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The map label for this gene is yhgF [C]

Identifier: 13472550

GI number: 13472550

Start: 2320445

End: 2322769

Strand: Reverse

Name: yhgF [C]

Synonym: mll2881

Alternate gene names: 13472550

Gene position: 2322769-2320445 (Counterclockwise)

Preceding gene: 13472551

Following gene: 13472548

Centisome position: 33.01

GC content: 67.78

Gene sequence:

>2325_bases
ATGGCATCTGACATCAAGCGCATCGCAGCCATCATCGCGGCCGAGATCAAGGCGCGGCCCGAACAGGCGGCCGCCGCGAT
CGAATTGCTCGACGAGGGCGCGACGGTGCCGTTCGTGGCGCGCTACCGCAAGGAGGTGACCGGCGGGCTGGACGACACCC
AGTTGCGCGACCTTGCCGAGCGGCTCGCCTATCTGCGCGAGCTCGACGCCCGCCGCGACACCATCCTCGGCTCGATCCGG
GAGCAGGGCAAGCTGACCGAGGAACTGGAAACCAAGATCGCAGCGGCTGCCACCAAGGCGGAACTCGAGGACATCTATCT
GCCCTACAAGCCGAAGCGCCGCACCAAGGCCGAGATTGCCCGCGAACGCGGGCTGGGACCGCTGGCCGAGGCCATCCTCG
CGAACCGCGCGCTGGTGCCCGCGGAACTGGCGCTGGGCTATGTCACCGAGGAGGTGGCCGACGCCAAGGCGGCCCTTGAA
GGCGCGCGCGACATCCTGTCGGAACAGTTCGCCGAGAATGCCGACCTGGTCGGCAAATTGCGCACCTACATGAAGGATCG
CGCCTTCATGCGCGCCCGTGTCGTCGATGGCAAGCAGGAGGCCGGCGCCAAATTCTCCGACTATTTCGACCATGTCGAGC
GCTGGGCAAACGTGCCGAGCCATCGCGCGCTGGCCATGCTGCGCGGCCGCAACGAAGAGGTGCTGTCGCTCGACATCGAG
GTCGATGCCGACGACGCGTCGCCGGTGAAACCGGTCGAACGGATGATCGCAAACGCCTATGCGATCGGCGGCAGCCTGCC
CGGCGACCGCTGGCTGATGGACGTCGCCGGCTGGACCTGGCGCGTCAAGCTTTCGCTGCACCTGACGCTCGATCTCATGC
GCGATCTGCGCGAGCGGGCCGAGGAAGAGGCGATCCACGTCTTCGCCCGCAATCTCAAGGATTTGCTGCTCGCCGCGCCC
GCTGGGTCGCGGCCGACCATGGGGCTCGACCCCGGCATCCGCACCGGCGTCAAGGTGGCCGTGGTCGACGGCACCGGCAA
GCTGGTGGCGACGACGACGGTCTATCCCTTCCCGCCGAAGAATGATGTGCGCGGCACGCAGGCCGAACTCGCCAAGCTCA
TCCGCCTGCACAAGGTCGAGCTGATTTCGATCGGCAACGGTACAGGCAGCCGCGAGACGGAAAAGCTGGTGGCGGACATG
CTCTCCGACATGCCTTCCGACGGCGGGCCGAAGCCGCTCAAGGTGATCGTTAGCGAGGCGGGCGCCTCGGTCTATTCGGC
ATCGGCAACGGCGGCAGCGGAATTTCCCGGCCTCGACGTGTCGTTGCGCGGTGCTGTGTCCATTGCGCGGCGCCTGCAGG
ATCCGCTGGCCGAACTGGTCAAGATCGAACCCAAGTCGATCGGCGTCGGCCAGTATCAGCACGATGTCGACCAGTACCGG
CTCGGCCGCTCGCTGGAGGCGGTGGTCGAGGACGCGGTCAATGCGGTGGGCGTCGATCTCAACACCGCTTCGGCGCCGCT
GCTGGCGCGTGTTTCGGGCCTTGGCGCGTCGCTCGCCGACGCCATCGTCGCGCATCGCGACGCCACCGGCCCGTTCGCCA
GCCGCAAGGACCTGCTCAAGGTGCCGCGGCTAGGGCCACGCGCCTTCGAACAGTCCGCCGGCTTCCTGCGCATCGCCAAT
GGCAGCGAGCCGCTCGATGCCTCGTCGGTGCATCCGGAAGCCTATGGCGTGGCCAAGAAGATCGTCGCCGCCTGCGGCCG
CGACGTGCGCTCGCTGATGGGCGACAGTGCCGCGCTCAAGGCGCTCGATCCGCGCGTCTTCGTTGACGAGCGTTTCGGCC
TGCCGACGGTGCGCGACATTCTGGCGGAGCTGGAAAAGCCCGGCCGCGATCCGCGCCCCGGCTTCAAGACGGCGACCTTC
GCCGACGGTGTCGACGACATCAAGGACCTCAAACCCGGCATGCTGCTGGAAGGCACAGTGACCAATGTCGCGGCCTTTGG
CGCCTTCGTCGATATCGGTGTCCATCAGGACGGGCTGGTGCACGTCTCGCAATTGGCCGACCGCTTCATCAAGGACGCGC
ATGAGGTGGTCAAGGCAGGGGATGTGGTGAAGGTGCGCGTCGTCGACGTCGACATCAAGCGCAAGCGCATCGCGCTCTCC
ATGCGCAAGGATGGCGGCGAGGGCGGCGCATCTCGTGGCGGGCCGCGCGACAATGGCGGCGGCAGGCCGGCGCCGCGCTC
GCCAGCGCCGCAACGCCAGCCGGAACGGCCGGCCCAGCAAGGGGCCTTCGGTGCGGCGCTGGCCGATGCGCTGAAGCGCA
AGTAG

