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The map label for this gene is nudL [H]

Identifier: 13472435

GI number: 13472435

Start: 2190887

End: 2191501

Strand: Reverse

Name: nudL [H]

Synonym: mll2727

Alternate gene names: 13472435

Gene position: 2191501-2190887 (Counterclockwise)

Preceding gene: 13472436

Following gene: 13472434

Centisome position: 31.15

GC content: 64.55

Gene sequence:

>615_bases
ATGCCGTTTTCATCGGCGGATTTTCGCGCGCGCTTCGCCGCGCAGCCGGATGCGCATGCCGGCGACGACTATGGCGACCA
CCGCTTCAATCCGGGTCATCCGCGGCTGAACCAGGGCAAGCCGCTGCGCAATGCGGCGGTGCTGATCCCGGTGATCGATC
ACGAAGGCGAGGCGACGGTTCTCTTGACCAAGCGAGCCGAAAAGCTGCGCAACCATTCGGGGCAGGTGGCCTTTCCCGGC
GGCACCATCGATGCGACCGATGCCAGCCCGGAGGCGGCGGCGCTGCGCGAAACCTTCGAGGAGATCGGCCTCGATCAGCA
CCGCATCGAGATCATCGGCCGCATGCCCGATTACGTCGCCGGCAGCGGCTATCGCATCGCGCCGGTGCTGGGCATCGTGA
GGCCCGGCTTCCAGCTCGACTTGAATGCCGACGAGGTCGATGCCGCCTTCGAAGTGCCGTTGCGCTTCCTGATGGACCCG
GTGAATCACAAGCGCGACAGCCGCATGTGGAACGATCTCGAATGGTTCTTCTACGACATGCCCTATGGCGACCGGCGCAT
CTGGGGCGTCACCGCCGGCATCATCCGCACGCTCTATGAAAGGCTCTATGCGTGA

Upstream 100 bases:

>100_bases
GCGAGGCGATGTTTGCCGTGCGCTCGAAGGGCGCCGTGTTTCCGATCATGCCGGCGGACCAGCTGAAGCGGCTGAGCGCA
TGATGGATCGCGTGTCACTG

Downstream 100 bases:

>100_bases
GTGTTTCGATCTCGGGCAGGGCCAACTGGCTAGCCGACAAGCATTTGCAGCGCCTGCTTGCCGCCCTGGCTGAAGGCAGC
GAGGAGGCGCGTATCGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MPFSSADFRARFAAQPDAHAGDDYGDHRFNPGHPRLNQGKPLRNAAVLIPVIDHEGEATVLLTKRAEKLRNHSGQVAFPG
GTIDATDASPEAAALRETFEEIGLDQHRIEIIGRMPDYVAGSGYRIAPVLGIVRPGFQLDLNADEVDAAFEVPLRFLMDP
VNHKRDSRMWNDLEWFFYDMPYGDRRIWGVTAGIIRTLYERLYA

Sequences:

>Translated_204_residues
MPFSSADFRARFAAQPDAHAGDDYGDHRFNPGHPRLNQGKPLRNAAVLIPVIDHEGEATVLLTKRAEKLRNHSGQVAFPG
GTIDATDASPEAAALRETFEEIGLDQHRIEIIGRMPDYVAGSGYRIAPVLGIVRPGFQLDLNADEVDAAFEVPLRFLMDP
VNHKRDSRMWNDLEWFFYDMPYGDRRIWGVTAGIIRTLYERLYA
>Mature_203_residues
PFSSADFRARFAAQPDAHAGDDYGDHRFNPGHPRLNQGKPLRNAAVLIPVIDHEGEATVLLTKRAEKLRNHSGQVAFPGG
TIDATDASPEAAALRETFEEIGLDQHRIEIIGRMPDYVAGSGYRIAPVLGIVRPGFQLDLNADEVDAAFEVPLRFLMDPV
NHKRDSRMWNDLEWFFYDMPYGDRRIWGVTAGIIRTLYERLYA

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=123, Percent_Identity=38.2113821138211, Blast_Score=91, Evalue=9e-19,
Organism=Escherichia coli, GI1788115, Length=180, Percent_Identity=41.6666666666667, Blast_Score=99, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17536993, Length=167, Percent_Identity=32.9341317365269, Blast_Score=87, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17510677, Length=170, Percent_Identity=30, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI18859683, Length=174, Percent_Identity=39.6551724137931, Blast_Score=92, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 22948; Mature: 22817

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: PS01293 UPF0035

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFSSADFRARFAAQPDAHAGDDYGDHRFNPGHPRLNQGKPLRNAAVLIPVIDHEGEATV
CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEE
LLTKRAEKLRNHSGQVAFPGGTIDATDASPEAAALRETFEEIGLDQHRIEIIGRMPDYVA
EEEHHHHHHHCCCCCEEECCCCEECCCCCCHHHHHHHHHHHHCCCHHHHHEECCCCCHHC
GSGYRIAPVLGIVRPGFQLDLNADEVDAAFEVPLRFLMDPVNHKRDSRMWNDLEWFFYDM
CCCEEHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCHHCCCHHHHHHCCCEEEEEEC
PYGDRRIWGVTAGIIRTLYERLYA
CCCCCEEEHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PFSSADFRARFAAQPDAHAGDDYGDHRFNPGHPRLNQGKPLRNAAVLIPVIDHEGEATV
CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEE
LLTKRAEKLRNHSGQVAFPGGTIDATDASPEAAALRETFEEIGLDQHRIEIIGRMPDYVA
EEEHHHHHHHCCCCCEEECCCCEECCCCCCHHHHHHHHHHHHCCCHHHHHEECCCCCHHC
GSGYRIAPVLGIVRPGFQLDLNADEVDAAFEVPLRFLMDPVNHKRDSRMWNDLEWFFYDM
CCCEEHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCHHCCCHHHHHHCCCEEEEEEC
PYGDRRIWGVTAGIIRTLYERLYA
CCCCCEEEHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA