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The map label for this gene is ycbL [H]

Identifier: 13472383

GI number: 13472383

Start: 2144903

End: 2145541

Strand: Reverse

Name: ycbL [H]

Synonym: mll2661

Alternate gene names: 13472383

Gene position: 2145541-2144903 (Counterclockwise)

Preceding gene: 13472384

Following gene: 13472381

Centisome position: 30.49

GC content: 63.85

Gene sequence:

>639_bases
ATGGGTCAGCTCAATGCCGGCATCGTGCCGGTCACACCGTTTCAGCAGAACTGCACCATCCTGTTCGACATGGACGACAA
GCACGGCGTCGTCGTCGATCCGGGCGGCGACATCGACAAGGTGCTGGCGGTGCTGAAGGACAATGCGATCACGGCCGAGG
CGATCTGGATCACGCACGGCCACATCGACCATGCCGGCGGTGCCATGGAGCTGAAGGAAGCGCTCTGCCTCGACATCATC
GGCCCGCATGCAGCCGACAAGCCTTTGCTCGACAATCTTGAGAAACAGGGCAGGCTCTACAGTATTGCCGGCGCGCGCAA
CTGCGTGCCCGACCGGTTCCTGACCGAAGGTGAGACCGTGTCGTTCGGCGGCCACGTATTCGAGGTGCTGCATTGCCCCG
GCCATGCGCCCGGCCACGTCGTCTATTACAACCGCGCGGCCAAGTTCGCCCATGTCGGCGATGTGCTGTTTCGTGGCTCG
GTCGGCCGCACCGACCTGCCCGGCGGTGACCACGCAACGCTGATCGCCTCGATCAAGGACAAGCTCTTGCCGCTCGGCGA
CGATATCGGCTTCATCTGCGGCCACGGCCCTGGCGGCCGTTTTGGCGAGGAGCGGCGGACCAATCCGTTCCTGGTCTAA

Upstream 100 bases:

>100_bases
GCCCATTTCTGTTTGTGCAACGACTGACTGTTCGTCTTTCGAGGGTGGACGCCCTTCATTCGCGCCTCTACATCACCGCG
TGAACATCGAAAGGACGATC

Downstream 100 bases:

>100_bases
GATCAGCGCCTCCACTCGAGGTCGTAGAGTCAAAACAAAAGAGCGCTGGCCTTGGGGTCAGCGCTTTTTTGTTTGGGGCA
GGGAAGCCTCAGTTTGCCGT

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MGQLNAGIVPVTPFQQNCTILFDMDDKHGVVVDPGGDIDKVLAVLKDNAITAEAIWITHGHIDHAGGAMELKEALCLDII
GPHAADKPLLDNLEKQGRLYSIAGARNCVPDRFLTEGETVSFGGHVFEVLHCPGHAPGHVVYYNRAAKFAHVGDVLFRGS
VGRTDLPGGDHATLIASIKDKLLPLGDDIGFICGHGPGGRFGEERRTNPFLV

Sequences:

>Translated_212_residues
MGQLNAGIVPVTPFQQNCTILFDMDDKHGVVVDPGGDIDKVLAVLKDNAITAEAIWITHGHIDHAGGAMELKEALCLDII
GPHAADKPLLDNLEKQGRLYSIAGARNCVPDRFLTEGETVSFGGHVFEVLHCPGHAPGHVVYYNRAAKFAHVGDVLFRGS
VGRTDLPGGDHATLIASIKDKLLPLGDDIGFICGHGPGGRFGEERRTNPFLV
>Mature_211_residues
GQLNAGIVPVTPFQQNCTILFDMDDKHGVVVDPGGDIDKVLAVLKDNAITAEAIWITHGHIDHAGGAMELKEALCLDIIG
PHAADKPLLDNLEKQGRLYSIAGARNCVPDRFLTEGETVSFGGHVFEVLHCPGHAPGHVVYYNRAAKFAHVGDVLFRGSV
GRTDLPGGDHATLIASIKDKLLPLGDDIGFICGHGPGGRFGEERRTNPFLV

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]

Homologues:

Organism=Escherichia coli, GI1787158, Length=208, Percent_Identity=47.5961538461538, Blast_Score=208, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI17538952, Length=189, Percent_Identity=28.042328042328, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI221330176, Length=199, Percent_Identity=27.6381909547739, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 22658; Mature: 22527

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQLNAGIVPVTPFQQNCTILFDMDDKHGVVVDPGGDIDKVLAVLKDNAITAEAIWITHG
CCCCCCCEEECCCCCCCCEEEEEECCCCCEEECCCCCHHHHHHHHHCCCEEEEEEEEEEC
HIDHAGGAMELKEALCLDIIGPHAADKPLLDNLEKQGRLYSIAGARNCVPDRFLTEGETV
CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCHHCCCCEE
SFGGHVFEVLHCPGHAPGHVVYYNRAAKFAHVGDVLFRGSVGRTDLPGGDHATLIASIKD
EECCEEEEEEECCCCCCCEEEEECCCCCHHHHHHHEEECCCCCCCCCCCCCEEEEEEHHH
KLLPLGDDIGFICGHGPGGRFGEERRTNPFLV
HCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GQLNAGIVPVTPFQQNCTILFDMDDKHGVVVDPGGDIDKVLAVLKDNAITAEAIWITHG
CCCCCCEEECCCCCCCCEEEEEECCCCCEEECCCCCHHHHHHHHHCCCEEEEEEEEEEC
HIDHAGGAMELKEALCLDIIGPHAADKPLLDNLEKQGRLYSIAGARNCVPDRFLTEGETV
CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCHHCCCCEE
SFGGHVFEVLHCPGHAPGHVVYYNRAAKFAHVGDVLFRGSVGRTDLPGGDHATLIASIKD
EECCEEEEEEECCCCCCCEEEEECCCCCHHHHHHHEEECCCCCCCCCCCCCEEEEEEHHH
KLLPLGDDIGFICGHGPGGRFGEERRTNPFLV
HCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]