Click here to switch to the map view.

The map label for this gene is arcB [H]

Identifier: 13472795

GI number: 13472795

Start: 2563233

End: 2564198

Strand: Direct

Name: arcB [H]

Synonym: mlr3204

Alternate gene names: 13472795

Gene position: 2563233-2564198 (Clockwise)

Preceding gene: 13472794

Following gene: 13472800

Centisome position: 36.43

GC content: 66.56

Gene sequence:

>966_bases
ATGCTGACCATTTCGGCCGCCGAGGTCGATCGTGCATTGACCTTTCCCGGACTGGTCGAGACGTTGCGCACGGCATTCCG
TGAGGGCGCAGTGCAGCCGGTCAGGCATCATCACGCTGTCGAACGGCCCGATGGTGCGGCCTCGACCTTGCTGCTGATGC
CGGCATGGACCGATTTCAACGCCGCCGGCACGTCTTCCGGTGGCCATATCGGCGTCAAGATCGTCACCGTCTCGCCCGAC
AACAACGCCATCGGCAAGCCCGCCGTGATGGGGCTCTATCTCCTGCTCAATGGCGCCACCGGCGAACCGGAAGCCCTGAT
CGACGGCCAGCGGCTGACGCAGTGGCGCACCGCCTGCGCCTCGGCGCTGGCGGCATCCTACCTCGCCCGCGACGATGCTT
CGCGGCTGCTTGTGGTCGGCGCCGGTGCCCTGTCGCCGTTCCTGGCCAAGGCACATTCGGCCGTACGGCCGATCAAAACC
ATCCGCATCTGGAACCGCACCCCGGCAAACGCAGAGAAGGTCGCGGCCGATTTGCGCACCGACGGCTTTGCGGCCAGCGC
CGCTTCCGATCTGGATGCGGAGCTTGGCGAGGCCGATATCGTCTCCTCGGCGACAATCACCACCACGCCGCTGATCAAGG
GCACGCTGTTGCGACCAGGCACCCATATCGACCTGGTCGGCGGCTTCACCCCGACGATGCGTGAAAGTGATGACGACGCC
ATCGTGCGCGCCCGCGTCTATGTCGACACACGCGCCGGCGCTACCAAAGAAGCCGGCGACATCGTCCAGCCGCTGGCCTC
CGGCGTGCTGAAGCCGGACGCCATCGTCGCCGACCTGCACGAACTGGCGCGCGGCCAGGGCGAAGGTCGCCGAAGCGCTG
ACGAGATCACGCTGTTCAAGTCGGTTGGCGCGGCACTCGAGGACCTCGCCGCCGGCATTGCCGTCTACAAGGCTCTCAAG
CCGTAG

Upstream 100 bases:

>100_bases
ATCAGTTCAGGGATCGGTCCAAGGGTCGACCCAAGGGTCGGCATTGCCAAAGCCGACCAATTAAGCCGACCCCGGTGCCT
TTCGTTCCACGGAGCCTTTC

Downstream 100 bases:

>100_bases
CCTCGGCAAGCGTCTTCGGGGCACCCATCGCCTCTGCGATCAGACGAAAATCGTGATCGGTGATTTCGAACAGGCCGAAG
CGCAGGTGATACCCCCAGTT

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: OCD [H]

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MLTISAAEVDRALTFPGLVETLRTAFREGAVQPVRHHHAVERPDGAASTLLLMPAWTDFNAAGTSSGGHIGVKIVTVSPD
NNAIGKPAVMGLYLLLNGATGEPEALIDGQRLTQWRTACASALAASYLARDDASRLLVVGAGALSPFLAKAHSAVRPIKT
IRIWNRTPANAEKVAADLRTDGFAASAASDLDAELGEADIVSSATITTTPLIKGTLLRPGTHIDLVGGFTPTMRESDDDA
IVRARVYVDTRAGATKEAGDIVQPLASGVLKPDAIVADLHELARGQGEGRRSADEITLFKSVGAALEDLAAGIAVYKALK
P

Sequences:

