| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472514
Identifier: 13472514
GI number: 13472514
Start: 2275354
End: 2276238
Strand: Direct
Name: 13472514
Synonym: mlr2838
Alternate gene names: NA
Gene position: 2275354-2276238 (Clockwise)
Preceding gene: 13472513
Following gene: 13472515
Centisome position: 32.34
GC content: 59.55
Gene sequence:
>885_bases GTGGGGCGCCATCTAGCAAAAGCGTTGCCCTCCGTAAGAACTAGCGTCCGTCCTCTCCGTGCTGTAAAAATGGACTACCG ACGCCGACCTCGACGCCGTCCTAAGGCCGACCGCCATTTCAGCATGCCCAAGGACGTATGTGCCGCACATGGACTCAAGC CACCCGCCCGCACATCCGTTGTTTGGATTGACCCGCGAGGAGGGATCAGCATGTCAGAACGTCTCAACATAGGCCCGCTG CGACCTGGCGAAACGGCGCCCAATGTCGTGCTCGACGCGATTACCCGCGAGGGCAAGATCGCCATCGACGATTTCCGAGG CGAGAAACCAGTGCTGGTTGGGCTGTATCGAGGTCTCCATTGTCCTTTTTGCAGGCGCCATATCGCCATGCTTTCGCAAC TCACCCCAGCGCTCAACGAGAAGGGCATCGAAAGCCTGACAGTGGTCAACACGCCCATCGAGCGGGCGCGCCTCTATCTG CGGTACCATCCGATGCTCGGCCTACTCGCGGCATCCGATCCGGAGCGGGCTTCACACCGCGCCTTTGGATTGCCGAATAT GCAGATCACCGAAGACGAGAGCGCATGGCCGCAAAAGGTTTCGATGAGCGATGTGAAGTCGATGCGGGTCGACTTGCCGG GCGAGATGCCGGAACCGATGGACCCGTTTGCGGCGCTCGAATACCTGAACAAAAAGGACAGCTACGATATCACCGAAGCG GATCAACAGATGATGGCCACCGGCATTGGGCAACTCGTCGGCCAATTCTTGCTGGACCGCGATGGCGTCGTTCGCTGGAC CTCCAACGAGGTACTCGATGGCGGCCTATTCGGTGCCCCGAACACTCAGGAGCTGATGTCGGCAGCGTCGCAAATCGGAA GGTAA
Upstream 100 bases:
>100_bases AGCTCAACGAAGCGCGACCTGTCAGACTTGAGGACAGCCTCGGCGAAGTCCGGCACTTCCAGACCTTGGCGCACCTTAGT ATCAAGAGCCTGCTCAGCTC
Downstream 100 bases:
>100_bases GGCGCGGCTTCGCTAGGCGGGGCTAGGCGCAGGATTACGCGAAGTTGGCGGCCGTCGCCTGTTGGGCCCCACAATCGGCA CCGCTCCCGCCTGCCGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MGRHLAKALPSVRTSVRPLRAVKMDYRRRPRRRPKADRHFSMPKDVCAAHGLKPPARTSVVWIDPRGGISMSERLNIGPL RPGETAPNVVLDAITREGKIAIDDFRGEKPVLVGLYRGLHCPFCRRHIAMLSQLTPALNEKGIESLTVVNTPIERARLYL RYHPMLGLLAASDPERASHRAFGLPNMQITEDESAWPQKVSMSDVKSMRVDLPGEMPEPMDPFAALEYLNKKDSYDITEA DQQMMATGIGQLVGQFLLDRDGVVRWTSNEVLDGGLFGAPNTQELMSAASQIGR
Sequences:
>Translated_294_residues MGRHLAKALPSVRTSVRPLRAVKMDYRRRPRRRPKADRHFSMPKDVCAAHGLKPPARTSVVWIDPRGGISMSERLNIGPL RPGETAPNVVLDAITREGKIAIDDFRGEKPVLVGLYRGLHCPFCRRHIAMLSQLTPALNEKGIESLTVVNTPIERARLYL RYHPMLGLLAASDPERASHRAFGLPNMQITEDESAWPQKVSMSDVKSMRVDLPGEMPEPMDPFAALEYLNKKDSYDITEA DQQMMATGIGQLVGQFLLDRDGVVRWTSNEVLDGGLFGAPNTQELMSAASQIGR >Mature_293_residues GRHLAKALPSVRTSVRPLRAVKMDYRRRPRRRPKADRHFSMPKDVCAAHGLKPPARTSVVWIDPRGGISMSERLNIGPLR PGETAPNVVLDAITREGKIAIDDFRGEKPVLVGLYRGLHCPFCRRHIAMLSQLTPALNEKGIESLTVVNTPIERARLYLR YHPMLGLLAASDPERASHRAFGLPNMQITEDESAWPQKVSMSDVKSMRVDLPGEMPEPMDPFAALEYLNKKDSYDITEAD QQMMATGIGQLVGQFLLDRDGVVRWTSNEVLDGGLFGAPNTQELMSAASQIGR
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32743; Mature: 32612
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRHLAKALPSVRTSVRPLRAVKMDYRRRPRRRPKADRHFSMPKDVCAAHGLKPPARTSV CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEE VWIDPRGGISMSERLNIGPLRPGETAPNVVLDAITREGKIAIDDFRGEKPVLVGLYRGLH EEECCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCEEEEHHHCCC CPFCRRHIAMLSQLTPALNEKGIESLTVVNTPIERARLYLRYHPMLGLLAASDPERASHR CHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHEECCHHHHHCCCCCHHHHHH AFGLPNMQITEDESAWPQKVSMSDVKSMRVDLPGEMPEPMDPFAALEYLNKKDSYDITEA HCCCCCCEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHH DQQMMATGIGQLVGQFLLDRDGVVRWTSNEVLDGGLFGAPNTQELMSAASQIGR HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure GRHLAKALPSVRTSVRPLRAVKMDYRRRPRRRPKADRHFSMPKDVCAAHGLKPPARTSV CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEE VWIDPRGGISMSERLNIGPLRPGETAPNVVLDAITREGKIAIDDFRGEKPVLVGLYRGLH EEECCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCEEEEHHHCCC CPFCRRHIAMLSQLTPALNEKGIESLTVVNTPIERARLYLRYHPMLGLLAASDPERASHR CHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHEECCHHHHHCCCCCHHHHHH AFGLPNMQITEDESAWPQKVSMSDVKSMRVDLPGEMPEPMDPFAALEYLNKKDSYDITEA HCCCCCCEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHH DQQMMATGIGQLVGQFLLDRDGVVRWTSNEVLDGGLFGAPNTQELMSAASQIGR HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA