Click here to switch to the map view.

The map label for this gene is flbT

Identifier: 13472596

GI number: 13472596

Start: 2366375

End: 2366818

Strand: Direct

Name: flbT

Synonym: mlr2941

Alternate gene names: 13472596

Gene position: 2366375-2366818 (Clockwise)

Preceding gene: 13472595

Following gene: 13472597

Centisome position: 33.63

GC content: 60.14

Gene sequence:

>444_bases
ATGACCAACACGCTGAAGATATCGCTTAAGCCCAACGAGAAGATCTACATCAACGGCGCCGTCATCCGCGTCGACCGCAA
GGTCACCATTGAACTGATGAACGACGTGCAGTTCCTGCTCGAAAGCCACGTCATCCAGGCCGACCAGGCGTCGACGCCGC
TCAGGCAACTCTATTTCATCGTGCAGGTCATGCTGATCAATCCGGCCGGCGCTGATGACGCCCGCGAGATGTTCCGCCGC
TCGCTGCCCTTGCTCATCGCAAGTTTCGAGGACGCCGAGATCTGCAGCGCCCTGAAGCAGATCGACCGTATGGTCGGCGA
AGATCATATTTACGAGGCATTGAAGGCGATCCGTTCGCTCTATCCTCTCGAACGCCGCGCGCTTGGCGGCAATGACGATG
TTCCGGGCGCCCCGCGCCCGCTGGCCGTGGGAGCACGCTACTGA

Upstream 100 bases:

>100_bases
GCCTTTGGCTGCTGCGCGAGGCGGAGGACATCCGCCAGGGCCGCACCAACAATTTCGAAGGGCTGATCGAAGTGTCCCAG
ATCATCCGCGACGGCATTCA

Downstream 100 bases:

>100_bases
TGACCGTGGACATGACGACGACGATACCGGTCGGTGCCAATTCGACCACCAAGTCGACCTCGAAGACAGCGGTCGACTAC
CAGTCTTTCCTGAAGCTTCT

Product: flagellar biosynthesis repressor FlbT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MTNTLKISLKPNEKIYINGAVIRVDRKVTIELMNDVQFLLESHVIQADQASTPLRQLYFIVQVMLINPAGADDAREMFRR
SLPLLIASFEDAEICSALKQIDRMVGEDHIYEALKAIRSLYPLERRALGGNDDVPGAPRPLAVGARY

Sequences:

>Translated_147_residues
MTNTLKISLKPNEKIYINGAVIRVDRKVTIELMNDVQFLLESHVIQADQASTPLRQLYFIVQVMLINPAGADDAREMFRR
SLPLLIASFEDAEICSALKQIDRMVGEDHIYEALKAIRSLYPLERRALGGNDDVPGAPRPLAVGARY
>Mature_146_residues
TNTLKISLKPNEKIYINGAVIRVDRKVTIELMNDVQFLLESHVIQADQASTPLRQLYFIVQVMLINPAGADDAREMFRRS
LPLLIASFEDAEICSALKQIDRMVGEDHIYEALKAIRSLYPLERRALGGNDDVPGAPRPLAVGARY

Specific function: Has a post-transcriptional repressor function in flagellum biogenesis. Associates with the 5'-UTR of fljK mRNA and promotes its degradation

COG id: COG5443

COG function: function code N; Flagellar biosynthesis regulator FlbT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flbT family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FLBT_RHILO (Q98HB7)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_104163.1
- GeneID:   1226824
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:mlr2941
- NMPDR:   fig|266835.1.peg.2267
- HOGENOM:   HBG660673
- OMA:   MILINPE
- ProtClustDB:   PRK00794
- HAMAP:   MF_00783
- InterPro:   IPR009967
- InterPro:   IPR016006
- PIRSF:   PIRSF009533

Pfam domain/function: PF07378 FlbT

EC number: NA

Molecular weight: Translated: 16508; Mature: 16377

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNTLKISLKPNEKIYINGAVIRVDRKVTIELMNDVQFLLESHVIQADQASTPLRQLYFI
CCCEEEEEECCCCEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
VQVMLINPAGADDAREMFRRSLPLLIASFEDAEICSALKQIDRMVGEDHIYEALKAIRSL
HHHHHCCCCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
YPLERRALGGNDDVPGAPRPLAVGARY
CCHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TNTLKISLKPNEKIYINGAVIRVDRKVTIELMNDVQFLLESHVIQADQASTPLRQLYFI
CCEEEEEECCCCEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
VQVMLINPAGADDAREMFRRSLPLLIASFEDAEICSALKQIDRMVGEDHIYEALKAIRSL
HHHHHCCCCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
YPLERRALGGNDDVPGAPRPLAVGARY
CCHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968