Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is flgE [H]

Identifier: 13472592

GI number: 13472592

Start: 2362216

End: 2363472

Strand: Direct

Name: flgE [H]

Synonym: mlr2937

Alternate gene names: 13472592

Gene position: 2362216-2363472 (Clockwise)

Preceding gene: 13472591

Following gene: 13472593

Centisome position: 33.57

GC content: 63.4

Gene sequence:

>1257_bases
ATGAGCCTCTACGGAATGATGCGGACCGGCGTTTCCGGCATGAACGCCCAGGCCAACCGCCTGTCGACAACCGCCGACAA
CATCGCGAACTCCGACACCACCGGCTACAAGCGGTCCTCGGCCGAGTTCTCGACCCTGATCATGCCATCGACGGGCGGCG
CCTATAATTCCGGCGGCGTCACCACCACGATCCGGCAGGCTGTCAGCGATCCGGGCGTGCTTCAGTACACGACCTCGGTC
TCCGACCTTGCCGTCAGCGGCGATGGTTTCTTCGTCGTCCAGGATCCGAGCGGCACACCTTTCCTGACCCGCGCCGGCGC
CTTCGTTCCCGATGCACAGGGCAGGCTGGTCAACGCGGCTGGCTTCCAGCTGATGGCCTACAGCTACGCCAATGGCACGC
CGGCGGCGACGGTGAACGGCTTCGAAGGTCTGCAGCCGGTCGTCATCTCCGACCAGGGCCTGACCGCGACGCCGAGCACC
CTGGGTACTTACAGCGGCAATCTGCCGGCAGGGGCGACGCCGGTCGCCGCCGCCAACCTGCCCGGCGCCAACGCCTCCAC
CGCGCAATACACCTCGAAATCGTCGATGGTCGCCTATGACAACCTCGGCAACAAGAAACTGCTCGACGTCTATTTCACCA
ACACCGGTACCGGCACCTGGCAGGTCGCGGTTTTCGATCAGTCGAAGGCGACGCCAGGAACATCGTTCCCCTACACCGGC
GGCGCACTCGGCACGGCCAACCTGACCTTCGACACCACGACCGGCAAGCTCACCGGCGCGCCCACCAGCGTTTCATTTAC
CGTGCCGGGCGGCGCGAGCCTCAATCTCGATCTGTCGAAGCTGACGCAGCTCGGCACCGGCTTCACGGTTTCCGACGCCC
AGGTCAACGGCAACGCGCCCAGCACCATCGACAAGGTGCAGATCAGCAAGGACGGCACCATCTACGCCCAGTACAAGGAC
GGCTCCACCAAGCCGCTCTACAAGATTCCACTGGCCGACGTGCAGAGCCCGGACCAACTCAAGGCCCTGCCCGGCAACGT
CTATGCGCAAGGCACCGACTCCGGCGCGATCCGTGTCGGCTTTGCCAATGAAGGCAAGGCCGGTTCGATCATCTCTGGCG
CACTCGAAAATTCCAACGTCGATATCGCCGAGGAATTGACCGACATGATCGCGGCGCAGCGCAGCTACACCGCCAATTCG
AAAGTCTTCCAGACCGGTTCCGACCTGATGGATGTCCTTGTCAACCTGAAGAGATAA

Upstream 100 bases:

>100_bases
GGCTACCGGCTCGTCTTCTGATGCCGCGCCGCGCCAGCCTCGCGCAAGACAGGACGCGTAGCCTCGCCGCCAGTGGCATG
GATATTGCGGAGACATCTCG

Downstream 100 bases:

>100_bases
ACCGGGCATGGCCCGTGAAAGACCAGCATGTCGCTATCTTCCGCATTGAGCATCGCCCAATCGGCGCTTATGAGTACCGC
GCGTCAGACCAGCGTTGTCA

Product: flagellar hook protein FlgE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MSLYGMMRTGVSGMNAQANRLSTTADNIANSDTTGYKRSSAEFSTLIMPSTGGAYNSGGVTTTIRQAVSDPGVLQYTTSV
SDLAVSGDGFFVVQDPSGTPFLTRAGAFVPDAQGRLVNAAGFQLMAYSYANGTPAATVNGFEGLQPVVISDQGLTATPST
LGTYSGNLPAGATPVAAANLPGANASTAQYTSKSSMVAYDNLGNKKLLDVYFTNTGTGTWQVAVFDQSKATPGTSFPYTG
GALGTANLTFDTTTGKLTGAPTSVSFTVPGGASLNLDLSKLTQLGTGFTVSDAQVNGNAPSTIDKVQISKDGTIYAQYKD
GSTKPLYKIPLADVQSPDQLKALPGNVYAQGTDSGAIRVGFANEGKAGSIISGALENSNVDIAEELTDMIAAQRSYTANS
KVFQTGSDLMDVLVNLKR

Sequences:

>Translated_418_residues
MSLYGMMRTGVSGMNAQANRLSTTADNIANSDTTGYKRSSAEFSTLIMPSTGGAYNSGGVTTTIRQAVSDPGVLQYTTSV
SDLAVSGDGFFVVQDPSGTPFLTRAGAFVPDAQGRLVNAAGFQLMAYSYANGTPAATVNGFEGLQPVVISDQGLTATPST
LGTYSGNLPAGATPVAAANLPGANASTAQYTSKSSMVAYDNLGNKKLLDVYFTNTGTGTWQVAVFDQSKATPGTSFPYTG
GALGTANLTFDTTTGKLTGAPTSVSFTVPGGASLNLDLSKLTQLGTGFTVSDAQVNGNAPSTIDKVQISKDGTIYAQYKD
GSTKPLYKIPLADVQSPDQLKALPGNVYAQGTDSGAIRVGFANEGKAGSIISGALENSNVDIAEELTDMIAAQRSYTANS
KVFQTGSDLMDVLVNLKR
>Mature_417_residues
SLYGMMRTGVSGMNAQANRLSTTADNIANSDTTGYKRSSAEFSTLIMPSTGGAYNSGGVTTTIRQAVSDPGVLQYTTSVS
DLAVSGDGFFVVQDPSGTPFLTRAGAFVPDAQGRLVNAAGFQLMAYSYANGTPAATVNGFEGLQPVVISDQGLTATPSTL
GTYSGNLPAGATPVAAANLPGANASTAQYTSKSSMVAYDNLGNKKLLDVYFTNTGTGTWQVAVFDQSKATPGTSFPYTGG
ALGTANLTFDTTTGKLTGAPTSVSFTVPGGASLNLDLSKLTQLGTGFTVSDAQVNGNAPSTIDKVQISKDGTIYAQYKDG
STKPLYKIPLADVQSPDQLKALPGNVYAQGTDSGAIRVGFANEGKAGSIISGALENSNVDIAEELTDMIAAQRSYTANSK
VFQTGSDLMDVLVNLKR

Specific function: Unknown

COG id: COG1749

COG function: function code N; Flagellar hook protein FlgE

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787316, Length=419, Percent_Identity=32.6968973747017, Blast_Score=158, Evalue=5e-40,
Organism=Escherichia coli, GI1787318, Length=129, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR011491
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013 [H]

Pfam domain/function: PF06429 DUF1078; PF07559 FlaE; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 42978; Mature: 42847

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLYGMMRTGVSGMNAQANRLSTTADNIANSDTTGYKRSSAEFSTLIMPSTGGAYNSGGV
CCCHHHHHCCCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC
TTTIRQAVSDPGVLQYTTSVSDLAVSGDGFFVVQDPSGTPFLTRAGAFVPDAQGRLVNAA
HHHHHHHHCCCCEEEEECCCCCEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCEEECC
GFQLMAYSYANGTPAATVNGFEGLQPVVISDQGLTATPSTLGTYSGNLPAGATPVAAANL
CEEEEEEEECCCCCCEEECCCCCCCEEEEECCCCEECCCCCCCCCCCCCCCCCCEEECCC
PGANASTAQYTSKSSMVAYDNLGNKKLLDVYFTNTGTGTWQVAVFDQSKATPGTSFPYTG
CCCCCCCCEECCCCCEEEECCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCC
GALGTANLTFDTTTGKLTGAPTSVSFTVPGGASLNLDLSKLTQLGTGFTVSDAQVNGNAP
CCEEEEEEEEECCCCEEECCCCEEEEECCCCCEEEEEHHHHHHHCCCEEEECCEECCCCC
STIDKVQISKDGTIYAQYKDGSTKPLYKIPLADVQSPDQLKALPGNVYAQGTDSGAIRVG
CCEEEEEEECCCEEEEEECCCCCCCEEEECCCCCCCCHHHHCCCCCEEEECCCCCEEEEE
FANEGKAGSIISGALENSNVDIAEELTDMIAAQRSYTANSKVFQTGSDLMDVLVNLKR
ECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHCCC
>Mature Secondary Structure 
SLYGMMRTGVSGMNAQANRLSTTADNIANSDTTGYKRSSAEFSTLIMPSTGGAYNSGGV
CCHHHHHCCCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC
TTTIRQAVSDPGVLQYTTSVSDLAVSGDGFFVVQDPSGTPFLTRAGAFVPDAQGRLVNAA
HHHHHHHHCCCCEEEEECCCCCEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCEEECC
GFQLMAYSYANGTPAATVNGFEGLQPVVISDQGLTATPSTLGTYSGNLPAGATPVAAANL
CEEEEEEEECCCCCCEEECCCCCCCEEEEECCCCEECCCCCCCCCCCCCCCCCCEEECCC
PGANASTAQYTSKSSMVAYDNLGNKKLLDVYFTNTGTGTWQVAVFDQSKATPGTSFPYTG
CCCCCCCCEECCCCCEEEECCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCC
GALGTANLTFDTTTGKLTGAPTSVSFTVPGGASLNLDLSKLTQLGTGFTVSDAQVNGNAP
CCEEEEEEEEECCCCEEECCCCEEEEECCCCCEEEEEHHHHHHHCCCEEEECCEECCCCC
STIDKVQISKDGTIYAQYKDGSTKPLYKIPLADVQSPDQLKALPGNVYAQGTDSGAIRVG
CCEEEEEEECCCEEEEEECCCCCCCEEEECCCCCCCCHHHHCCCCCEEEECCCCCEEEEE
FANEGKAGSIISGALENSNVDIAEELTDMIAAQRSYTANSKVFQTGSDLMDVLVNLKR
ECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]