| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472455
Identifier: 13472455
GI number: 13472455
Start: 2212239
End: 2213030
Strand: Direct
Name: 13472455
Synonym: mlr2757
Alternate gene names: NA
Gene position: 2212239-2213030 (Clockwise)
Preceding gene: 13472454
Following gene: 13472456
Centisome position: 31.44
GC content: 61.99
Gene sequence:
>792_bases ATGACGCCTGCAGGCACGGTTTTCGCCAAGAAGCGGCAGCTCGACGCCCTCAGGAAGAGAGGCCGCCCAGGCGCCCTGGA CGGCCTGGAGCACAGTCAGCGGATCGACATCACCTATACGTCGAACGCGATCGAGGGCAACACGCTGACAGCGGGCGAGA CCGCCCTGGTCCTGGAGAAAGGCATCACGATCAGCGGCAAGCCGCTCAAGGATCATCTCGAGGCCGTCGACCACGCAAGG GCGTTGAACTGGGTGCTGGAAATCGCGTCCCAAAGCAGTACGCCAATCGTCGAAGCGGACATCCGCAACCTGCACCATCT GGTTGTGGCAAATACCAAACCCGAAATCGCTGGCCGCTACGCCGACAGCGCGCGCTACGTGAATACGGATGCCGGCGTCT ATGATTTCCCACCCCCTATGGACGTTCCTGCACTGATGGAGAGGTTTTGCCAATGGCTGGGCACGGCACGAAATACGCCG CAAACCGCCTTTGAGGCGCATCGGCGATTGGTCGATATTCATCCCTTCAACGACGGCAATGGCCGCACGGCGCGCCTTTT GATGAATCTGGTGCTGGCACGCGCGGGCTACCCGCCCGTGGCGATACGCCCGGAAGATCGCCCAGCCTATATCGCCGCGC TTGAAACGGCCCAGCGTGGCGGCGGTCACGCAGCGTTTGACCGGTTACTTTTCGACCGGCTGGATCAGACGCTGGATATG TATCTCGACGCCGCGCGCCAGGCGCAGGCTTCTTCCGCCGAAGCCGGCAAGGTAATCCCGATAAGGAGCTGA
Upstream 100 bases:
>100_bases CGGCTACAAGGTCCACATCCTGTCGAATGGGCAGGTGATCAGCGATGTGTGAGAACTCCGATCACATCGGACAGTTTCAC GCCCGACCGAGGCGCGAACA
Downstream 100 bases:
>100_bases GCATGGACACCGGCCTGACCACCATCCCGGAAGCGGCGATCGAGAAGCACCGCGCCACCGCGCAGAGCTTCATCACCCGC ATCGTCGTGCTGGAGGACCC
Product: hypothetical protein
Products: NA
Alternate protein names: Fic Family Protein; Fic Protein; FIC Domain-Containing Protein; Filamentation Induced By CAMP Protein Fic-Like Protein; Filamentation Induced By Camp Family Protein; -Like Protein; Fic Family Protein xin-Antitoxin System; Helix-Turn-Helix Domain-Containing Protein; Filamentation Induced By CAMP Family Protein; Fic-Domain-Containing Protein; Fic Protein Involved In; Filamentation Induced By Camp Protein Fic; Fic Family xin-Antitoxin System Toxin Component; Fic/DOC Family Protein
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MTPAGTVFAKKRQLDALRKRGRPGALDGLEHSQRIDITYTSNAIEGNTLTAGETALVLEKGITISGKPLKDHLEAVDHAR ALNWVLEIASQSSTPIVEADIRNLHHLVVANTKPEIAGRYADSARYVNTDAGVYDFPPPMDVPALMERFCQWLGTARNTP QTAFEAHRRLVDIHPFNDGNGRTARLLMNLVLARAGYPPVAIRPEDRPAYIAALETAQRGGGHAAFDRLLFDRLDQTLDM YLDAARQAQASSAEAGKVIPIRS
Sequences:
>Translated_263_residues MTPAGTVFAKKRQLDALRKRGRPGALDGLEHSQRIDITYTSNAIEGNTLTAGETALVLEKGITISGKPLKDHLEAVDHAR ALNWVLEIASQSSTPIVEADIRNLHHLVVANTKPEIAGRYADSARYVNTDAGVYDFPPPMDVPALMERFCQWLGTARNTP QTAFEAHRRLVDIHPFNDGNGRTARLLMNLVLARAGYPPVAIRPEDRPAYIAALETAQRGGGHAAFDRLLFDRLDQTLDM YLDAARQAQASSAEAGKVIPIRS >Mature_262_residues TPAGTVFAKKRQLDALRKRGRPGALDGLEHSQRIDITYTSNAIEGNTLTAGETALVLEKGITISGKPLKDHLEAVDHARA LNWVLEIASQSSTPIVEADIRNLHHLVVANTKPEIAGRYADSARYVNTDAGVYDFPPPMDVPALMERFCQWLGTARNTPQ TAFEAHRRLVDIHPFNDGNGRTARLLMNLVLARAGYPPVAIRPEDRPAYIAALETAQRGGGHAAFDRLLFDRLDQTLDMY LDAARQAQASSAEAGKVIPIRS
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI42794620, Length=221, Percent_Identity=37.10407239819, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17544594, Length=224, Percent_Identity=33.4821428571429, Blast_Score=115, Evalue=2e-26, Organism=Drosophila melanogaster, GI24582217, Length=240, Percent_Identity=35.8333333333333, Blast_Score=124, Evalue=7e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28796; Mature: 28665
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPAGTVFAKKRQLDALRKRGRPGALDGLEHSQRIDITYTSNAIEGNTLTAGETALVLEK CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCEECCCCEEEEEEC GITISGKPLKDHLEAVDHARALNWVLEIASQSSTPIVEADIRNLHHLVVANTKPEIAGRY CCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHEEEEEECCCCHHHCCC ADSARYVNTDAGVYDFPPPMDVPALMERFCQWLGTARNTPQTAFEAHRRLVDIHPFNDGN CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEECCCCCC GRTARLLMNLVLARAGYPPVAIRPEDRPAYIAALETAQRGGGHAAFDRLLFDRLDQTLDM CHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHEEHHHHCCCCHHHHHHHHHHHHHHHHHH YLDAARQAQASSAEAGKVIPIRS HHHHHHHHHCCCCCCCCEEECCC >Mature Secondary Structure TPAGTVFAKKRQLDALRKRGRPGALDGLEHSQRIDITYTSNAIEGNTLTAGETALVLEK CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCEECCCCEEEEEEC GITISGKPLKDHLEAVDHARALNWVLEIASQSSTPIVEADIRNLHHLVVANTKPEIAGRY CCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHEEEEEECCCCHHHCCC ADSARYVNTDAGVYDFPPPMDVPALMERFCQWLGTARNTPQTAFEAHRRLVDIHPFNDGN CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEECCCCCC GRTARLLMNLVLARAGYPPVAIRPEDRPAYIAALETAQRGGGHAAFDRLLFDRLDQTLDM CHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHEEHHHHCCCCHHHHHHHHHHHHHHHHHH YLDAARQAQASSAEAGKVIPIRS HHHHHHHHHCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA