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The map label for this gene is ydhP [H]

Identifier: 13472465

GI number: 13472465

Start: 2224169

End: 2225344

Strand: Direct

Name: ydhP [H]

Synonym: mlr2770

Alternate gene names: 13472465

Gene position: 2224169-2225344 (Clockwise)

Preceding gene: 13472464

Following gene: 13472466

Centisome position: 31.61

GC content: 66.75

Gene sequence:

>1176_bases
ATGCCTTTGCCGATCCTTGCGCTTGCCATTGCGTCCTTCTGCATCGGCACCACCGAATTCGTCATCATGGGCCTGCTACC
GGAGGTCGCCGCCGACCTTCGCGTGTCGATCCCTTCGGCCGGCCTGCTGGTCACCGGCTATGCGCTGGGCGTCGTCTTCG
GCGCGCCGATCGTCGCCATGGCCACCGCGCATCTGCCGCGCAAGCCGGTGCTGGTGGGGTTGGCCGCGTCGTTCGTCGTC
GGCAATCTGTTCTGCGCCATCGCGCCTGACTATTGGACACTGATGGCGGCGCGTGTCTTCACCGCTTTTGGCCACGGCGC
TTTCTTCGGCATCGGCTCGGTCGTTGCCGCGAGCCTCGTGCCGCGCAACAAACGCGCCAGCGCCATGGCGCTGATGTTTG
CCGGCCTGACGCTTTCCAACATTCTGGGCGTTCCCGCCGGCACAGCCCTTGGCGAAGCTTTCGGCTGGCGCTCCACATTC
ATCGCCGTGGTCGGCATCGGACTGATCTCGGTCGCTGCCATCGCCTGGCTGGTGCCGTCGGATGTCGCCGAACCCAGCGG
CGGCGGTCTGCGCGGCGAGTTGCGGGTGCTGGGCAGGCTGCAGGTCTGGCTGGCGATGCTGATCGCCTCGCTGGCCTCGG
CCAGCTTGTTTGCCGTTTTCACCTATATAAAACCCTACCTCACCGACGTGTCCGGCCTGTCGACCTCCGCGGTCACCTGG
GTGCTTTTGCTGTTCGGCGCCGGCATGACGATCGGCAACATCATTGGTGGGCGGCTGGCGGACTGGAAGCTGATGCCGAC
CGTCATCGGCACGCTGCTGTTGATGGCGGTGCTGTTCATCGGCTTCATGCAGTTCGGCGCGATAGCCAGTGTCGCCATCG
GCATCGTCTTCCTCTGGGGGCTGCTCATCTTCGTCGTCGTGCCGCCGCTGCAGATCCGCGTCGTCGAGGCGGCCTCGGAA
GGGCCGAACCTTGCCGCCACGCTGAACCAGGGCGCCTTCAATGTCGGCAATGCCAGCGGCGCCTGGATCGGCGGCGTGGC
CCTTTCAGCCGGCGTCTCCTACGCCCACCTGCCCCTGGTCGGCGCGGTGCTCGCCTTGCTGGCGGTCACCGTCGCGGTGC
TGTCGCAAGCGCTGGACCGGCGCGCGCCTGTCCCGCTCCAGGCTGCAGCCGAATAG

Upstream 100 bases:

>100_bases
CTCCCGACATTCTGCATTGGTGCATTGCAGCAATGTGCATTGCGCATAGCTCATTTCCTCGCGCAATCTCTGGATTGAAC
CGATTCAGTCTGGACGCTCC

Downstream 100 bases:

>100_bases
ACATCCATCCGCCGAAGGGACGGAAACCTTGCGCCCATAGCGCGGCAGGCTGGACCAATCGACAGCGATACCTCAAATGG
GCATGTCTTCTCGCTCTAAC

Product: putative transmembrane efflux protei

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MPLPILALAIASFCIGTTEFVIMGLLPEVAADLRVSIPSAGLLVTGYALGVVFGAPIVAMATAHLPRKPVLVGLAASFVV
GNLFCAIAPDYWTLMAARVFTAFGHGAFFGIGSVVAASLVPRNKRASAMALMFAGLTLSNILGVPAGTALGEAFGWRSTF
IAVVGIGLISVAAIAWLVPSDVAEPSGGGLRGELRVLGRLQVWLAMLIASLASASLFAVFTYIKPYLTDVSGLSTSAVTW
VLLLFGAGMTIGNIIGGRLADWKLMPTVIGTLLLMAVLFIGFMQFGAIASVAIGIVFLWGLLIFVVVPPLQIRVVEAASE
GPNLAATLNQGAFNVGNASGAWIGGVALSAGVSYAHLPLVGAVLALLAVTVAVLSQALDRRAPVPLQAAAE

Sequences:

>Translated_391_residues
MPLPILALAIASFCIGTTEFVIMGLLPEVAADLRVSIPSAGLLVTGYALGVVFGAPIVAMATAHLPRKPVLVGLAASFVV
GNLFCAIAPDYWTLMAARVFTAFGHGAFFGIGSVVAASLVPRNKRASAMALMFAGLTLSNILGVPAGTALGEAFGWRSTF
IAVVGIGLISVAAIAWLVPSDVAEPSGGGLRGELRVLGRLQVWLAMLIASLASASLFAVFTYIKPYLTDVSGLSTSAVTW
VLLLFGAGMTIGNIIGGRLADWKLMPTVIGTLLLMAVLFIGFMQFGAIASVAIGIVFLWGLLIFVVVPPLQIRVVEAASE
GPNLAATLNQGAFNVGNASGAWIGGVALSAGVSYAHLPLVGAVLALLAVTVAVLSQALDRRAPVPLQAAAE
>Mature_390_residues
PLPILALAIASFCIGTTEFVIMGLLPEVAADLRVSIPSAGLLVTGYALGVVFGAPIVAMATAHLPRKPVLVGLAASFVVG
NLFCAIAPDYWTLMAARVFTAFGHGAFFGIGSVVAASLVPRNKRASAMALMFAGLTLSNILGVPAGTALGEAFGWRSTFI
AVVGIGLISVAAIAWLVPSDVAEPSGGGLRGELRVLGRLQVWLAMLIASLASASLFAVFTYIKPYLTDVSGLSTSAVTWV
LLLFGAGMTIGNIIGGRLADWKLMPTVIGTLLLMAVLFIGFMQFGAIASVAIGIVFLWGLLIFVVVPPLQIRVVEAASEG
PNLAATLNQGAFNVGNASGAWIGGVALSAGVSYAHLPLVGAVLALLAVTVAVLSQALDRRAPVPLQAAAE

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=387, Percent_Identity=47.0284237726098, Blast_Score=295, Evalue=3e-81,
Organism=Escherichia coli, GI1786595, Length=385, Percent_Identity=34.8051948051948, Blast_Score=219, Evalue=3e-58,
Organism=Escherichia coli, GI1787808, Length=390, Percent_Identity=26.6666666666667, Blast_Score=129, Evalue=4e-31,
Organism=Escherichia coli, GI145693198, Length=345, Percent_Identity=26.0869565217391, Blast_Score=105, Evalue=7e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40018; Mature: 39887

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPILALAIASFCIGTTEFVIMGLLPEVAADLRVSIPSAGLLVTGYALGVVFGAPIVAM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHH
ATAHLPRKPVLVGLAASFVVGNLFCAIAPDYWTLMAARVFTAFGHGAFFGIGSVVAASLV
HHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
PRNKRASAMALMFAGLTLSNILGVPAGTALGEAFGWRSTFIAVVGIGLISVAAIAWLVPS
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
DVAEPSGGGLRGELRVLGRLQVWLAMLIASLASASLFAVFTYIKPYLTDVSGLSTSAVTW
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VLLLFGAGMTIGNIIGGRLADWKLMPTVIGTLLLMAVLFIGFMQFGAIASVAIGIVFLWG
HHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLIFVVVPPLQIRVVEAASEGPNLAATLNQGAFNVGNASGAWIGGVALSAGVSYAHLPLV
HHHHHHCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHH
GAVLALLAVTVAVLSQALDRRAPVPLQAAAE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PLPILALAIASFCIGTTEFVIMGLLPEVAADLRVSIPSAGLLVTGYALGVVFGAPIVAM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHH
ATAHLPRKPVLVGLAASFVVGNLFCAIAPDYWTLMAARVFTAFGHGAFFGIGSVVAASLV
HHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
PRNKRASAMALMFAGLTLSNILGVPAGTALGEAFGWRSTFIAVVGIGLISVAAIAWLVPS
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
DVAEPSGGGLRGELRVLGRLQVWLAMLIASLASASLFAVFTYIKPYLTDVSGLSTSAVTW
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VLLLFGAGMTIGNIIGGRLADWKLMPTVIGTLLLMAVLFIGFMQFGAIASVAIGIVFLWG
HHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLIFVVVPPLQIRVVEAASEGPNLAATLNQGAFNVGNASGAWIGGVALSAGVSYAHLPLV
HHHHHHCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHH
GAVLALLAVTVAVLSQALDRRAPVPLQAAAE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]