Upstream 100 bases:

>100_bases
GCTTTCCTGTGGACCGCCCGCGACGGTTGAAAACGTCGCGGTTGGCGGAGCTGGCATCTGCGCCTATGGTCGCCGCTCTT
TTGATGAGAGCAGGAACGAC

Downstream 100 bases:

>100_bases
CTACCACGCCAGAACAGCCGGCTCCTTCTCGACCTGCTCCAGCAGCCAGTCGCGAAAGCTGGCCACCGGGGGATGTTCGC
GCTTGTCGTGCGGGACGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 774; Mature: 773

Protein sequence:

>774_residues
MASDIKRIAAIIAAEIKARPEQAAAAIELLDEGATVPFVARYRKEVTGGLDDTQLRDLAERLAYLRELDARRDTILGSIR
EQGKLTEELETKIAAAATKAELEDIYLPYKPKRRTKAEIARERGLGPLAEAILANRALVPAELALGYVTEEVADAKAALE
GARDILSEQFAENADLVGKLRTYMKDRAFMRARVVDGKQEAGAKFSDYFDHVERWANVPSHRALAMLRGRNEEVLSLDIE
VDADDASPVKPVERMIANAYAIGGSLPGDRWLMDVAGWTWRVKLSLHLTLDLMRDLRERAEEEAIHVFARNLKDLLLAAP
AGSRPTMGLDPGIRTGVKVAVVDGTGKLVATTTVYPFPPKNDVRGTQAELAKLIRLHKVELISIGNGTGSRETEKLVADM
LSDMPSDGGPKPLKVIVSEAGASVYSASATAAAEFPGLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVDQYR
LGRSLEAVVEDAVNAVGVDLNTASAPLLARVSGLGASLADAIVAHRDATGPFASRKDLLKVPRLGPRAFEQSAGFLRIAN
GSEPLDASSVHPEAYGVAKKIVAACGRDVRSLMGDSAALKALDPRVFVDERFGLPTVRDILAELEKPGRDPRPGFKTATF
ADGVDDIKDLKPGMLLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFIKDAHEVVKAGDVVKVRVVDVDIKRKRIALS
MRKDGGEGGASRGGPRDNGGGRPAPRSPAPQRQPERPAQQGAFGAALADALKRK

Sequences:

>Translated_774_residues
MASDIKRIAAIIAAEIKARPEQAAAAIELLDEGATVPFVARYRKEVTGGLDDTQLRDLAERLAYLRELDARRDTILGSIR
EQGKLTEELETKIAAAATKAELEDIYLPYKPKRRTKAEIARERGLGPLAEAILANRALVPAELALGYVTEEVADAKAALE
GARDILSEQFAENADLVGKLRTYMKDRAFMRARVVDGKQEAGAKFSDYFDHVERWANVPSHRALAMLRGRNEEVLSLDIE
VDADDASPVKPVERMIANAYAIGGSLPGDRWLMDVAGWTWRVKLSLHLTLDLMRDLRERAEEEAIHVFARNLKDLLLAAP
AGSRPTMGLDPGIRTGVKVAVVDGTGKLVATTTVYPFPPKNDVRGTQAELAKLIRLHKVELISIGNGTGSRETEKLVADM
LSDMPSDGGPKPLKVIVSEAGASVYSASATAAAEFPGLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVDQYR
LGRSLEAVVEDAVNAVGVDLNTASAPLLARVSGLGASLADAIVAHRDATGPFASRKDLLKVPRLGPRAFEQSAGFLRIAN
GSEPLDASSVHPEAYGVAKKIVAACGRDVRSLMGDSAALKALDPRVFVDERFGLPTVRDILAELEKPGRDPRPGFKTATF
ADGVDDIKDLKPGMLLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFIKDAHEVVKAGDVVKVRVVDVDIKRKRIALS
MRKDGGEGGASRGGPRDNGGGRPAPRSPAPQRQPERPAQQGAFGAALADALKRK
>Mature_773_residues
ASDIKRIAAIIAAEIKARPEQAAAAIELLDEGATVPFVARYRKEVTGGLDDTQLRDLAERLAYLRELDARRDTILGSIRE
QGKLTEELETKIAAAATKAELEDIYLPYKPKRRTKAEIARERGLGPLAEAILANRALVPAELALGYVTEEVADAKAALEG
ARDILSEQFAENADLVGKLRTYMKDRAFMRARVVDGKQEAGAKFSDYFDHVERWANVPSHRALAMLRGRNEEVLSLDIEV
DADDASPVKPVERMIANAYAIGGSLPGDRWLMDVAGWTWRVKLSLHLTLDLMRDLRERAEEEAIHVFARNLKDLLLAAPA
GSRPTMGLDPGIRTGVKVAVVDGTGKLVATTTVYPFPPKNDVRGTQAELAKLIRLHKVELISIGNGTGSRETEKLVADML
SDMPSDGGPKPLKVIVSEAGASVYSASATAAAEFPGLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVDQYRL
GRSLEAVVEDAVNAVGVDLNTASAPLLARVSGLGASLADAIVAHRDATGPFASRKDLLKVPRLGPRAFEQSAGFLRIANG
SEPLDASSVHPEAYGVAKKIVAACGRDVRSLMGDSAALKALDPRVFVDERFGLPTVRDILAELEKPGRDPRPGFKTATFA
DGVDDIKDLKPGMLLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFIKDAHEVVKAGDVVKVRVVDVDIKRKRIALSM
RKDGGEGGASRGGPRDNGGGRPAPRSPAPQRQPERPAQQGAFGAALADALKRK

Specific function: Unknown

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=805, Percent_Identity=31.4285714285714, Blast_Score=345, Evalue=1e-94,
Organism=Homo sapiens, GI27597090, Length=734, Percent_Identity=22.7520435967302, Blast_Score=98, Evalue=3e-20,
Organism=Escherichia coli, GI87082262, Length=757, Percent_Identity=60.7661822985469, Blast_Score=870, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17511129, Length=709, Percent_Identity=29.1960507757405, Blast_Score=236, Evalue=3e-62,
Organism=Caenorhabditis elegans, GI17552892, Length=339, Percent_Identity=29.7935103244838, Blast_Score=86, Evalue=7e-17,
Organism=Saccharomyces cerevisiae, GI6321552, Length=197, Percent_Identity=28.9340101522843, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI62484314, Length=765, Percent_Identity=31.6339869281046, Blast_Score=362, Evalue=1e-100,
Organism=Drosophila melanogaster, GI24640080, Length=536, Percent_Identity=22.9477611940299, Blast_Score=82, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 83162; Mature: 83031

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASDIKRIAAIIAAEIKARPEQAAAAIELLDEGATVPFVARYRKEVTGGLDDTQLRDLAE
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
RLAYLRELDARRDTILGSIREQGKLTEELETKIAAAATKAELEDIYLPYKPKRRTKAEIA
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
RERGLGPLAEAILANRALVPAELALGYVTEEVADAKAALEGARDILSEQFAENADLVGKL
HHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RTYMKDRAFMRARVVDGKQEAGAKFSDYFDHVERWANVPSHRALAMLRGRNEEVLSLDIE
HHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEE
VDADDASPVKPVERMIANAYAIGGSLPGDRWLMDVAGWTWRVKLSLHLTLDLMRDLRERA
ECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEHCCCCCEEEEEEEEEHHHHHHHHHHHHH
EEEAIHVFARNLKDLLLAAPAGSRPTMGLDPGIRTGVKVAVVDGTGKLVATTTVYPFPPK
HHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCC
NDVRGTQAELAKLIRLHKVELISIGNGTGSRETEKLVADMLSDMPSDGGPKPLKVIVSEA
CCCCCCHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
GASVYSASATAAAEFPGLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVDQYR
CCHHEECCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
LGRSLEAVVEDAVNAVGVDLNTASAPLLARVSGLGASLADAIVAHRDATGPFASRKDLLK
HCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHH
VPRLGPRAFEQSAGFLRIANGSEPLDASSVHPEAYGVAKKIVAACGRDVRSLMGDSAALK
CCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHCCHHHHH
ALDPRVFVDERFGLPTVRDILAELEKPGRDPRPGFKTATFADGVDDIKDLKPGMLLEGTV
HCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHCCHHHHHHCCCCEEECCHH
TNVAAFGAFVDIGVHQDGLVHVSQLADRFIKDAHEVVKAGDVVKVRVVDVDIKRKRIALS
HHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHEEE
MRKDGGEGGASRGGPRDNGGGRPAPRSPAPQRQPERPAQQGAFGAALADALKRK
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCC
>Mature Secondary Structure 
ASDIKRIAAIIAAEIKARPEQAAAAIELLDEGATVPFVARYRKEVTGGLDDTQLRDLAE
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
RLAYLRELDARRDTILGSIREQGKLTEELETKIAAAATKAELEDIYLPYKPKRRTKAEIA
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
RERGLGPLAEAILANRALVPAELALGYVTEEVADAKAALEGARDILSEQFAENADLVGKL
HHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RTYMKDRAFMRARVVDGKQEAGAKFSDYFDHVERWANVPSHRALAMLRGRNEEVLSLDIE
HHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEE
VDADDASPVKPVERMIANAYAIGGSLPGDRWLMDVAGWTWRVKLSLHLTLDLMRDLRERA
ECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEHCCCCCEEEEEEEEEHHHHHHHHHHHHH
EEEAIHVFARNLKDLLLAAPAGSRPTMGLDPGIRTGVKVAVVDGTGKLVATTTVYPFPPK
HHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCC
NDVRGTQAELAKLIRLHKVELISIGNGTGSRETEKLVADMLSDMPSDGGPKPLKVIVSEA
CCCCCCHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
GASVYSASATAAAEFPGLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVDQYR
CCHHEECCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
LGRSLEAVVEDAVNAVGVDLNTASAPLLARVSGLGASLADAIVAHRDATGPFASRKDLLK
HCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHH
VPRLGPRAFEQSAGFLRIANGSEPLDASSVHPEAYGVAKKIVAACGRDVRSLMGDSAALK
CCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHCCHHHHH
ALDPRVFVDERFGLPTVRDILAELEKPGRDPRPGFKTATFADGVDDIKDLKPGMLLEGTV
HCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHCCHHHHHHCCCCEEECCHH
TNVAAFGAFVDIGVHQDGLVHVSQLADRFIKDAHEVVKAGDVVKVRVVDVDIKRKRIALS
HHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHEEE
MRKDGGEGGASRGGPRDNGGGRPAPRSPAPQRQPERPAQQGAFGAALADALKRK
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]