| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13472749
Identifier: 13472749
GI number: 13472749
Start: 2523496
End: 2524485
Strand: Direct
Name: 13472749
Synonym: mlr3148
Alternate gene names: NA
Gene position: 2523496-2524485 (Clockwise)
Preceding gene: 13472748
Following gene: 13472750
Centisome position: 35.87
GC content: 62.83
Gene sequence:
>990_bases ATGAAACGTATCGTTCTCGGCCTCCTGGCCGCAACCGCAATGGTTCTTCCGGCTTTCGCCGCGGATGTCCAGCCGGCCAT CCTCTATGATCTGGGCGGCAAGTTCGACAAATCCTTCAACGAGGCTGCCTTCCATGGCGCCGAGAAGTTCAAGACCGAGA CCGGCACGCCCTATGTCGAGTTCGAAGTGTCCAACGCCTCGCAGCGCGAGCAGGCGCTGCGCCGCTTCGCCGAGGACGGC CACAACCCGATCGTCATGGCCGGCTTCGCCTGGGAGGATGCGCTGAAGAAGGTCGCGGCCGAATATCCCGATCTCAACTT CGCCATCATCGACGATGCCGTCGACCTGCCCAACGTCCGCTCGCTGGTGTTCAAGGAGAATGAAGGCTCCTACCTCGTCG GCATCATGGCCGCGATGGCATCGAAGTCGAAGAAGGTCTCCTTCATCGGCGGCATGGACATCCCGCTGATCCGCAAGTTC GAATGCGGCTATGTCGGCGGCGCCAAGTCGGCCGGCGCGACCGACGTCATCCAGAATATGACCGGCGACACCCCGGCTGC CTGGAACGATCCGGCCAAGGGCGGCGAAATCGCCAAGACGCAGATCGACCAGGGCTCCGACGTGGTCTACGCCGCGGCCG GCGGCACCGGCGTCGGTGTGCTGCAGGCGGCGGCTGATGCCGGCAAGCTCGGCATTGGCGTCGATTCCAACCAGAATGGC CTGCAGCCCGGCAAGGTGCTGACCTCGATGATGAAGCGCGTCGACGTTGCCGTCTACACCGCCTTCATGGATGGCAAGAA CGGCACCTTCAAGGGTGGCGTCGAGAATCTCGGCCTCAAGGAAGGCGGCGTCGACTACGCCATGGACGACAACAACAAGG CACTGGTGACCGACGAGATGAAGGCTGCCGTGGAAAAGGCCAAGGCCGACATCATCGCCGGCAAGATCCAGGTGCACGAC TACACGACCGACAACGCCTGCCCGTATTGA
Upstream 100 bases:
>100_bases GGGAGGGGAATACACTCCTGGCTGACGTCGCATGCCGGCCGCAGAACCGGGCAGGCAGGCGGGGCGTAACGGAAAAAATA ACCGACAGGGTGTGGATCAC
Downstream 100 bases:
>100_bases TCGGAAGATACTGATTTGCGAACCGCCGGGCCTTGTCCCGGCGGTTTTGTTTTTGGAAGACTCTGACGGACGAGCACCGA GGCTGGAGTGACGCCGATCA
Product: membrane lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MKRIVLGLLAATAMVLPAFAADVQPAILYDLGGKFDKSFNEAAFHGAEKFKTETGTPYVEFEVSNASQREQALRRFAEDG HNPIVMAGFAWEDALKKVAAEYPDLNFAIIDDAVDLPNVRSLVFKENEGSYLVGIMAAMASKSKKVSFIGGMDIPLIRKF ECGYVGGAKSAGATDVIQNMTGDTPAAWNDPAKGGEIAKTQIDQGSDVVYAAAGGTGVGVLQAAADAGKLGIGVDSNQNG LQPGKVLTSMMKRVDVAVYTAFMDGKNGTFKGGVENLGLKEGGVDYAMDDNNKALVTDEMKAAVEKAKADIIAGKIQVHD YTTDNACPY
Sequences:
>Translated_329_residues MKRIVLGLLAATAMVLPAFAADVQPAILYDLGGKFDKSFNEAAFHGAEKFKTETGTPYVEFEVSNASQREQALRRFAEDG HNPIVMAGFAWEDALKKVAAEYPDLNFAIIDDAVDLPNVRSLVFKENEGSYLVGIMAAMASKSKKVSFIGGMDIPLIRKF ECGYVGGAKSAGATDVIQNMTGDTPAAWNDPAKGGEIAKTQIDQGSDVVYAAAGGTGVGVLQAAADAGKLGIGVDSNQNG LQPGKVLTSMMKRVDVAVYTAFMDGKNGTFKGGVENLGLKEGGVDYAMDDNNKALVTDEMKAAVEKAKADIIAGKIQVHD YTTDNACPY >Mature_329_residues MKRIVLGLLAATAMVLPAFAADVQPAILYDLGGKFDKSFNEAAFHGAEKFKTETGTPYVEFEVSNASQREQALRRFAEDG HNPIVMAGFAWEDALKKVAAEYPDLNFAIIDDAVDLPNVRSLVFKENEGSYLVGIMAAMASKSKKVSFIGGMDIPLIRKF ECGYVGGAKSAGATDVIQNMTGDTPAAWNDPAKGGEIAKTQIDQGSDVVYAAAGGTGVGVLQAAADAGKLGIGVDSNQNG LQPGKVLTSMMKRVDVAVYTAFMDGKNGTFKGGVENLGLKEGGVDYAMDDNNKALVTDEMKAAVEKAKADIIAGKIQVHD YTTDNACPY
Specific function: Unknown
COG id: COG1744
COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BMP lipoprotein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003760 [H]
Pfam domain/function: PF02608 Bmp [H]
EC number: NA
Molecular weight: Translated: 34755; Mature: 34755
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIVLGLLAATAMVLPAFAADVQPAILYDLGGKFDKSFNEAAFHGAEKFKTETGTPYVE CHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHCHHHHCCCCCCEEEE FEVSNASQREQALRRFAEDGHNPIVMAGFAWEDALKKVAAEYPDLNFAIIDDAVDLPNVR EEECCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCCCCE SLVFKENEGSYLVGIMAAMASKSKKVSFIGGMDIPLIRKFECGYVGGAKSAGATDVIQNM EEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHC TGDTPAAWNDPAKGGEIAKTQIDQGSDVVYAAAGGTGVGVLQAAADAGKLGIGVDSNQNG CCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHCCCCCEEECCCCCCCC LQPGKVLTSMMKRVDVAVYTAFMDGKNGTFKGGVENLGLKEGGVDYAMDDNNKALVTDEM CCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEHHHH KAAVEKAKADIIAGKIQVHDYTTDNACPY HHHHHHHHHHEEEEEEEEEEECCCCCCCC >Mature Secondary Structure MKRIVLGLLAATAMVLPAFAADVQPAILYDLGGKFDKSFNEAAFHGAEKFKTETGTPYVE CHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHCHHHHCCCCCCEEEE FEVSNASQREQALRRFAEDGHNPIVMAGFAWEDALKKVAAEYPDLNFAIIDDAVDLPNVR EEECCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCCCCE SLVFKENEGSYLVGIMAAMASKSKKVSFIGGMDIPLIRKFECGYVGGAKSAGATDVIQNM EEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHC TGDTPAAWNDPAKGGEIAKTQIDQGSDVVYAAAGGTGVGVLQAAADAGKLGIGVDSNQNG CCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHCCCCCEEECCCCCCCC LQPGKVLTSMMKRVDVAVYTAFMDGKNGTFKGGVENLGLKEGGVDYAMDDNNKALVTDEM CCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEHHHH KAAVEKAKADIIAGKIQVHDYTTDNACPY HHHHHHHHHHEEEEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA