| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472660
Identifier: 13472660
GI number: 13472660
Start: 2432219
End: 2433340
Strand: Direct
Name: 13472660
Synonym: mlr3028
Alternate gene names: NA
Gene position: 2432219-2433340 (Clockwise)
Preceding gene: 13472659
Following gene: 13472664
Centisome position: 34.57
GC content: 66.4
Gene sequence:
>1122_bases ATGGCGCAGGAGCAGCCGCAGCAAAATCGTGGATGGTCGTTGCGCGACCTTCTGTTTCCGCGCCGCAGCGAGCGGGTCGA ACCGCCGCTCGACATCCAGAAGGCAAAACCAAAGCCGCGTAAACCAAGGATACCGCGCGCGCCGGTCGAGCCACAAACAC CGATAGCGGAAAAGGCGCCAGACGCTCGCATCGTCCTGGTCGTCGGCGACTTCATGGCGTCGGGCCTCGCCGAAGGCCTG GACATAGCCTTTGCCGACAACCCGGCTGTCAGGATCGTCGCGCGCAGCAATGGCTCGTCGGGCTTCGTGCGCGATGATTT CTACAACTGGCCCGAACAGATCAAATCGCTGATTGAGACCGAGAAACCGGCTGCCGTCGTTGTCATGCTGGGCTCCAACG ACCGCCAGCAGATGAAAGTGGGGGATGTGCGCGAGCAGCCCCGGTCCGAGAACTGGACCAAGGAATATGAGCGCCGCACC GACGAACTCGGCAAGGCCATCGCCACCGCCAAGGTGCCTTTCCTGTGGGTCGGCATGCCAGCGTTCCGGGTGCCGAAGAT GACCTCGGACATGCTGGCCTTCAACGACATCTACCACAAGGCCGCCGAAAGCCATGGCGGCGAATTCGTCGACGTCTGGG ATGGGTTCGTCGACGAGAACGGCGCCTTCGTCACCAACGGCCCCGACATGAACGGCCAGCCGGTGCGGCTGCGCGCCGAT GACGGCATCAACGTCTCCAAGGCCGGCAAGCGCAAGCTCGCCTTCTACACCGAAAAGCCGCTGATGAAGATCCTGGGCCT GGCCGGGCCGGGCAGCGTGGCCCCGGCGACGGCACCCGCGGGCGCGCCCGTCGAGGCACCGGCGCCGGCCGCGGCACCTA TCGTGATCGACCGTACCGCACCCATGCTGCTCAGCGACCCGGCGCTCGACGGTGGCACCGAACTGCTCGGCGCCGCGCCC CCGGCAAAAGCCAATCCGGCGCTTCCCGGTGAAAAGCTGGTGATCGAAGGCAAGGCGCCGGAGGCCTCGCCCGGACGCGC CGACGATTTCTCCTGGCCGCCGAAGGCGGAGCCGCCGGCGACAGCCGCGGCGACCGACACGACGACGGCGATCACCCCTT AA
Upstream 100 bases:
>100_bases GGCCGCGCGTATCGCGATCCTTGCTCGTCGCACGCCGATCCTTTTTCTGGCGATCGTCCTGTTGGCGATCGGCGCCGCCG GTGCCTTCCATGTGCCGGCC
Downstream 100 bases:
>100_bases TCACGCAGAACTCTTGAGACTGTTTCGAAACTCGCTCCTGTGTTGGCCGCGGGACTAGAGTTTCCAAACGGTCTCAGCGC GGCAACACACTCGTCCCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MAQEQPQQNRGWSLRDLLFPRRSERVEPPLDIQKAKPKPRKPRIPRAPVEPQTPIAEKAPDARIVLVVGDFMASGLAEGL DIAFADNPAVRIVARSNGSSGFVRDDFYNWPEQIKSLIETEKPAAVVVMLGSNDRQQMKVGDVREQPRSENWTKEYERRT DELGKAIATAKVPFLWVGMPAFRVPKMTSDMLAFNDIYHKAAESHGGEFVDVWDGFVDENGAFVTNGPDMNGQPVRLRAD DGINVSKAGKRKLAFYTEKPLMKILGLAGPGSVAPATAPAGAPVEAPAPAAAPIVIDRTAPMLLSDPALDGGTELLGAAP PAKANPALPGEKLVIEGKAPEASPGRADDFSWPPKAEPPATAAATDTTTAITP
Sequences:
