGCTCCCTGCTGGTTCCATTTGCGGCCGGCGGAGAAACCGAACAG
ACGGTTCGCGCCCTGATGCTGGAAGAGCTCGGTCTTGCAACGGTGCTGACAGAAAATGACCTGACGCCTGACGGCTTGGC
GCAAGCGATCGAGCAGGCGCTTGCGGGACCGACGCCATCCGCGCATCGGCTCGACCTGGAAGGTGCGCGTCACTCCGCGC
AAATCCTGCGCGAACGGTATCGAACATGGTCCCTAAAAATGGGGTCCGGTTTCGGAAAGGAACATGATCAAACAGACGAT
GGGTCCTAG

Upstream 100 bases:

>100_bases
CGCTGCGCGCCCGTCTCGGTGACGCCGCAGAGCGGCGCGTGCGCGACAATTTCAATCATATGGCAAGCATTGGACAGCTC
AAGGAACTGTTCGAGCGGGA

Downstream 100 bases:

>100_bases
ACTGTTCATCGGCTTTAACGCGCATCGTGTCTGGCGAGTACGACGCACTTCAAGTCCTTGTTTTATGTCGTTGTCCCAAA
ATCGCTGCGCACTTTTGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MAGRRMKRLRAFFYVQHLLGIGHLARASRIAAALADDGFDITVVTGGPPIAGFPGQGVKSVTLPPVTSGDNGFSGLVDLQ
GKPIDDDFKKRRSEMLLQAFRDCRPDIVIVEAFPFGRRQMRFELLPLLETIEATSPRPLLATSVRDILQERVKPGRNEET
VDLINRHFDLVMVHGDPAFTTIDKTFPLAGAITAEVTYTGLVGAPPSPAAAERFDILVSVGGGAAGRRLVSSTLAAARIA
NGWKWCLITGPNLPKDEFDVIACDATPGLSIFRFREDFASLLTGARLSVSQAGYNTVCDVLRAGCRSLLVPFAAGGETEQ
TVRALMLEELGLATVLTENDLTPDGLAQAIEQALAGPTPSAHRLDLEGARHSAQILRERYRTWSLKMGSGFGKEHDQTDD
GS

Sequences:

>Translated_402_residues
MAGRRMKRLRAFFYVQHLLGIGHLARASRIAAALADDGFDITVVTGGPPIAGFPGQGVKSVTLPPVTSGDNGFSGLVDLQ
GKPIDDDFKKRRSEMLLQAFRDCRPDIVIVEAFPFGRRQMRFELLPLLETIEATSPRPLLATSVRDILQERVKPGRNEET
VDLINRHFDLVMVHGDPAFTTIDKTFPLAGAITAEVTYTGLVGAPPSPAAAERFDILVSVGGGAAGRRLVSSTLAAARIA
NGWKWCLITGPNLPKDEFDVIACDATPGLSIFRFREDFASLLTGARLSVSQAGYNTVCDVLRAGCRSLLVPFAAGGETEQ
TVRALMLEELGLATVLTENDLTPDGLAQAIEQALAGPTPSAHRLDLEGARHSAQILRERYRTWSLKMGSGFGKEHDQTDD
GS
>Mature_401_residues
AGRRMKRLRAFFYVQHLLGIGHLARASRIAAALADDGFDITVVTGGPPIAGFPGQGVKSVTLPPVTSGDNGFSGLVDLQG
KPIDDDFKKRRSEMLLQAFRDCRPDIVIVEAFPFGRRQMRFELLPLLETIEATSPRPLLATSVRDILQERVKPGRNEETV
DLINRHFDLVMVHGDPAFTTIDKTFPLAGAITAEVTYTGLVGAPPSPAAAERFDILVSVGGGAAGRRLVSSTLAAARIAN
GWKWCLITGPNLPKDEFDVIACDATPGLSIFRFREDFASLLTGARLSVSQAGYNTVCDVLRAGCRSLLVPFAAGGETEQT
VRALMLEELGLATVLTENDLTPDGLAQAIEQALAGPTPSAHRLDLEGARHSAQILRERYRTWSLKMGSGFGKEHDQTDDG
S

Specific function: Unknown

COG id: COG4671

COG function: function code R; Predicted glycosyl transferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43348; Mature: 43217

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGRRMKRLRAFFYVQHLLGIGHLARASRIAAALADDGFDITVVTGGPPIAGFPGQGVKS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCE
VTLPPVTSGDNGFSGLVDLQGKPIDDDFKKRRSEMLLQAFRDCRPDIVIVEAFPFGRRQM
EECCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHH
RFELLPLLETIEATSPRPLLATSVRDILQERVKPGRNEETVDLINRHFDLVMVHGDPAFT
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEEEEEECCCCEE
TIDKTFPLAGAITAEVTYTGLVGAPPSPAAAERFDILVSVGGGAAGRRLVSSTLAAARIA
EECCCCCCCCEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHC
NGWKWCLITGPNLPKDEFDVIACDATPGLSIFRFREDFASLLTGARLSVSQAGYNTVCDV
CCEEEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHH
LRAGCRSLLVPFAAGGETEQTVRALMLEELGLATVLTENDLTPDGLAQAIEQALAGPTPS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCC
AHRLDLEGARHSAQILRERYRTWSLKMGSGFGKEHDQTDDGS
CEEEECCCCHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGRRMKRLRAFFYVQHLLGIGHLARASRIAAALADDGFDITVVTGGPPIAGFPGQGVKS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCE
VTLPPVTSGDNGFSGLVDLQGKPIDDDFKKRRSEMLLQAFRDCRPDIVIVEAFPFGRRQM
EECCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHH
RFELLPLLETIEATSPRPLLATSVRDILQERVKPGRNEETVDLINRHFDLVMVHGDPAFT
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEEEEEECCCCEE
TIDKTFPLAGAITAEVTYTGLVGAPPSPAAAERFDILVSVGGGAAGRRLVSSTLAAARIA
EECCCCCCCCEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHC
NGWKWCLITGPNLPKDEFDVIACDATPGLSIFRFREDFASLLTGARLSVSQAGYNTVCDV
CCEEEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHH
LRAGCRSLLVPFAAGGETEQTVRALMLEELGLATVLTENDLTPDGLAQAIEQALAGPTPS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCC
AHRLDLEGARHSAQILRERYRTWSLKMGSGFGKEHDQTDDGS
CEEEECCCCHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA