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The map label for this gene is ybbJ [H]

Identifier: 13472655

GI number: 13472655

Start: 2425876

End: 2426340

Strand: Direct

Name: ybbJ [H]

Synonym: mlr3022

Alternate gene names: 13472655

Gene position: 2425876-2426340 (Clockwise)

Preceding gene: 13472654

Following gene: 13472657

Centisome position: 34.48

GC content: 65.81

Gene sequence:

>465_bases
ATGTTCGATCGCATCATTTCCGAACTCGGACCCTGGAACTGGATGGTTCTGGGCTTCGTGCTGCTGGTCATGGAAATCAT
CGCGCCTGGCATCTTCATGCTGTGGATCGGCATCGCCGCGCTCATCATCGGCGCGGTGTCGCTGCTGATCTGGGATGCGG
CGATCTGGACCTGGCAGGTCCAGGTCCTTGCCTTCCTGGCGCTGTCGCTGGTTTCAGCCTACGTCGGCAAGAAACTCATG
GGCGGACGCGACCAGCCGACCGACCAGCCGCTGCTCAACCGGCGCGGCGCCCAGATGGTCGGCCGCATGGCGACGCTTGC
CGAGCCGATCAAGGACGGCCGCGGCCGCATCAAGCTCGGCGACACGCTGTGGCGCGTCTCCGGCCCCGACCTGCCCGCCG
GCACGCAGGTGCGTGTGACAAGTGCCGCGGATACGGACCTGGAACTGACGGTGGAGCGCGTCTGA

Upstream 100 bases:

>100_bases
GCCAAGGAAGTCTTCCGCAGCGAGGGCACGACCGGTGCGCAGCGCCAGGCCGCCCGCCCGCCGGTCGTGCGGCCGAGCGA
AAACTAAGGAGGTCACTCCC

Downstream 100 bases:

>100_bases
ATTTTCAGCCGGGCGCCGCGCAAGATGTGTCGAGATTCAGGTCAGGCCGAGTCGGAGTCGAAGACGGGCGCGAAGCGAAC
AAACAAGGCGGGTTACGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MFDRIISELGPWNWMVLGFVLLVMEIIAPGIFMLWIGIAALIIGAVSLLIWDAAIWTWQVQVLAFLALSLVSAYVGKKLM
GGRDQPTDQPLLNRRGAQMVGRMATLAEPIKDGRGRIKLGDTLWRVSGPDLPAGTQVRVTSAADTDLELTVERV

Sequences:

>Translated_154_residues
MFDRIISELGPWNWMVLGFVLLVMEIIAPGIFMLWIGIAALIIGAVSLLIWDAAIWTWQVQVLAFLALSLVSAYVGKKLM
GGRDQPTDQPLLNRRGAQMVGRMATLAEPIKDGRGRIKLGDTLWRVSGPDLPAGTQVRVTSAADTDLELTVERV
>Mature_154_residues
MFDRIISELGPWNWMVLGFVLLVMEIIAPGIFMLWIGIAALIIGAVSLLIWDAAIWTWQVQVLAFLALSLVSAYVGKKLM
GGRDQPTDQPLLNRRGAQMVGRMATLAEPIKDGRGRIKLGDTLWRVSGPDLPAGTQVRVTSAADTDLELTVERV

Specific function: Unknown

COG id: COG1585

COG function: function code OU; Membrane protein implicated in regulation of membrane protease activity

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0826 [H]

Homologues:

Organism=Escherichia coli, GI145693099, Length=128, Percent_Identity=34.375, Blast_Score=71, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR002810 [H]

Pfam domain/function: PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 16913; Mature: 16913

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDRIISELGPWNWMVLGFVLLVMEIIAPGIFMLWIGIAALIIGAVSLLIWDAAIWTWQV
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVLAFLALSLVSAYVGKKLMGGRDQPTDQPLLNRRGAQMVGRMATLAEPIKDGRGRIKLG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
DTLWRVSGPDLPAGTQVRVTSAADTDLELTVERV
CEEEECCCCCCCCCCEEEEECCCCCCCEEEEECC
>Mature Secondary Structure
MFDRIISELGPWNWMVLGFVLLVMEIIAPGIFMLWIGIAALIIGAVSLLIWDAAIWTWQV
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVLAFLALSLVSAYVGKKLMGGRDQPTDQPLLNRRGAQMVGRMATLAEPIKDGRGRIKLG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
DTLWRVSGPDLPAGTQVRVTSAADTDLELTVERV
CEEEECCCCCCCCCCEEEEECCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]