| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472680
Identifier: 13472680
GI number: 13472680
Start: 2456036
End: 2457310
Strand: Direct
Name: 13472680
Synonym: mlr3050
Alternate gene names: NA
Gene position: 2456036-2457310 (Clockwise)
Preceding gene: 13472679
Following gene: 13472681
Centisome position: 34.91
GC content: 63.22
Gene sequence:
>1275_bases ATGCAACAAGGGAGGAAGTACATGTTGCGCAAACTGCTTATCGGAACGGCTCTCGCGACGAGCTTTGCCTTCTCGGCGCA TGCCGCGGACGTCAAGGAAGTGCAGATGCTGCATTGGTGGACGTCGGGCGGTGAAGCGGCCGCCCTCAACGTGCTGAAGG GCGACCTGGCCAAGGAAGGCTTTGCCTGGAAGGACGTGCCGGTGGCCGGCGGCGGCGGCGACGCTGCCATGACCGCGCTG AAGGCGATGGTCGCGGCCGGCAATTACCCGACCGCCTCGCAGATGCTCGGCTACACAGTGCTCGACTATGCGGCGGCCGG CGTCATGGGCGACCTGACCGAGACGGCGAAGAAGGAAGGCTGGGACAAGTCGGTTCCGGCAGCCCTGCAGAAGTTCTCGG TCTATGAAGGCAAGTGGGTCGCGGCTCCGGTCAACGTCCACTCGGTCAACTGGCTGTGGATCAACAAGGCCGTCATGGAC AAGATCGGCGGCACCGAGCCGAAGACCTTCGACGACTTCGTCGCCCTGCTCGACAAGGCCAAGGCCGCGGGCGTGATCCC GCTCGCTCTCGGCGGTCAGAACTGGCAGGAAGCCACCATGTTCGACTCGGTCGTGCTGTCGACCGGCGGGCCTGAGTTCT ACAAGAAGGCCTTCAACGACCTCGACGACGCTTCGCTCAAGTCTGACACGATGAAGAAGTCGTTCGACAACCTCGCCAAG CTCGTCACCTATGTCGACCCGAACTTCTCGGGCCGCGACTGGAACCTTGCCACCGCCATGGTCATCAAGGGCGATGCCCT GGTGCAGGTCATGGGCGACTGGGCCAAGGGTGAGTTCCACGCCGCCAAGAAGACCCCGGGCACCGACTTCCTGTGCTATC GCTTCCCGGGCACCGACGGCTCCGTGATCTACAACTCCGACATGTTCGGCATGTTCAACGTTCCGGACGACCGCAAGGCC GCCCAGGTCGCACTGGCCACCGCCACCTTGTCGAAGAGCTTCCAGTCGGCCTTCAACGTCGTCAAGGGTTCGGTTCCGGC CCGGACCGACGTTCCGGACACCGACTTCGACGCTTGCGGCAAGAAGGGCATCGCCGACCTGAAGAAAGCCAATGAAGGCG GCACGCTGTTCGGCTCGCTGGCCCAGGGCTATGGCGCCCCGCCGGCTGTCGCCAATGCCTACAAGGATGTCGTCTCGAAG TTCGTCCATGGTCAGATCAAGACTTCGGACGAGGCCGTGACCGAACTGGTCAAGGCGATCGACGACGCCAAGTAA
Upstream 100 bases:
>100_bases TATACCGAGGAAAAGACAATCCAGTTTCATCGCGGCCAGCGCACCGGATGGTGGGTCGGCTGAGTTGGGAAGAACCCGGT GGGCTTCCACCGGTCGTTTA
Downstream 100 bases:
>100_bases GCGCAACGTTCGAAATCACCTTCCCCGCTTCGGCGGGGAAGGTTTTATCCCAGGATTGGCCGGCTCGACACCATGCCGAC TGAAGACCCGTATGCACGGG
Product: maltose-binding protein component of ABC sugar transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MQQGRKYMLRKLLIGTALATSFAFSAHAADVKEVQMLHWWTSGGEAAALNVLKGDLAKEGFAWKDVPVAGGGGDAAMTAL KAMVAAGNYPTASQMLGYTVLDYAAAGVMGDLTETAKKEGWDKSVPAALQKFSVYEGKWVAAPVNVHSVNWLWINKAVMD KIGGTEPKTFDDFVALLDKAKAAGVIPLALGGQNWQEATMFDSVVLSTGGPEFYKKAFNDLDDASLKSDTMKKSFDNLAK LVTYVDPNFSGRDWNLATAMVIKGDALVQVMGDWAKGEFHAAKKTPGTDFLCYRFPGTDGSVIYNSDMFGMFNVPDDRKA AQVALATATLSKSFQSAFNVVKGSVPARTDVPDTDFDACGKKGIADLKKANEGGTLFGSLAQGYGAPPAVANAYKDVVSK FVHGQIKTSDEAVTELVKAIDDAK
Sequences:
