Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13472519

Identifier: 13472519

GI number: 13472519

Start: 2279715

End: 2280383

Strand: Reverse

Name: 13472519

Synonym: mll2846

Alternate gene names: NA

Gene position: 2280383-2279715 (Counterclockwise)

Preceding gene: 13472520

Following gene: 13472518

Centisome position: 32.41

GC content: 66.67

Gene sequence:

>669_bases
ATGAGCCAGCAGGACCAGTTCACGTCCGTAAAACGCAGCAGCCCGGCCGTCGAGGCGGACCGGCAGCGGCTCGTCGAACC
GGCCCGCCGGCGATGGCCGCGCGTCGTCGGATTTTCACTGTTGGGGCTCGTCGTGGCGGGCCTTGGCTTCGCCGCCGGGA
ACTATGCCGCGATCGCAAATCTGGTCGGCAGCGCGACGGCCGCACAGGCTGAGACAGCCAACCCGGCGCTTCCGGACTCG
CCTTTCCTCGAGCACGTCAAGCAGGCCGGCGTGCAGGCCTGTTCGACCATCTACCCGGTGCTCGGGCAGGTCTTGACGAC
AGGCGCGAAATACAGCGTCAAATCCCTGTGGAACGACCAGGCCGCCGACAAGCATGCGGTCCAGGCCTTCGTCGGCATGG
ACTATGCGACGGAACGCTATAGCGGGCCTGCCGCCGGCGTCGTTTTCGCATCGCCCACCGCTTCGGGTTGCGAGGGGACG
ATGGTGCGGGTGGCGCCGTTCGCCAGCCCCTGCGCCGACCTGCCGTCCATTCTTCCGCAAGGCAGCAAGATCACCGACCA
TCTCGGGCAGGTGGAGGTGTACGAGCTCGGCGGCAATGCCGGTGAGGCCCTTCTCTTGCCGACAGGCAAAAGCTGCGTGG
TGATCTCCGTCGCTTCAGCGGCGAAGTAG

Upstream 100 bases:

>100_bases
TCCTATTCCACCGTCGACGGCAAGACGATCACCGTGACCGCAGCAACACTGAAGGGGCTGTCGGCAGCCCTTTCGCCACT
CAAATGACCGGGGCAACACA

Downstream 100 bases:

>100_bases
GCGAAGCGACCAGGATCAAGGAAAGGGGTGCCGACCATGAGATTGCGGGCTTTGGCAGTTTTGGGCTTGACCTTGTTGTG
GAGCGGACACGTCGTCTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSQQDQFTSVKRSSPAVEADRQRLVEPARRRWPRVVGFSLLGLVVAGLGFAAGNYAAIANLVGSATAAQAETANPALPDS
PFLEHVKQAGVQACSTIYPVLGQVLTTGAKYSVKSLWNDQAADKHAVQAFVGMDYATERYSGPAAGVVFASPTASGCEGT
MVRVAPFASPCADLPSILPQGSKITDHLGQVEVYELGGNAGEALLLPTGKSCVVISVASAAK

Sequences:

>Translated_222_residues
MSQQDQFTSVKRSSPAVEADRQRLVEPARRRWPRVVGFSLLGLVVAGLGFAAGNYAAIANLVGSATAAQAETANPALPDS
PFLEHVKQAGVQACSTIYPVLGQVLTTGAKYSVKSLWNDQAADKHAVQAFVGMDYATERYSGPAAGVVFASPTASGCEGT
MVRVAPFASPCADLPSILPQGSKITDHLGQVEVYELGGNAGEALLLPTGKSCVVISVASAAK
>Mature_221_residues
SQQDQFTSVKRSSPAVEADRQRLVEPARRRWPRVVGFSLLGLVVAGLGFAAGNYAAIANLVGSATAAQAETANPALPDSP
FLEHVKQAGVQACSTIYPVLGQVLTTGAKYSVKSLWNDQAADKHAVQAFVGMDYATERYSGPAAGVVFASPTASGCEGTM
VRVAPFASPCADLPSILPQGSKITDHLGQVEVYELGGNAGEALLLPTGKSCVVISVASAAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22976; Mature: 22845

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQQDQFTSVKRSSPAVEADRQRLVEPARRRWPRVVGFSLLGLVVAGLGFAAGNYAAIAN
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
LVGSATAAQAETANPALPDSPFLEHVKQAGVQACSTIYPVLGQVLTTGAKYSVKSLWNDQ
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHH
AADKHAVQAFVGMDYATERYSGPAAGVVFASPTASGCEGTMVRVAPFASPCADLPSILPQ
CHHHHHHHHHHHCCHHHHHCCCCCCEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHCCC
GSKITDHLGQVEVYELGGNAGEALLLPTGKSCVVISVASAAK
CCHHHHHHCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCC
>Mature Secondary Structure 
SQQDQFTSVKRSSPAVEADRQRLVEPARRRWPRVVGFSLLGLVVAGLGFAAGNYAAIAN
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
LVGSATAAQAETANPALPDSPFLEHVKQAGVQACSTIYPVLGQVLTTGAKYSVKSLWNDQ
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHH
AADKHAVQAFVGMDYATERYSGPAAGVVFASPTASGCEGTMVRVAPFASPCADLPSILPQ
CHHHHHHHHHHHCCHHHHHCCCCCCEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHCCC
GSKITDHLGQVEVYELGGNAGEALLLPTGKSCVVISVASAAK
CCHHHHHHCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA