| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472426
Identifier: 13472426
GI number: 13472426
Start: 2184018
End: 2184575
Strand: Reverse
Name: 13472426
Synonym: mll2717
Alternate gene names: NA
Gene position: 2184575-2184018 (Counterclockwise)
Preceding gene: 13472429
Following gene: 13472425
Centisome position: 31.05
GC content: 63.62
Gene sequence:
>558_bases ATGTTTTTCAAAAAGTCAAAAGGGCTGAACGCCCCAGCTGAACATGTCCAGACCGATGCCGAGCGTCGGTTGCGGACCGA GGCAATCCGCGCCTCCGGCCGAATGCCGGCGGACGATGTTGCTTGGCCTTTTCATCTCTATTTTCACACGGAGGACGAAC CGATGTTCGATCCCTACAGAATACCGGGCTCGAGGAGCCTGCATATTCACCGACTGCCGACGTGGGCGCTGTTGATCGGC GAGACCTATTCGTCGGCGGTCCATGCCGAAGTCCGGCGCCGGCCGCATCGCGGCATGCTGCCGGATGTCGATTTCTCGCA CGCTGTCCCGGACCCGAGCCGGCCTTCGCTGGTGCGCCGGATCATCCGGCTGATCCGACCGGGTGCGAAAATCCGGCTAG TCGACACCGCGCCGTCAGGATCGGCAAGCGAGCCTGTCGGCGAAAAGCCCGCGAACCCCTATATTGCGCGAAGCAGGGCC GACGGTCCGGACGATTCCGGACCGTCGGCCCTCGGCGCCACACGGTCCGGGGACTTCGTACGTTCACGCGCCGCGTAA
Upstream 100 bases:
>100_bases CCTGCCGGCGGCTTCGGTACGACGATTCTCCTGACTCTCTAAGACTTGATCGCACCGATTCCCGCCGAAACGATTTTTCG GCTCTCGAAGGAATCCTGCG
Downstream 100 bases:
>100_bases GCGGAAAACAGATTTTCACAGGCATGACCTATGTTGTTGTTCAGCTGGTTTGAAAGAAGGCTCGATCCGTTCCCCGCGGC GGAACCGGTCGAGCCGCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MFFKKSKGLNAPAEHVQTDAERRLRTEAIRASGRMPADDVAWPFHLYFHTEDEPMFDPYRIPGSRSLHIHRLPTWALLIG ETYSSAVHAEVRRRPHRGMLPDVDFSHAVPDPSRPSLVRRIIRLIRPGAKIRLVDTAPSGSASEPVGEKPANPYIARSRA DGPDDSGPSALGATRSGDFVRSRAA
Sequences:
>Translated_185_residues MFFKKSKGLNAPAEHVQTDAERRLRTEAIRASGRMPADDVAWPFHLYFHTEDEPMFDPYRIPGSRSLHIHRLPTWALLIG ETYSSAVHAEVRRRPHRGMLPDVDFSHAVPDPSRPSLVRRIIRLIRPGAKIRLVDTAPSGSASEPVGEKPANPYIARSRA DGPDDSGPSALGATRSGDFVRSRAA >Mature_185_residues MFFKKSKGLNAPAEHVQTDAERRLRTEAIRASGRMPADDVAWPFHLYFHTEDEPMFDPYRIPGSRSLHIHRLPTWALLIG ETYSSAVHAEVRRRPHRGMLPDVDFSHAVPDPSRPSLVRRIIRLIRPGAKIRLVDTAPSGSASEPVGEKPANPYIARSRA DGPDDSGPSALGATRSGDFVRSRAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20521; Mature: 20521
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFKKSKGLNAPAEHVQTDAERRLRTEAIRASGRMPADDVAWPFHLYFHTEDEPMFDPYR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCEE IPGSRSLHIHRLPTWALLIGETYSSAVHAEVRRRPHRGMLPDVDFSHAVPDPSRPSLVRR CCCCCCEEEEECCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH IIRLIRPGAKIRLVDTAPSGSASEPVGEKPANPYIARSRADGPDDSGPSALGATRSGDFV HHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHH RSRAA HCCCC >Mature Secondary Structure MFFKKSKGLNAPAEHVQTDAERRLRTEAIRASGRMPADDVAWPFHLYFHTEDEPMFDPYR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCEE IPGSRSLHIHRLPTWALLIGETYSSAVHAEVRRRPHRGMLPDVDFSHAVPDPSRPSLVRR CCCCCCEEEEECCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH IIRLIRPGAKIRLVDTAPSGSASEPVGEKPANPYIARSRADGPDDSGPSALGATRSGDFV HHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHH RSRAA HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA