| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472519
Identifier: 13472519
GI number: 13472519
Start: 2279715
End: 2280383
Strand: Reverse
Name: 13472519
Synonym: mll2846
Alternate gene names: NA
Gene position: 2280383-2279715 (Counterclockwise)
Preceding gene: 13472520
Following gene: 13472518
Centisome position: 32.41
GC content: 66.67
Gene sequence:
>669_bases ATGAGCCAGCAGGACCAGTTCACGTCCGTAAAACGCAGCAGCCCGGCCGTCGAGGCGGACCGGCAGCGGCTCGTCGAACC GGCCCGCCGGCGATGGCCGCGCGTCGTCGGATTTTCACTGTTGGGGCTCGTCGTGGCGGGCCTTGGCTTCGCCGCCGGGA ACTATGCCGCGATCGCAAATCTGGTCGGCAGCGCGACGGCCGCACAGGCTGAGACAGCCAACCCGGCGCTTCCGGACTCG CCTTTCCTCGAGCACGTCAAGCAGGCCGGCGTGCAGGCCTGTTCGACCATCTACCCGGTGCTCGGGCAGGTCTTGACGAC AGGCGCGAAATACAGCGTCAAATCCCTGTGGAACGACCAGGCCGCCGACAAGCATGCGGTCCAGGCCTTCGTCGGCATGG ACTATGCGACGGAACGCTATAGCGGGCCTGCCGCCGGCGTCGTTTTCGCATCGCCCACCGCTTCGGGTTGCGAGGGGACG ATGGTGCGGGTGGCGCCGTTCGCCAGCCCCTGCGCCGACCTGCCGTCCATTCTTCCGCAAGGCAGCAAGATCACCGACCA TCTCGGGCAGGTGGAGGTGTACGAGCTCGGCGGCAATGCCGGTGAGGCCCTTCTCTTGCCGACAGGCAAAAGCTGCGTGG TGATCTCCGTCGCTTCAGCGGCGAAGTAG
Upstream 100 bases:
>100_bases TCCTATTCCACCGTCGACGGCAAGACGATCACCGTGACCGCAGCAACACTGAAGGGGCTGTCGGCAGCCCTTTCGCCACT CAAATGACCGGGGCAACACA
Downstream 100 bases:
>100_bases GCGAAGCGACCAGGATCAAGGAAAGGGGTGCCGACCATGAGATTGCGGGCTTTGGCAGTTTTGGGCTTGACCTTGTTGTG GAGCGGACACGTCGTCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MSQQDQFTSVKRSSPAVEADRQRLVEPARRRWPRVVGFSLLGLVVAGLGFAAGNYAAIANLVGSATAAQAETANPALPDS PFLEHVKQAGVQACSTIYPVLGQVLTTGAKYSVKSLWNDQAADKHAVQAFVGMDYATERYSGPAAGVVFASPTASGCEGT MVRVAPFASPCADLPSILPQGSKITDHLGQVEVYELGGNAGEALLLPTGKSCVVISVASAAK
Sequences:
>Translated_222_residues MSQQDQFTSVKRSSPAVEADRQRLVEPARRRWPRVVGFSLLGLVVAGLGFAAGNYAAIANLVGSATAAQAETANPALPDS PFLEHVKQAGVQACSTIYPVLGQVLTTGAKYSVKSLWNDQAADKHAVQAFVGMDYATERYSGPAAGVVFASPTASGCEGT MVRVAPFASPCADLPSILPQGSKITDHLGQVEVYELGGNAGEALLLPTGKSCVVISVASAAK >Mature_221_residues SQQDQFTSVKRSSPAVEADRQRLVEPARRRWPRVVGFSLLGLVVAGLGFAAGNYAAIANLVGSATAAQAETANPALPDSP FLEHVKQAGVQACSTIYPVLGQVLTTGAKYSVKSLWNDQAADKHAVQAFVGMDYATERYSGPAAGVVFASPTASGCEGTM VRVAPFASPCADLPSILPQGSKITDHLGQVEVYELGGNAGEALLLPTGKSCVVISVASAAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22976; Mature: 22845
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQQDQFTSVKRSSPAVEADRQRLVEPARRRWPRVVGFSLLGLVVAGLGFAAGNYAAIAN CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHH LVGSATAAQAETANPALPDSPFLEHVKQAGVQACSTIYPVLGQVLTTGAKYSVKSLWNDQ HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHH AADKHAVQAFVGMDYATERYSGPAAGVVFASPTASGCEGTMVRVAPFASPCADLPSILPQ CHHHHHHHHHHHCCHHHHHCCCCCCEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHCCC GSKITDHLGQVEVYELGGNAGEALLLPTGKSCVVISVASAAK CCHHHHHHCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCC >Mature Secondary Structure SQQDQFTSVKRSSPAVEADRQRLVEPARRRWPRVVGFSLLGLVVAGLGFAAGNYAAIAN CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHH LVGSATAAQAETANPALPDSPFLEHVKQAGVQACSTIYPVLGQVLTTGAKYSVKSLWNDQ HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHH AADKHAVQAFVGMDYATERYSGPAAGVVFASPTASGCEGTMVRVAPFASPCADLPSILPQ CHHHHHHHHHHHCCHHHHHCCCCCCEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHCCC GSKITDHLGQVEVYELGGNAGEALLLPTGKSCVVISVASAAK CCHHHHHHCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA