| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is phnB [C]
Identifier: 13472369
GI number: 13472369
Start: 2137119
End: 2137541
Strand: Direct
Name: phnB [C]
Synonym: mlr2640
Alternate gene names: 13472369
Gene position: 2137119-2137541 (Clockwise)
Preceding gene: 13472367
Following gene: 13472370
Centisome position: 30.37
GC content: 62.41
Gene sequence:
>423_bases ATGACTGACCAGACCCCCATTCAGCCCAGGGCAGAAGTGCTCGGCGGATTGACCCCTTATCTGCAGGTGGACGGCGCCTT CAAGGCCGCCGATTTCTACAAGAAGGCCTTTGGCGCCGAGCAGGTGTTTGCATATCCGGCGGATGAAAAAGGCCGCACCA TGCACATCCATCTCCACATCAACGGCTCGACGCTGATGCTGGGCGACGCCTATCCCGAACACGGCCATCCGCACAAGGCT GCGCAAGGCTACACGCTGCAGCTCCATCTCGACGATGGCGACATCGACTTCTGGTGGCAGCGCGCCGTCGATGCCGGCTG TGAAGTGGTCACGCCGCTGCAGGTGATGTTCTGGGGCGACCGCTGGGGCCAGCTGAACGATCCGTTCGGCGTCGCCTGGG CGATGAACGCACCGGTGAAGTAG
Upstream 100 bases:
>100_bases ACTGGTTCGCCAAAAAAATTAACGCCGCCATGTAGGATTGCCGTCACCTCGTGCGTCCTGTGGTTCGCTAGGCCAAGCCC AATGCAAAGAGGAGCAAGAC
Downstream 100 bases:
>100_bases CGAGCAGGCGTCCCCCATCAGGGCTGACGCGCTCACAGCGCCGGGTCGTATCCCCGCCGACCCGGCGCCCGCTTTTCAGC AAAGGAGTTCACCATGTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MTDQTPIQPRAEVLGGLTPYLQVDGAFKAADFYKKAFGAEQVFAYPADEKGRTMHIHLHINGSTLMLGDAYPEHGHPHKA AQGYTLQLHLDDGDIDFWWQRAVDAGCEVVTPLQVMFWGDRWGQLNDPFGVAWAMNAPVK
Sequences:
>Translated_140_residues MTDQTPIQPRAEVLGGLTPYLQVDGAFKAADFYKKAFGAEQVFAYPADEKGRTMHIHLHINGSTLMLGDAYPEHGHPHKA AQGYTLQLHLDDGDIDFWWQRAVDAGCEVVTPLQVMFWGDRWGQLNDPFGVAWAMNAPVK >Mature_139_residues TDQTPIQPRAEVLGGLTPYLQVDGAFKAADFYKKAFGAEQVFAYPADEKGRTMHIHLHINGSTLMLGDAYPEHGHPHKAA QGYTLQLHLDDGDIDFWWQRAVDAGCEVVTPLQVMFWGDRWGQLNDPFGVAWAMNAPVK
Specific function: Unknown
COG id: COG2764
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: NA
Molecular weight: Translated: 15625; Mature: 15494
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDQTPIQPRAEVLGGLTPYLQVDGAFKAADFYKKAFGAEQVFAYPADEKGRTMHIHLHI CCCCCCCCCHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEE NGSTLMLGDAYPEHGHPHKAAQGYTLQLHLDDGDIDFWWQRAVDAGCEVVTPLQVMFWGD CCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCEECCEEEEEECC RWGQLNDPFGVAWAMNAPVK CCCCCCCCCEEEEEECCCCC >Mature Secondary Structure TDQTPIQPRAEVLGGLTPYLQVDGAFKAADFYKKAFGAEQVFAYPADEKGRTMHIHLHI CCCCCCCCHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEE NGSTLMLGDAYPEHGHPHKAAQGYTLQLHLDDGDIDFWWQRAVDAGCEVVTPLQVMFWGD CCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCEECCEEEEEECC RWGQLNDPFGVAWAMNAPVK CCCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]