Click here to switch to the map view.

The map label for this gene is ycjJ [C]

Identifier: 13472699

GI number: 13472699

Start: 2478050

End: 2479606

Strand: Reverse

Name: ycjJ [C]

Synonym: mll3075

Alternate gene names: 13472699

Gene position: 2479606-2478050 (Counterclockwise)

Preceding gene: 13472700

Following gene: 13472698

Centisome position: 35.24

GC content: 63.01

Gene sequence:

>1557_bases
ATGGCAGCACCGGGTTATACAGACGTTGACAAGGCGGAGGACGTAAAGGCCCTCCACAGCATGGGCTACGCCCAGGAACT
GGAGCGGCGCCTCAGCCGCTTTTCGAATTTCGCGGTTTCCTTCTCCATCATCTGCATCCTGTCGGGCGGCATCAATTCAC
TGGCGCAAGCCACCTCCGGCGCCGGCGGCATCGGCATCGGCATCGGCTGGCTGGTCGGCTGCTTCGTGTCGCTAACCTTC
GCGGTGGCCATGTCGCAGATCAGCTCGGCCTATCCGACGGCCGGCGGCCTCTATCACTGGGGTTCGATCCTCGGCAACCG
CGGCACCGGCTGGGTGACGGCCTGGCTCAACCTGCTTGGCCTGATCACCGTGCTCGGCGCCATCAATGTCGGCACCTGGA
CGTTCTTCATCGGCGCCTTCGGACCTGCGCTGGGAATTGACGGTTCGCTGACCAACCAGATGATCTTCCTGGTCGTGGTC
ACCGGTCTCCAGGCGTTGATCAACCATCTCGGCATCAAGCTGACGGCAAAGCTGACCGACTTCTCGGGCTATTTGATCTT
CTTCGGCGCTATCCTGATCGCGGTCGTCTGCCTGATTTTCGCCGAGCATTGGGATGTCAGCCGTCTCTTCACCTTCCACA
ATTATTCCGGTGACGCTGGCGGCGGTGTCTGGCCGTCGGTTTCGAATGCCTGGGTGTTCGCGCTCGGCCTGTTGCTGCCG
ATCTATACGATCACCGGCTACGACGCTTCCGCGCACACATCGGAAGAAACCATCAAGGCGGCCTCTTCCGTGCCGCGCGC
CATGGTCATGTCGGTCGTCTGGTCGGCCCTCTTCGGCTATCTGTTCCTGGCTGCTTTCGTGCTGATGATCCCGAACATGG
ACGATGCCGCCAAGCAGGGCTGGAACGTGTTCTTCTGGGCCTTCGACCAGCGCGTTCCCTCCGGCATCAAGGAGTTCGTC
TATCTCGTCGTGTTCGTATCGCAGTTGCTGTGCGGTCTCGCCACGGTGACGTCGGCCTCGCGCATGATCTTTGCCTTCTC
GCGCGACGGCGGCCTGCCCGGCTCGGCGGCGCTCGCCAAGGTCAGCCCGACCTACCGCACGCCTGTGGCGGCGATCTGGA
CGGCGTCGATCCTGTCGGTGCTGTTCGTCTGGGGCTCGACGCTGGTTTCGGTCGCCGGCACCTCGGCCTACACCATAGTG
GTGTCGTGCACCGTCATCTTCCTGTTCCTGTCCTTCACCGTGCCGATCGTGCTCGGCATGCTGGCCTGGGGCACGCCGAA
GTGGGACAAGATGGGCCCGTGGAACATGGGGCGCGGCGTGTTCATGCTGTTTGCCGTCCTGTCGATCGTGTCGATGATCC
TGATCTTCGTCATCGGCATCCAGCCGCCGAACGACTGGGCGCTCTACATCACCGTAGGCTTCTTCATCCTGACGGCGATC
GTCTGGTTCGCCTTCGAGCGCAACCGCTTCCAGGGCCCGCCGCTCGGCGACATCATCGCGGCGCGCCAGGCGGCGATCAA
GGCAGCGGAACAGGCGGTCGGCGAAACCGGCAACTGA

Upstream 100 bases:

>100_bases
TTTTTCGGATCTGGAACCTGAGGAGGCCACGCGGCCCAGATCGCATTCAGTCAGAAAGTCAGTCCAATCGGCCAGCTGAG
AAACAAACAGGGGACTTCCA

Downstream 100 bases:

>100_bases
CTTCTCCCATCAAGGCCATGGCCGGCATCGTGCCGGCCATGGTTTCGTTTATCCCTTTCAATGACCAAGCGCTGGAGTGC
CAAAGGAATGGCCGGAAATT

Product: amino acid/metabolite permease

Products: NA

Alternate protein names: Amino Acid Permease; Amino Acid/Metabolite Permease; Amino Acid Transporter; Amino-Acid Permease; Amino Acid Permease Family Protein; Amino Acid Transporter Protein; Permease Urea Carboxylase System; Amino Acid Transporter-Like Protein; Amino Acid Permease APC Family; Transporter Transmembrane Subunit; Amino Acid Permease Protein; Amino Acid/Metabolite Transporter; Permease Protein

Number of amino acids: Translated: 518; Mature: 517

Protein sequence:

