Click here to switch to the map view.

The map label for this gene is ybaA [H]

Identifier: 13472370

GI number: 13472370

Start: 2137635

End: 2138006

Strand: Direct

Name: ybaA [H]

Synonym: mlr2642

Alternate gene names: 13472370

Gene position: 2137635-2138006 (Clockwise)

Preceding gene: 13472369

Following gene: 13472371

Centisome position: 30.38

GC content: 59.41

Gene sequence:

>372_bases
ATGTCCTATGTCGACGGTTTCGTGCTTGCCGTGCCAAAGGCCAAACTCGATGACTACAAGAAGCTGGCCAACCTCGCAGG
CCCCATATGGATGGAACACGGCGCGCTGGCTTATGTCGAATGCATCGGCGATGACGTGCCCTATGGCGAGCTGACCTCGT
TTCCGCGTGCCGTTCAGGCAAAGGACGACGAGATCGTCGTCTTCGCCTGGGCGGTCTATGAATCCAGGCAAAGCCGCGAC
GCGGTGATGGCCAAGGTGATGGCCGATCCGCGTTTGACACCCGATTTGGGACCCATGCCCTTCGATATGAAGCGCATGAT
CTTCGGCGGCTTCCAGCCTTTCATCGAGCTGCAGTCGCCCGCTGCCGCGTAA

Upstream 100 bases:

>100_bases
GAAGTAGCGAGCAGGCGTCCCCCATCAGGGCTGACGCGCTCACAGCGCCGGGTCGTATCCCCGCCGACCCGGCGCCCGCT
TTTCAGCAAAGGAGTTCACC

Downstream 100 bases:

>100_bases
CGGCGCCAATGCGGGACCAGAAACTCTTCTTCATTTCTCAAGGCAGAACCGACTTATGCGCAAGCTGATCGTATTCAACA
GCATCTCGCTCGACGGCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MSYVDGFVLAVPKAKLDDYKKLANLAGPIWMEHGALAYVECIGDDVPYGELTSFPRAVQAKDDEIVVFAWAVYESRQSRD
AVMAKVMADPRLTPDLGPMPFDMKRMIFGGFQPFIELQSPAAA

Sequences:

>Translated_123_residues
MSYVDGFVLAVPKAKLDDYKKLANLAGPIWMEHGALAYVECIGDDVPYGELTSFPRAVQAKDDEIVVFAWAVYESRQSRD
AVMAKVMADPRLTPDLGPMPFDMKRMIFGGFQPFIELQSPAAA
>Mature_122_residues
SYVDGFVLAVPKAKLDDYKKLANLAGPIWMEHGALAYVECIGDDVPYGELTSFPRAVQAKDDEIVVFAWAVYESRQSRDA
VMAKVMADPRLTPDLGPMPFDMKRMIFGGFQPFIELQSPAAA

Specific function: Unknown

COG id: COG5507

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786661, Length=116, Percent_Identity=50.8620689655172, Blast_Score=118, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009874 [H]

Pfam domain/function: PF07237 DUF1428 [H]

EC number: NA

Molecular weight: Translated: 13618; Mature: 13487

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYVDGFVLAVPKAKLDDYKKLANLAGPIWMEHGALAYVECIGDDVPYGELTSFPRAVQA
CCCCCCEEEECCCCCHHHHHHHHHHCCCCEECCCCEEEEEECCCCCCCCCHHCCCCCCCC
KDDEIVVFAWAVYESRQSRDAVMAKVMADPRLTPDLGPMPFDMKRMIFGGFQPFIELQSP
CCCCEEEEEEEEHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCEECCCC
AAA
CCC
>Mature Secondary Structure 
SYVDGFVLAVPKAKLDDYKKLANLAGPIWMEHGALAYVECIGDDVPYGELTSFPRAVQA
CCCCCEEEECCCCCHHHHHHHHHHCCCCEECCCCEEEEEECCCCCCCCCHHCCCCCCCC
KDDEIVVFAWAVYESRQSRDAVMAKVMADPRLTPDLGPMPFDMKRMIFGGFQPFIELQSP
CCCCEEEEEEEEHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCEECCCC
AAA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]