| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yhiX [C]
Identifier: 13472669
GI number: 13472669
Start: 2443964
End: 2444809
Strand: Direct
Name: yhiX [C]
Synonym: mlr3037
Alternate gene names: 13472669
Gene position: 2443964-2444809 (Clockwise)
Preceding gene: 13472668
Following gene: 13472672
Centisome position: 34.73
GC content: 65.37
Gene sequence:
>846_bases ATGAGCGCAACGGCCATGTCGCAATTCAAGGTTCAGCTCCTTATGGACACCGGCACTGTCAGGGTGCGGGATGTCGTCTG CAGCGGCGAATGCCGTCATAGGAGCGATGAGGAGTGCACTGGGGCGACGCATCTGGTGTTTGCCTATCGTGGCGTCTTCG TGCGCCATGTCGGCCGCAATGATGCGGTCGCGGAAGCCAACCAGTTGCTGTTCTTCAATGAGGCCGAGGCCTACCAGATC AGCCACCCTGTCGAGGGTGGCGACGCCTGCCTCGACCTTGTCATCGAGGAAGGCCAATTGCGGGAACTGGCGCCGAAGGA CCAGTTGCGCGCCGGTGGTGCCCTGGCGTTTCGCCGCCAGCGCCGGCGCATCGATCCGCGCGCGCAGGCGCTGGTGGCGC TGCTGCGCCACAGCCTGAGCCGCAATGTCGCCGAAACGCTGGAGGCCGAGACTTTGGCGCTGACGCTGGTGCGGCGCTCG CTCGGCGAGCGCACTTCGCACGTCGCAGGCGCCAGCCCCGGACGGCAAAAGCTGGTCGACCGCGCCAAGCTGGTGCTGGC GTCGGATCTGTCGCGGCGCTGGACGCTGGCCGAGATTGCCGCCGAGGTCGGCGTCTCGCCGGTCTATCTGACGCAAATAT TCCAGCAGGTCGAGGCGATGCCGCTCTATCGCTATCATCTGCGGCTGCGGCTGGCGCGCGCGCTCGACCTGCTTGGCCGC TACGACAATCTGACCGCTTTGGGCATGGACCTCGGATTTTCCAGCCACAGCCATTTCAGCGCGTCGTTCAGACAGGTCTA CGGACGCACGCCGGCGGAATTCCAGCGCTCGATCAGATCGCGCTGA
Upstream 100 bases:
>100_bases GGATTGAGCAGCCCCAGGGAGAAAGTCTCCTGACAGGATTGGGCAGGCCGCTTGAGTAAAGTGCCCATCGCAATGCCGGA ATCAGTTTCCGGCATCAGGG
Downstream 100 bases:
>100_bases AGCAACTGCTTCAAAGAAAGCGCGAGATATCAGCCGCGCAGGGCAGCCATGGCGGCCGCGTGAAGTTCCGGCGTCGCCGC CGCCAGCACATCGCCGCCCT
Product: transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MSATAMSQFKVQLLMDTGTVRVRDVVCSGECRHRSDEECTGATHLVFAYRGVFVRHVGRNDAVAEANQLLFFNEAEAYQI SHPVEGGDACLDLVIEEGQLRELAPKDQLRAGGALAFRRQRRRIDPRAQALVALLRHSLSRNVAETLEAETLALTLVRRS LGERTSHVAGASPGRQKLVDRAKLVLASDLSRRWTLAEIAAEVGVSPVYLTQIFQQVEAMPLYRYHLRLRLARALDLLGR YDNLTALGMDLGFSSHSHFSASFRQVYGRTPAEFQRSIRSR
Sequences:
>Translated_281_residues MSATAMSQFKVQLLMDTGTVRVRDVVCSGECRHRSDEECTGATHLVFAYRGVFVRHVGRNDAVAEANQLLFFNEAEAYQI SHPVEGGDACLDLVIEEGQLRELAPKDQLRAGGALAFRRQRRRIDPRAQALVALLRHSLSRNVAETLEAETLALTLVRRS LGERTSHVAGASPGRQKLVDRAKLVLASDLSRRWTLAEIAAEVGVSPVYLTQIFQQVEAMPLYRYHLRLRLARALDLLGR YDNLTALGMDLGFSSHSHFSASFRQVYGRTPAEFQRSIRSR >Mature_280_residues SATAMSQFKVQLLMDTGTVRVRDVVCSGECRHRSDEECTGATHLVFAYRGVFVRHVGRNDAVAEANQLLFFNEAEAYQIS HPVEGGDACLDLVIEEGQLRELAPKDQLRAGGALAFRRQRRRIDPRAQALVALLRHSLSRNVAETLEAETLALTLVRRSL GERTSHVAGASPGRQKLVDRAKLVLASDLSRRWTLAEIAAEVGVSPVYLTQIFQQVEAMPLYRYHLRLRLARALDLLGRY DNLTALGMDLGFSSHSHFSASFRQVYGRTPAEFQRSIRSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31417; Mature: 31286
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATAMSQFKVQLLMDTGTVRVRDVVCSGECRHRSDEECTGATHLVFAYRGVFVRHVGRN CCCCHHHHHHEEEEEECCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC DAVAEANQLLFFNEAEAYQISHPVEGGDACLDLVIEEGQLRELAPKDQLRAGGALAFRRQ CHHHHHCCEEEEECCCCEEECCCCCCHHHHHHHHHCCCCHHHCCCHHHHHCCCHHHHHHH RRRIDPRAQALVALLRHSLSRNVAETLEAETLALTLVRRSLGERTSHVAGASPGRQKLVD HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH RAKLVLASDLSRRWTLAEIAAEVGVSPVYLTQIFQQVEAMPLYRYHLRLRLARALDLLGR HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHC YDNLTALGMDLGFSSHSHFSASFRQVYGRTPAEFQRSIRSR CCCCEEEEHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure SATAMSQFKVQLLMDTGTVRVRDVVCSGECRHRSDEECTGATHLVFAYRGVFVRHVGRN CCCHHHHHHEEEEEECCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC DAVAEANQLLFFNEAEAYQISHPVEGGDACLDLVIEEGQLRELAPKDQLRAGGALAFRRQ CHHHHHCCEEEEECCCCEEECCCCCCHHHHHHHHHCCCCHHHCCCHHHHHCCCHHHHHHH RRRIDPRAQALVALLRHSLSRNVAETLEAETLALTLVRRSLGERTSHVAGASPGRQKLVD HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH RAKLVLASDLSRRWTLAEIAAEVGVSPVYLTQIFQQVEAMPLYRYHLRLRLARALDLLGR HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHC YDNLTALGMDLGFSSHSHFSASFRQVYGRTPAEFQRSIRSR CCCCEEEEHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA