Click here to switch to the map view.

The map label for this gene is 13472396

Identifier: 13472396

GI number: 13472396

Start: 2155632

End: 2156720

Strand: Direct

Name: 13472396

Synonym: mlr2680

Alternate gene names: NA

Gene position: 2155632-2156720 (Clockwise)

Preceding gene: 13472395

Following gene: 13472397

Centisome position: 30.64

GC content: 66.85

Gene sequence:

>1089_bases
ATGACGCGGCTGAAGACCCGAATCGTCGATCTGATCGATGCGCTGGGCCCCCTTCCCGTCAACGAATACATGGCGATGTG
CCTGTTCGACCCCGCGGACGGCTACTACACGACACGCGAGCCCTTCGGCGCCGCCGGCGACTTCGTCACCGCGCCAGAGA
TCAGCCAGATGTTCGGCGAACTCGTCGCGGTCTGGCTCTACCAGGCCTGGGCTGCGATTGCCCGGCCGATGCCAGTCACC
ATCGCCGAGATCGGTCCGGGCCGCGGCACGCTGATGAAGGACATGCTGCGCACCCTGTCGCGGCTCGACCCGGCCCTGGC
CAATGGCGCCGTCTTCGCCATGATCGAGACCAGTCCGCGCCTGGCCGAAATCCAGAAGCAGACGCTGGGCGCGACACCTT
TCGCAGTTCGTTGGCACGAAACCATCGAGACACTGCCCGATCAGCCGCTTCTCATCGTCGGCAACGAATTGTTCGACGCC
GTGCCGATCCGCCAGTTCGTCCGCACGGCCACCGGTTGGCGCGAGCGCATGGTCAGCCTCGACGACAAGGACGAGTTGCG
CTTCTTCGCCGGCGCCGGCTCGATCGACCCAACCCTATTGCCACTCGACGCCGCTGAAGCGCCGCAGGGCGCGATCGTCG
AAGTGGCACCGGCTCGCGCCGCCCTGATGGCCGCCATTGCCGGGCGCATGGCCCGAAACGGCGGCGCCGGCCTGTTTCTC
GACTATGGTCATCTGCAGCCAGGTGTCGGCGACACGCTACAGGCCTTGCGCCGACACAATCACGAAGATGTGCTGGCCAA
TCCCGGCGAAGCCGATCTCACCTCGCATGTCGATTTCGCCGCCCTTGCCGCCACCGTGCGCGCGCATGGCCTCGACGTCC
ATCTGTCGACGCAAGGCAGTTTCCTGCTCGGCATGGGCATTCTCGAGCGTGCCGGCCGGCTTGGCGCCGATGGCGACCAG
GCGGCCCGCGACAAGATCACCGGCGAGGTCGAGCGTCTTGCTGGCCCGCAGGCCATGGGAGAACTGTTCAAGGTGCTTGC
CGTCCTGCCGCGCGGCGTGCCGATCCGGCCCTTCGCGACGGCGGATTGA

Upstream 100 bases:

>100_bases
GGCTGACCATGGGCATGATCCTGTCGACGCCGATGGTGCTGGCCGGCATCTGGGCGATGGCGACGGCCAAGCCGGTGAAG
CAAGCGCAGCCGCAGGCGAC

Downstream 100 bases:

>100_bases
CTTTTCACCGCTGCCCCTCCCAATCTCCCGTCCGGTAGAAGAGCGGGCGAACCGCCGGCCGCCTCGCTTCCGGACTTTTT
CTTGACGAAACCGCCCACAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 362; Mature: 361

Protein sequence:

>362_residues
MTRLKTRIVDLIDALGPLPVNEYMAMCLFDPADGYYTTREPFGAAGDFVTAPEISQMFGELVAVWLYQAWAAIARPMPVT
IAEIGPGRGTLMKDMLRTLSRLDPALANGAVFAMIETSPRLAEIQKQTLGATPFAVRWHETIETLPDQPLLIVGNELFDA
VPIRQFVRTATGWRERMVSLDDKDELRFFAGAGSIDPTLLPLDAAEAPQGAIVEVAPARAALMAAIAGRMARNGGAGLFL
DYGHLQPGVGDTLQALRRHNHEDVLANPGEADLTSHVDFAALAATVRAHGLDVHLSTQGSFLLGMGILERAGRLGADGDQ
AARDKITGEVERLAGPQAMGELFKVLAVLPRGVPIRPFATAD

Sequences:

>Translated_362_residues
MTRLKTRIVDLIDALGPLPVNEYMAMCLFDPADGYYTTREPFGAAGDFVTAPEISQMFGELVAVWLYQAWAAIARPMPVT
IAEIGPGRGTLMKDMLRTLSRLDPALANGAVFAMIETSPRLAEIQKQTLGATPFAVRWHETIETLPDQPLLIVGNELFDA
VPIRQFVRTATGWRERMVSLDDKDELRFFAGAGSIDPTLLPLDAAEAPQGAIVEVAPARAALMAAIAGRMARNGGAGLFL
DYGHLQPGVGDTLQALRRHNHEDVLANPGEADLTSHVDFAALAATVRAHGLDVHLSTQGSFLLGMGILERAGRLGADGDQ
AARDKITGEVERLAGPQAMGELFKVLAVLPRGVPIRPFATAD
>Mature_361_residues
TRLKTRIVDLIDALGPLPVNEYMAMCLFDPADGYYTTREPFGAAGDFVTAPEISQMFGELVAVWLYQAWAAIARPMPVTI
AEIGPGRGTLMKDMLRTLSRLDPALANGAVFAMIETSPRLAEIQKQTLGATPFAVRWHETIETLPDQPLLIVGNELFDAV
PIRQFVRTATGWRERMVSLDDKDELRFFAGAGSIDPTLLPLDAAEAPQGAIVEVAPARAALMAAIAGRMARNGGAGLFLD
YGHLQPGVGDTLQALRRHNHEDVLANPGEADLTSHVDFAALAATVRAHGLDVHLSTQGSFLLGMGILERAGRLGADGDQA
ARDKITGEVERLAGPQAMGELFKVLAVLPRGVPIRPFATAD

Specific function: Unknown

COG id: COG1565

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI21396487, Length=366, Percent_Identity=33.879781420765, Blast_Score=199, Evalue=2e-51,
Organism=Homo sapiens, GI145701028, Length=345, Percent_Identity=26.9565217391304, Blast_Score=105, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI193211224, Length=375, Percent_Identity=31.4666666666667, Blast_Score=191, Evalue=7e-49,
Organism=Drosophila melanogaster, GI24645885, Length=368, Percent_Identity=32.6086956521739, Blast_Score=185, Evalue=3e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38867; Mature: 38736

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLKTRIVDLIDALGPLPVNEYMAMCLFDPADGYYTTREPFGAAGDFVTAPEISQMFGE
CCHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCEECCCCCCCCCCCCCCHHHHHHHHH
LVAVWLYQAWAAIARPMPVTIAEIGPGRGTLMKDMLRTLSRLDPALANGAVFAMIETSPR
HHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCHHHHCCEEEEEEECCCH
LAEIQKQTLGATPFAVRWHETIETLPDQPLLIVGNELFDAVPIRQFVRTATGWRERMVSL
HHHHHHHHCCCCCEEEEHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCC
DDKDELRFFAGAGSIDPTLLPLDAAEAPQGAIVEVAPARAALMAAIAGRMARNGGAGLFL
CCHHHEEEEECCCCCCCCEEECCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCEEEE
DYGHLQPGVGDTLQALRRHNHEDVLANPGEADLTSHVDFAALAATVRAHGLDVHLSTQGS
ECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCC
FLLGMGILERAGRLGADGDQAARDKITGEVERLAGPQAMGELFKVLAVLPRGVPIRPFAT
CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCC
AD
CC
>Mature Secondary Structure 
TRLKTRIVDLIDALGPLPVNEYMAMCLFDPADGYYTTREPFGAAGDFVTAPEISQMFGE
CHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCEECCCCCCCCCCCCCCHHHHHHHHH
LVAVWLYQAWAAIARPMPVTIAEIGPGRGTLMKDMLRTLSRLDPALANGAVFAMIETSPR
HHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCHHHHCCEEEEEEECCCH
LAEIQKQTLGATPFAVRWHETIETLPDQPLLIVGNELFDAVPIRQFVRTATGWRERMVSL
HHHHHHHHCCCCCEEEEHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCC
DDKDELRFFAGAGSIDPTLLPLDAAEAPQGAIVEVAPARAALMAAIAGRMARNGGAGLFL
CCHHHEEEEECCCCCCCCEEECCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCEEEE
DYGHLQPGVGDTLQALRRHNHEDVLANPGEADLTSHVDFAALAATVRAHGLDVHLSTQGS
ECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCC
FLLGMGILERAGRLGADGDQAARDKITGEVERLAGPQAMGELFKVLAVLPRGVPIRPFAT
CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCC
AD
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA