| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is flgE [H]
Identifier: 13472592
GI number: 13472592
Start: 2362216
End: 2363472
Strand: Direct
Name: flgE [H]
Synonym: mlr2937
Alternate gene names: 13472592
Gene position: 2362216-2363472 (Clockwise)
Preceding gene: 13472591
Following gene: 13472593
Centisome position: 33.57
GC content: 63.4
Gene sequence:
>1257_bases ATGAGCCTCTACGGAATGATGCGGACCGGCGTTTCCGGCATGAACGCCCAGGCCAACCGCCTGTCGACAACCGCCGACAA CATCGCGAACTCCGACACCACCGGCTACAAGCGGTCCTCGGCCGAGTTCTCGACCCTGATCATGCCATCGACGGGCGGCG CCTATAATTCCGGCGGCGTCACCACCACGATCCGGCAGGCTGTCAGCGATCCGGGCGTGCTTCAGTACACGACCTCGGTC TCCGACCTTGCCGTCAGCGGCGATGGTTTCTTCGTCGTCCAGGATCCGAGCGGCACACCTTTCCTGACCCGCGCCGGCGC CTTCGTTCCCGATGCACAGGGCAGGCTGGTCAACGCGGCTGGCTTCCAGCTGATGGCCTACAGCTACGCCAATGGCACGC CGGCGGCGACGGTGAACGGCTTCGAAGGTCTGCAGCCGGTCGTCATCTCCGACCAGGGCCTGACCGCGACGCCGAGCACC CTGGGTACTTACAGCGGCAATCTGCCGGCAGGGGCGACGCCGGTCGCCGCCGCCAACCTGCCCGGCGCCAACGCCTCCAC CGCGCAATACACCTCGAAATCGTCGATGGTCGCCTATGACAACCTCGGCAACAAGAAACTGCTCGACGTCTATTTCACCA ACACCGGTACCGGCACCTGGCAGGTCGCGGTTTTCGATCAGTCGAAGGCGACGCCAGGAACATCGTTCCCCTACACCGGC GGCGCACTCGGCACGGCCAACCTGACCTTCGACACCACGACCGGCAAGCTCACCGGCGCGCCCACCAGCGTTTCATTTAC CGTGCCGGGCGGCGCGAGCCTCAATCTCGATCTGTCGAAGCTGACGCAGCTCGGCACCGGCTTCACGGTTTCCGACGCCC AGGTCAACGGCAACGCGCCCAGCACCATCGACAAGGTGCAGATCAGCAAGGACGGCACCATCTACGCCCAGTACAAGGAC GGCTCCACCAAGCCGCTCTACAAGATTCCACTGGCCGACGTGCAGAGCCCGGACCAACTCAAGGCCCTGCCCGGCAACGT CTATGCGCAAGGCACCGACTCCGGCGCGATCCGTGTCGGCTTTGCCAATGAAGGCAAGGCCGGTTCGATCATCTCTGGCG CACTCGAAAATTCCAACGTCGATATCGCCGAGGAATTGACCGACATGATCGCGGCGCAGCGCAGCTACACCGCCAATTCG AAAGTCTTCCAGACCGGTTCCGACCTGATGGATGTCCTTGTCAACCTGAAGAGATAA
Upstream 100 bases:
>100_bases GGCTACCGGCTCGTCTTCTGATGCCGCGCCGCGCCAGCCTCGCGCAAGACAGGACGCGTAGCCTCGCCGCCAGTGGCATG GATATTGCGGAGACATCTCG
Downstream 100 bases:
>100_bases ACCGGGCATGGCCCGTGAAAGACCAGCATGTCGCTATCTTCCGCATTGAGCATCGCCCAATCGGCGCTTATGAGTACCGC GCGTCAGACCAGCGTTGTCA
Product: flagellar hook protein FlgE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MSLYGMMRTGVSGMNAQANRLSTTADNIANSDTTGYKRSSAEFSTLIMPSTGGAYNSGGVTTTIRQAVSDPGVLQYTTSV SDLAVSGDGFFVVQDPSGTPFLTRAGAFVPDAQGRLVNAAGFQLMAYSYANGTPAATVNGFEGLQPVVISDQGLTATPST LGTYSGNLPAGATPVAAANLPGANASTAQYTSKSSMVAYDNLGNKKLLDVYFTNTGTGTWQVAVFDQSKATPGTSFPYTG GALGTANLTFDTTTGKLTGAPTSVSFTVPGGASLNLDLSKLTQLGTGFTVSDAQVNGNAPSTIDKVQISKDGTIYAQYKD GSTKPLYKIPLADVQSPDQLKALPGNVYAQGTDSGAIRVGFANEGKAGSIISGALENSNVDIAEELTDMIAAQRSYTANS KVFQTGSDLMDVLVNLKR
Sequences:
>Translated_418_residues MSLYGMMRTGVSGMNAQANRLSTTADNIANSDTTGYKRSSAEFSTLIMPSTGGAYNSGGVTTTIRQAVSDPGVLQYTTSV SDLAVSGDGFFVVQDPSGTPFLTRAGAFVPDAQGRLVNAAGFQLMAYSYANGTPAATVNGFEGLQPVVISDQGLTATPST LGTYSGNLPAGATPVAAANLPGANASTAQYTSKSSMVAYDNLGNKKLLDVYFTNTGTGTWQVAVFDQSKATPGTSFPYTG GALGTANLTFDTTTGKLTGAPTSVSFTVPGGASLNLDLSKLTQLGTGFTVSDAQVNGNAPSTIDKVQISKDGTIYAQYKD GSTKPLYKIPLADVQSPDQLKALPGNVYAQGTDSGAIRVGFANEGKAGSIISGALENSNVDIAEELTDMIAAQRSYTANS KVFQTGSDLMDVLVNLKR >Mature_417_residues SLYGMMRTGVSGMNAQANRLSTTADNIANSDTTGYKRSSAEFSTLIMPSTGGAYNSGGVTTTIRQAVSDPGVLQYTTSVS DLAVSGDGFFVVQDPSGTPFLTRAGAFVPDAQGRLVNAAGFQLMAYSYANGTPAATVNGFEGLQPVVISDQGLTATPSTL GTYSGNLPAGATPVAAANLPGANASTAQYTSKSSMVAYDNLGNKKLLDVYFTNTGTGTWQVAVFDQSKATPGTSFPYTGG ALGTANLTFDTTTGKLTGAPTSVSFTVPGGASLNLDLSKLTQLGTGFTVSDAQVNGNAPSTIDKVQISKDGTIYAQYKDG STKPLYKIPLADVQSPDQLKALPGNVYAQGTDSGAIRVGFANEGKAGSIISGALENSNVDIAEELTDMIAAQRSYTANSK VFQTGSDLMDVLVNLKR
Specific function: Unknown
COG id: COG1749
COG function: function code N; Flagellar hook protein FlgE
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787316, Length=419, Percent_Identity=32.6968973747017, Blast_Score=158, Evalue=5e-40, Organism=Escherichia coli, GI1787318, Length=129, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=5e-12,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR011491 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 [H]
Pfam domain/function: PF06429 DUF1078; PF07559 FlaE; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 42978; Mature: 42847
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLYGMMRTGVSGMNAQANRLSTTADNIANSDTTGYKRSSAEFSTLIMPSTGGAYNSGGV CCCHHHHHCCCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC TTTIRQAVSDPGVLQYTTSVSDLAVSGDGFFVVQDPSGTPFLTRAGAFVPDAQGRLVNAA HHHHHHHHCCCCEEEEECCCCCEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCEEECC GFQLMAYSYANGTPAATVNGFEGLQPVVISDQGLTATPSTLGTYSGNLPAGATPVAAANL CEEEEEEEECCCCCCEEECCCCCCCEEEEECCCCEECCCCCCCCCCCCCCCCCCEEECCC PGANASTAQYTSKSSMVAYDNLGNKKLLDVYFTNTGTGTWQVAVFDQSKATPGTSFPYTG CCCCCCCCEECCCCCEEEECCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCC GALGTANLTFDTTTGKLTGAPTSVSFTVPGGASLNLDLSKLTQLGTGFTVSDAQVNGNAP CCEEEEEEEEECCCCEEECCCCEEEEECCCCCEEEEEHHHHHHHCCCEEEECCEECCCCC STIDKVQISKDGTIYAQYKDGSTKPLYKIPLADVQSPDQLKALPGNVYAQGTDSGAIRVG CCEEEEEEECCCEEEEEECCCCCCCEEEECCCCCCCCHHHHCCCCCEEEECCCCCEEEEE FANEGKAGSIISGALENSNVDIAEELTDMIAAQRSYTANSKVFQTGSDLMDVLVNLKR ECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHCCC >Mature Secondary Structure SLYGMMRTGVSGMNAQANRLSTTADNIANSDTTGYKRSSAEFSTLIMPSTGGAYNSGGV CCHHHHHCCCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC TTTIRQAVSDPGVLQYTTSVSDLAVSGDGFFVVQDPSGTPFLTRAGAFVPDAQGRLVNAA HHHHHHHHCCCCEEEEECCCCCEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCEEECC GFQLMAYSYANGTPAATVNGFEGLQPVVISDQGLTATPSTLGTYSGNLPAGATPVAAANL CEEEEEEEECCCCCCEEECCCCCCCEEEEECCCCEECCCCCCCCCCCCCCCCCCEEECCC PGANASTAQYTSKSSMVAYDNLGNKKLLDVYFTNTGTGTWQVAVFDQSKATPGTSFPYTG CCCCCCCCEECCCCCEEEECCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCC GALGTANLTFDTTTGKLTGAPTSVSFTVPGGASLNLDLSKLTQLGTGFTVSDAQVNGNAP CCEEEEEEEEECCCCEEECCCCEEEEECCCCCEEEEEHHHHHHHCCCEEEECCEECCCCC STIDKVQISKDGTIYAQYKDGSTKPLYKIPLADVQSPDQLKALPGNVYAQGTDSGAIRVG CCEEEEEEECCCEEEEEECCCCCCCEEEECCCCCCCCHHHHCCCCCEEEECCCCCEEEEE FANEGKAGSIISGALENSNVDIAEELTDMIAAQRSYTANSKVFQTGSDLMDVLVNLKR ECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]