>Translated_424_residues MQQGRKYMLRKLLIGTALATSFAFSAHAADVKEVQMLHWWTSGGEAAALNVLKGDLAKEGFAWKDVPVAGGGGDAAMTAL KAMVAAGNYPTASQMLGYTVLDYAAAGVMGDLTETAKKEGWDKSVPAALQKFSVYEGKWVAAPVNVHSVNWLWINKAVMD KIGGTEPKTFDDFVALLDKAKAAGVIPLALGGQNWQEATMFDSVVLSTGGPEFYKKAFNDLDDASLKSDTMKKSFDNLAK LVTYVDPNFSGRDWNLATAMVIKGDALVQVMGDWAKGEFHAAKKTPGTDFLCYRFPGTDGSVIYNSDMFGMFNVPDDRKA AQVALATATLSKSFQSAFNVVKGSVPARTDVPDTDFDACGKKGIADLKKANEGGTLFGSLAQGYGAPPAVANAYKDVVSK FVHGQIKTSDEAVTELVKAIDDAK >Mature_424_residues MQQGRKYMLRKLLIGTALATSFAFSAHAADVKEVQMLHWWTSGGEAAALNVLKGDLAKEGFAWKDVPVAGGGGDAAMTAL KAMVAAGNYPTASQMLGYTVLDYAAAGVMGDLTETAKKEGWDKSVPAALQKFSVYEGKWVAAPVNVHSVNWLWINKAVMD KIGGTEPKTFDDFVALLDKAKAAGVIPLALGGQNWQEATMFDSVVLSTGGPEFYKKAFNDLDDASLKSDTMKKSFDNLAK LVTYVDPNFSGRDWNLATAMVIKGDALVQVMGDWAKGEFHAAKKTPGTDFLCYRFPGTDGSVIYNSDMFGMFNVPDDRKA AQVALATATLSKSFQSAFNVVKGSVPARTDVPDTDFDACGKKGIADLKKANEGGTLFGSLAQGYGAPPAVANAYKDVVSK FVHGQIKTSDEAVTELVKAIDDAK
Specific function: Part of a binding-protein-dependent transport system for a sugar (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 45212; Mature: 45212
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQGRKYMLRKLLIGTALATSFAFSAHAADVKEVQMLHWWTSGGEAAALNVLKGDLAKEG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCCEEHHHHHHHHHHCC FAWKDVPVAGGGGDAAMTALKAMVAAGNYPTASQMLGYTVLDYAAAGVMGDLTETAKKEG CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC WDKSVPAALQKFSVYEGKWVAAPVNVHSVNWLWINKAVMDKIGGTEPKTFDDFVALLDKA CCCHHHHHHHHHHCCCCCEEEECCEEEEEEEEEECHHHHHHCCCCCCCCHHHHHHHHHHH KAAGVIPLALGGQNWQEATMFDSVVLSTGGPEFYKKAFNDLDDASLKSDTMKKSFDNLAK HHCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LVTYVDPNFSGRDWNLATAMVIKGDALVQVMGDWAKGEFHAAKKTPGTDFLCYRFPGTDG HHHHCCCCCCCCCCCEEEEEEECCCHHHHHHCCCCCCCEEECCCCCCCCEEEEECCCCCC SVIYNSDMFGMFNVPDDRKAAQVALATATLSKSFQSAFNVVKGSVPARTDVPDTDFDACG CEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHC KKGIADLKKANEGGTLFGSLAQGYGAPPAVANAYKDVVSKFVHGQIKTSDEAVTELVKAI CCCHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH DDAK CCCC >Mature Secondary Structure MQQGRKYMLRKLLIGTALATSFAFSAHAADVKEVQMLHWWTSGGEAAALNVLKGDLAKEG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCCEEHHHHHHHHHHCC FAWKDVPVAGGGGDAAMTALKAMVAAGNYPTASQMLGYTVLDYAAAGVMGDLTETAKKEG CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC WDKSVPAALQKFSVYEGKWVAAPVNVHSVNWLWINKAVMDKIGGTEPKTFDDFVALLDKA CCCHHHHHHHHHHCCCCCEEEECCEEEEEEEEEECHHHHHHCCCCCCCCHHHHHHHHHHH KAAGVIPLALGGQNWQEATMFDSVVLSTGGPEFYKKAFNDLDDASLKSDTMKKSFDNLAK HHCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LVTYVDPNFSGRDWNLATAMVIKGDALVQVMGDWAKGEFHAAKKTPGTDFLCYRFPGTDG HHHHCCCCCCCCCCCEEEEEEECCCHHHHHHCCCCCCCEEECCCCCCCCEEEEECCCCCC SVIYNSDMFGMFNVPDDRKAAQVALATATLSKSFQSAFNVVKGSVPARTDVPDTDFDACG CEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHC KKGIADLKKANEGGTLFGSLAQGYGAPPAVANAYKDVVSKFVHGQIKTSDEAVTELVKAI CCCHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH DDAK CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]