>Translated_373_residues MAQEQPQQNRGWSLRDLLFPRRSERVEPPLDIQKAKPKPRKPRIPRAPVEPQTPIAEKAPDARIVLVVGDFMASGLAEGL DIAFADNPAVRIVARSNGSSGFVRDDFYNWPEQIKSLIETEKPAAVVVMLGSNDRQQMKVGDVREQPRSENWTKEYERRT DELGKAIATAKVPFLWVGMPAFRVPKMTSDMLAFNDIYHKAAESHGGEFVDVWDGFVDENGAFVTNGPDMNGQPVRLRAD DGINVSKAGKRKLAFYTEKPLMKILGLAGPGSVAPATAPAGAPVEAPAPAAAPIVIDRTAPMLLSDPALDGGTELLGAAP PAKANPALPGEKLVIEGKAPEASPGRADDFSWPPKAEPPATAAATDTTTAITP >Mature_372_residues AQEQPQQNRGWSLRDLLFPRRSERVEPPLDIQKAKPKPRKPRIPRAPVEPQTPIAEKAPDARIVLVVGDFMASGLAEGLD IAFADNPAVRIVARSNGSSGFVRDDFYNWPEQIKSLIETEKPAAVVVMLGSNDRQQMKVGDVREQPRSENWTKEYERRTD ELGKAIATAKVPFLWVGMPAFRVPKMTSDMLAFNDIYHKAAESHGGEFVDVWDGFVDENGAFVTNGPDMNGQPVRLRADD GINVSKAGKRKLAFYTEKPLMKILGLAGPGSVAPATAPAGAPVEAPAPAAAPIVIDRTAPMLLSDPALDGGTELLGAAPP AKANPALPGEKLVIEGKAPEASPGRADDFSWPPKAEPPATAAATDTTTAITP
Specific function: Unknown
COG id: COG2845
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40043; Mature: 39912
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQEQPQQNRGWSLRDLLFPRRSERVEPPLDIQKAKPKPRKPRIPRAPVEPQTPIAEKAP CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHCCC DARIVLVVGDFMASGLAEGLDIAFADNPAVRIVARSNGSSGFVRDDFYNWPEQIKSLIET CCEEEEEECCHHHHHHHHCCEEEEECCCEEEEEEECCCCCCCCCCHHCCCHHHHHHHHHC EKPAAVVVMLGSNDRQQMKVGDVREQPRSENWTKEYERRTDELGKAIATAKVPFLWVGMP CCCEEEEEEECCCCHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCC AFRVPKMTSDMLAFNDIYHKAAESHGGEFVDVWDGFVDENGAFVTNGPDMNGQPVRLRAD HHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCEECCCCEEEECCCCCCCCEEEEECC DGINVSKAGKRKLAFYTEKPLMKILGLAGPGSVAPATAPAGAPVEAPAPAAAPIVIDRTA CCCCCCCCCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC PMLLSDPALDGGTELLGAAPPAKANPALPGEKLVIEGKAPEASPGRADDFSWPPKAEPPA CCEEECCCCCCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC TAAATDTTTAITP CCCCCCCCCCCCC >Mature Secondary Structure AQEQPQQNRGWSLRDLLFPRRSERVEPPLDIQKAKPKPRKPRIPRAPVEPQTPIAEKAP CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHCCC DARIVLVVGDFMASGLAEGLDIAFADNPAVRIVARSNGSSGFVRDDFYNWPEQIKSLIET CCEEEEEECCHHHHHHHHCCEEEEECCCEEEEEEECCCCCCCCCCHHCCCHHHHHHHHHC EKPAAVVVMLGSNDRQQMKVGDVREQPRSENWTKEYERRTDELGKAIATAKVPFLWVGMP CCCEEEEEEECCCCHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCC AFRVPKMTSDMLAFNDIYHKAAESHGGEFVDVWDGFVDENGAFVTNGPDMNGQPVRLRAD HHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCEECCCCEEEECCCCCCCCEEEEECC DGINVSKAGKRKLAFYTEKPLMKILGLAGPGSVAPATAPAGAPVEAPAPAAAPIVIDRTA CCCCCCCCCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC PMLLSDPALDGGTELLGAAPPAKANPALPGEKLVIEGKAPEASPGRADDFSWPPKAEPPA CCEEECCCCCCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC TAAATDTTTAITP CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA