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The map label for this gene is yrbH [C]

Identifier: 13472656

GI number: 13472656

Start: 2426593

End: 2427594

Strand: Reverse

Name: yrbH [C]

Synonym: mll3023

Alternate gene names: 13472656

Gene position: 2427594-2426593 (Counterclockwise)

Preceding gene: 13472658

Following gene: 13472647

Centisome position: 34.5

GC content: 64.97

Gene sequence:

>1002_bases
ATGCATGCGAGATCCCTCGATAAGAAGCCCCTGGACAGGCAAGCGTCGATTGATTCGGCACTGAGAACGGTGGCTACCGA
GCAGGCCGGAATCGCCGCCCTTGCCGAGGCGCTCGAGAACGGACTGGCCGCGCCTTTCGCGCAGGCCGTCGACATGATCT
CGAAGATCGAAGGCCGGCTGATCGTCACCGGCGTCGGCAAAAGCGGCCATATCGGCTCGAAGATCGCGGCGACGCTGGCT
TCGACCGGCACGCCGGCCTTCTTCGTCCATCCCGTCGAAGCCAACCATGGCGATCTCGGCATGATCGCCAAGGATGATGC
CATCATCGCCATCTCTTGGTCGGGCGAGAGCAAGGAGATGCTCGGCATCGTCGCCTATTCCAGGCGCTTCTCCATCCCGC
TCATCGCCGTCACATCAGGTGAGACATCGGCGCTGGCGCGCGCGGCCGACGTGGTGCTGCTTTTGCCGCGCACCCCGGAG
GCCTGTCCGCATGGCCTGGCGCCGACGACGTCGACGCTGCTGCAACTGGTCATCGGCGACGCACTGGCGATCGCGCTGCT
CGAGGCACGCGGCTTCACGCCGGACCATTTCCGCACCTTCCATCCCGGCGGCCAGCTCGGCGCCAATTTGACCATGGTCT
CCGAGATCATGCGGGTCGGCGACCAGATGCCGCTGGCCGTGCTCGGCACCAAGATGCCGGAAGCGGTGATGACGCTGTCG
CAGAAGAAGGTCGGCTGCGTGCTGATCGTCGACGCCAATGGCGAACTGGCCGGGATCATCACCGACGGCGATGTCGCGCG
CAACCTGCATCGCAATTTGGCCGACGTCATCGTCGACGAGGTGATGACCCGCACGCCCAAGACGGTCGACCCGCAGACGC
TTGCCGGCACGGCGATCGCGCTGCTCAACGAGCACAATATCGGCGCGCTGGTGGTGACCAGGAACAACATGCCGCTCGGC
GTGGTGCATTTCCACGACCTGTTGCGCATCGGCGCTGCCTAA

Upstream 100 bases:

>100_bases
CGTTTACTGGCGCATATGACCTGTCCGAGGCCTCCGCCGTCTGGGCGTCGGCGCCATTTCTGTTGGACAGGCGGGCGGCA
ACGCGCTAATCGCATCATCC

Downstream 100 bases:

>100_bases
GATGTGTTGATATCAGGTGAGGCCGGTCTGCAAATGGCTGACGCCTGCGCTTCCGGCCTTCGCCGGCCGAAGCACTCTTG
AGGGATCGTGGCAGCTGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MHARSLDKKPLDRQASIDSALRTVATEQAGIAALAEALENGLAAPFAQAVDMISKIEGRLIVTGVGKSGHIGSKIAATLA
STGTPAFFVHPVEANHGDLGMIAKDDAIIAISWSGESKEMLGIVAYSRRFSIPLIAVTSGETSALARAADVVLLLPRTPE
ACPHGLAPTTSTLLQLVIGDALAIALLEARGFTPDHFRTFHPGGQLGANLTMVSEIMRVGDQMPLAVLGTKMPEAVMTLS
QKKVGCVLIVDANGELAGIITDGDVARNLHRNLADVIVDEVMTRTPKTVDPQTLAGTAIALLNEHNIGALVVTRNNMPLG
VVHFHDLLRIGAA

Sequences:

>Translated_333_residues
MHARSLDKKPLDRQASIDSALRTVATEQAGIAALAEALENGLAAPFAQAVDMISKIEGRLIVTGVGKSGHIGSKIAATLA
STGTPAFFVHPVEANHGDLGMIAKDDAIIAISWSGESKEMLGIVAYSRRFSIPLIAVTSGETSALARAADVVLLLPRTPE
ACPHGLAPTTSTLLQLVIGDALAIALLEARGFTPDHFRTFHPGGQLGANLTMVSEIMRVGDQMPLAVLGTKMPEAVMTLS
QKKVGCVLIVDANGELAGIITDGDVARNLHRNLADVIVDEVMTRTPKTVDPQTLAGTAIALLNEHNIGALVVTRNNMPLG
VVHFHDLLRIGAA
>Mature_333_residues
MHARSLDKKPLDRQASIDSALRTVATEQAGIAALAEALENGLAAPFAQAVDMISKIEGRLIVTGVGKSGHIGSKIAATLA
STGTPAFFVHPVEANHGDLGMIAKDDAIIAISWSGESKEMLGIVAYSRRFSIPLIAVTSGETSALARAADVVLLLPRTPE
ACPHGLAPTTSTLLQLVIGDALAIALLEARGFTPDHFRTFHPGGQLGANLTMVSEIMRVGDQMPLAVLGTKMPEAVMTLS
QKKVGCVLIVDANGELAGIITDGDVARNLHRNLADVIVDEVMTRTPKTVDPQTLAGTAIALLNEHNIGALVVTRNNMPLG
VVHFHDLLRIGAA

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=314, Percent_Identity=43.9490445859873, Blast_Score=243, Evalue=1e-65,
Organism=Escherichia coli, GI87082151, Length=300, Percent_Identity=43.6666666666667, Blast_Score=211, Evalue=5e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 34864; Mature: 34864

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHARSLDKKPLDRQASIDSALRTVATEQAGIAALAEALENGLAAPFAQAVDMISKIEGRL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEE
IVTGVGKSGHIGSKIAATLASTGTPAFFVHPVEANHGDLGMIAKDDAIIAISWSGESKEM
EEEECCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCEEEEECCCEEEEEEECCCCCCE
LGIVAYSRRFSIPLIAVTSGETSALARAADVVLLLPRTPEACPHGLAPTTSTLLQLVIGD
EEEEEECCCCCCEEEEEECCCHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
ALAIALLEARGFTPDHFRTFHPGGQLGANLTMVSEIMRVGDQMPLAVLGTKMPEAVMTLS
HHHHHHHHHCCCCCHHCEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHH
QKKVGCVLIVDANGELAGIITDGDVARNLHRNLADVIVDEVMTRTPKTVDPQTLAGTAIA
CCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEE
LLNEHNIGALVVTRNNMPLGVVHFHDLLRIGAA
EEECCCCEEEEEECCCCCEEHHHHHHHHHHCCC
>Mature Secondary Structure
MHARSLDKKPLDRQASIDSALRTVATEQAGIAALAEALENGLAAPFAQAVDMISKIEGRL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEE
IVTGVGKSGHIGSKIAATLASTGTPAFFVHPVEANHGDLGMIAKDDAIIAISWSGESKEM
EEEECCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCEEEEECCCEEEEEEECCCCCCE
LGIVAYSRRFSIPLIAVTSGETSALARAADVVLLLPRTPEACPHGLAPTTSTLLQLVIGD
EEEEEECCCCCCEEEEEECCCHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
ALAIALLEARGFTPDHFRTFHPGGQLGANLTMVSEIMRVGDQMPLAVLGTKMPEAVMTLS
HHHHHHHHHCCCCCHHCEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHH
QKKVGCVLIVDANGELAGIITDGDVARNLHRNLADVIVDEVMTRTPKTVDPQTLAGTAIA
CCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEE
LLNEHNIGALVVTRNNMPLGVVHFHDLLRIGAA
EEECCCCEEEEEECCCCCEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]