>Translated_321_residues
MLTISAAEVDRALTFPGLVETLRTAFREGAVQPVRHHHAVERPDGAASTLLLMPAWTDFNAAGTSSGGHIGVKIVTVSPD
NNAIGKPAVMGLYLLLNGATGEPEALIDGQRLTQWRTACASALAASYLARDDASRLLVVGAGALSPFLAKAHSAVRPIKT
IRIWNRTPANAEKVAADLRTDGFAASAASDLDAELGEADIVSSATITTTPLIKGTLLRPGTHIDLVGGFTPTMRESDDDA
IVRARVYVDTRAGATKEAGDIVQPLASGVLKPDAIVADLHELARGQGEGRRSADEITLFKSVGAALEDLAAGIAVYKALK
P
>Mature_321_residues
MLTISAAEVDRALTFPGLVETLRTAFREGAVQPVRHHHAVERPDGAASTLLLMPAWTDFNAAGTSSGGHIGVKIVTVSPD
NNAIGKPAVMGLYLLLNGATGEPEALIDGQRLTQWRTACASALAASYLARDDASRLLVVGAGALSPFLAKAHSAVRPIKT
IRIWNRTPANAEKVAADLRTDGFAASAASDLDAELGEADIVSSATITTTPLIKGTLLRPGTHIDLVGGFTPTMRESDDDA
IVRARVYVDTRAGATKEAGDIVQPLASGVLKPDAIVADLHELARGQGEGRRSADEITLFKSVGAALEDLAAGIAVYKALK
P

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI4503065, Length=322, Percent_Identity=31.9875776397516, Blast_Score=126, Evalue=2e-29,
Organism=Homo sapiens, GI62241008, Length=287, Percent_Identity=32.0557491289199, Blast_Score=122, Evalue=5e-28,
Organism=Drosophila melanogaster, GI24642678, Length=327, Percent_Identity=27.5229357798165, Blast_Score=78, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 33467; Mature: 33467

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTISAAEVDRALTFPGLVETLRTAFREGAVQPVRHHHAVERPDGAASTLLLMPAWTDFN
CEEECHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCC
AAGTSSGGHIGVKIVTVSPDNNAIGKPAVMGLYLLLNGATGEPEALIDGQRLTQWRTACA
CCCCCCCCEEEEEEEEECCCCCCCCCHHHHEEEHEEECCCCCCHHHCCCHHHHHHHHHHH
SALAASYLARDDASRLLVVGAGALSPFLAKAHSAVRPIKTIRIWNRTPANAEKVAADLRT
HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHC
DGFAASAASDLDAELGEADIVSSATITTTPLIKGTLLRPGTHIDLVGGFTPTMRESDDDA
CCCHHHHHCHHHHHCCCHHHCCCCEEEECCCCCCEEECCCCEEEEECCCCCCCCCCCCCE
IVRARVYVDTRAGATKEAGDIVQPLASGVLKPDAIVADLHELARGQGEGRRSADEITLFK
EEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHH
SVGAALEDLAAGIAVYKALKP
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLTISAAEVDRALTFPGLVETLRTAFREGAVQPVRHHHAVERPDGAASTLLLMPAWTDFN
CEEECHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCC
AAGTSSGGHIGVKIVTVSPDNNAIGKPAVMGLYLLLNGATGEPEALIDGQRLTQWRTACA
CCCCCCCCEEEEEEEEECCCCCCCCCHHHHEEEHEEECCCCCCHHHCCCHHHHHHHHHHH
SALAASYLARDDASRLLVVGAGALSPFLAKAHSAVRPIKTIRIWNRTPANAEKVAADLRT
HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHC
DGFAASAASDLDAELGEADIVSSATITTTPLIKGTLLRPGTHIDLVGGFTPTMRESDDDA
CCCHHHHHCHHHHHCCCHHHCCCCEEEECCCCCCEEECCCCEEEEECCCCCCCCCCCCCE
IVRARVYVDTRAGATKEAGDIVQPLASGVLKPDAIVADLHELARGQGEGRRSADEITLFK
EEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHH
SVGAALEDLAAGIAVYKALKP
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3281832; 8045881; 11743193; 11743194 [H]