>518_residues
MAAPGYTDVDKAEDVKALHSMGYAQELERRLSRFSNFAVSFSIICILSGGINSLAQATSGAGGIGIGIGWLVGCFVSLTF
AVAMSQISSAYPTAGGLYHWGSILGNRGTGWVTAWLNLLGLITVLGAINVGTWTFFIGAFGPALGIDGSLTNQMIFLVVV
TGLQALINHLGIKLTAKLTDFSGYLIFFGAILIAVVCLIFAEHWDVSRLFTFHNYSGDAGGGVWPSVSNAWVFALGLLLP
IYTITGYDASAHTSEETIKAASSVPRAMVMSVVWSALFGYLFLAAFVLMIPNMDDAAKQGWNVFFWAFDQRVPSGIKEFV
YLVVFVSQLLCGLATVTSASRMIFAFSRDGGLPGSAALAKVSPTYRTPVAAIWTASILSVLFVWGSTLVSVAGTSAYTIV
VSCTVIFLFLSFTVPIVLGMLAWGTPKWDKMGPWNMGRGVFMLFAVLSIVSMILIFVIGIQPPNDWALYITVGFFILTAI
VWFAFERNRFQGPPLGDIIAARQAAIKAAEQAVGETGN

Sequences:

>Translated_518_residues
MAAPGYTDVDKAEDVKALHSMGYAQELERRLSRFSNFAVSFSIICILSGGINSLAQATSGAGGIGIGIGWLVGCFVSLTF
AVAMSQISSAYPTAGGLYHWGSILGNRGTGWVTAWLNLLGLITVLGAINVGTWTFFIGAFGPALGIDGSLTNQMIFLVVV
TGLQALINHLGIKLTAKLTDFSGYLIFFGAILIAVVCLIFAEHWDVSRLFTFHNYSGDAGGGVWPSVSNAWVFALGLLLP
IYTITGYDASAHTSEETIKAASSVPRAMVMSVVWSALFGYLFLAAFVLMIPNMDDAAKQGWNVFFWAFDQRVPSGIKEFV
YLVVFVSQLLCGLATVTSASRMIFAFSRDGGLPGSAALAKVSPTYRTPVAAIWTASILSVLFVWGSTLVSVAGTSAYTIV
VSCTVIFLFLSFTVPIVLGMLAWGTPKWDKMGPWNMGRGVFMLFAVLSIVSMILIFVIGIQPPNDWALYITVGFFILTAI
VWFAFERNRFQGPPLGDIIAARQAAIKAAEQAVGETGN
>Mature_517_residues
AAPGYTDVDKAEDVKALHSMGYAQELERRLSRFSNFAVSFSIICILSGGINSLAQATSGAGGIGIGIGWLVGCFVSLTFA
VAMSQISSAYPTAGGLYHWGSILGNRGTGWVTAWLNLLGLITVLGAINVGTWTFFIGAFGPALGIDGSLTNQMIFLVVVT
GLQALINHLGIKLTAKLTDFSGYLIFFGAILIAVVCLIFAEHWDVSRLFTFHNYSGDAGGGVWPSVSNAWVFALGLLLPI
YTITGYDASAHTSEETIKAASSVPRAMVMSVVWSALFGYLFLAAFVLMIPNMDDAAKQGWNVFFWAFDQRVPSGIKEFVY
LVVFVSQLLCGLATVTSASRMIFAFSRDGGLPGSAALAKVSPTYRTPVAAIWTASILSVLFVWGSTLVSVAGTSAYTIVV
SCTVIFLFLSFTVPIVLGMLAWGTPKWDKMGPWNMGRGVFMLFAVLSIVSMILIFVIGIQPPNDWALYITVGFFILTAIV
WFAFERNRFQGPPLGDIIAARQAAIKAAEQAVGETGN

Specific function: Probable Amino-Acid Or Metabolite Transport Protein. [C]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6319991, Length=441, Percent_Identity=28.3446712018141, Blast_Score=112, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6321361, Length=432, Percent_Identity=21.7592592592593, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55459; Mature: 55328

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPGYTDVDKAEDVKALHSMGYAQELERRLSRFSNFAVSFSIICILSGGINSLAQATSG
CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHCCC
AGGIGIGIGWLVGCFVSLTFAVAMSQISSAYPTAGGLYHWGSILGNRGTGWVTAWLNLLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHH
LITVLGAINVGTWTFFIGAFGPALGIDGSLTNQMIFLVVVTGLQALINHLGIKLTAKLTD
HHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
FSGYLIFFGAILIAVVCLIFAEHWDVSRLFTFHNYSGDAGGGVWPSVSNAWVFALGLLLP
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
IYTITGYDASAHTSEETIKAASSVPRAMVMSVVWSALFGYLFLAAFVLMIPNMDDAAKQG
HHHHCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC
WNVFFWAFDQRVPSGIKEFVYLVVFVSQLLCGLATVTSASRMIFAFSRDGGLPGSAALAK
CEEEEEEECHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHEE
VSPTYRTPVAAIWTASILSVLFVWGSTLVSVAGTSAYTIVVSCTVIFLFLSFTVPIVLGM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAWGTPKWDKMGPWNMGRGVFMLFAVLSIVSMILIFVIGIQPPNDWALYITVGFFILTAI
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHH
VWFAFERNRFQGPPLGDIIAARQAAIKAAEQAVGETGN
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AAPGYTDVDKAEDVKALHSMGYAQELERRLSRFSNFAVSFSIICILSGGINSLAQATSG
CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHCCC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HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA