| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472354
Identifier: 13472354
GI number: 13472354
Start: 2118400
End: 2119374
Strand: Reverse
Name: 13472354
Synonym: mll2621
Alternate gene names: NA
Gene position: 2119374-2118400 (Counterclockwise)
Preceding gene: 13472355
Following gene: 13472352
Centisome position: 30.12
GC content: 64.51
Gene sequence:
>975_bases GTGGCGGTGGAAGCAGCGGATTTCATGCCTGATGAGACTGTCATCGCCGGCATCCGGAAGAACATCGAGGCCTATGAGGC GGCGCGGGCCTCGGCGGTGCGGCAGGTCCGCTGGCGGGTGCCGCTGTTCGTCGGGCTGGTGCTGCTGGCCGTGGTGGTGA TTGCCTGGCTGTTCAACAAGGTCGCCGATCCCCACGAGCAATGGTTCTCGACGCCGCATGTATTCCTCTATGTCATCGGC TTCGCGGCATCGATCCTGCTCTATTTCCAGGCCATGAAGCCGGCGACGCGGCTGCAGCAATCGTTCCGCGACACGCTGCT GCCCATCATCTTCGGCTTCATCAGGGATGTGCGCTACCAGCATGGCGGCAGGCCGAACTCGTTCGACCGGCTGCCGCGCG AGGCGGTCGGGCCCTTCAATCGACAAACGTTCGATGATGTCGTTTCCGGCGGCTACGAAGGGTTTCCGTTCGAGCTCTAC GAAGCCGAACTGCGGGAAGGCACCGGCAAGGGCTCATCGACGGCCTTCAAAGGCGTCATCGTCGCCTTCGAAGCCGTCGC GCCGTTCCCGGGGATTTTGGTTGCGACGCGGCGGACCAATGCGGTCGTCGGCTTTTTCCGCGGCCTGTTCGGGTCCAAAC TGCAGGAGCTATCGTCGGGCGAGCCATTGCTCGACGCGGCCTACGAATTCCGCACCGACAATGTCGAGGCGGCTCGGCCG CTGGTGACCGGTCGGCTGGCGCAGGCCTTGAAATGGCTCGGCGAAACCTGGCCGGACGATCCCGCCCGCGTCGCGCTCAA CGGCGGCGACGGGTTCCTGTTGCTGCCGCAGGCGAAGAATTTCTTCGAGCTGCCGGAGATTTCGGTGCCGCTCGATTACA CCAGGCATGTCGCGCCGATGATCTCCGACATGGGCGCCATGCTGGCGACGGCGGCGCTGGTACGCAAGATCGGGGCGACG GACGAGATCGGTTGA
Upstream 100 bases:
>100_bases GGGGCGGCGCCGACGTTTTCGGATAGGCACCGTCTCGCGGCAGCGTAGTCGATACGTGGCACAAAACCAGCTATCATGAA CCTGTCGAGGCTTGCGGGGG
Downstream 100 bases:
>100_bases TCGGATCCCGCCGTCAGCAGTCGAAGCCATATTGTTCGCGCGCGGTGTCTGCTTCTTCTTTGGACATTTTCTTGAACATC ACGCAGACGGTGAAGCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MAVEAADFMPDETVIAGIRKNIEAYEAARASAVRQVRWRVPLFVGLVLLAVVVIAWLFNKVADPHEQWFSTPHVFLYVIG FAASILLYFQAMKPATRLQQSFRDTLLPIIFGFIRDVRYQHGGRPNSFDRLPREAVGPFNRQTFDDVVSGGYEGFPFELY EAELREGTGKGSSTAFKGVIVAFEAVAPFPGILVATRRTNAVVGFFRGLFGSKLQELSSGEPLLDAAYEFRTDNVEAARP LVTGRLAQALKWLGETWPDDPARVALNGGDGFLLLPQAKNFFELPEISVPLDYTRHVAPMISDMGAMLATAALVRKIGAT DEIG
Sequences:
>Translated_324_residues MAVEAADFMPDETVIAGIRKNIEAYEAARASAVRQVRWRVPLFVGLVLLAVVVIAWLFNKVADPHEQWFSTPHVFLYVIG FAASILLYFQAMKPATRLQQSFRDTLLPIIFGFIRDVRYQHGGRPNSFDRLPREAVGPFNRQTFDDVVSGGYEGFPFELY EAELREGTGKGSSTAFKGVIVAFEAVAPFPGILVATRRTNAVVGFFRGLFGSKLQELSSGEPLLDAAYEFRTDNVEAARP LVTGRLAQALKWLGETWPDDPARVALNGGDGFLLLPQAKNFFELPEISVPLDYTRHVAPMISDMGAMLATAALVRKIGAT DEIG >Mature_323_residues AVEAADFMPDETVIAGIRKNIEAYEAARASAVRQVRWRVPLFVGLVLLAVVVIAWLFNKVADPHEQWFSTPHVFLYVIGF AASILLYFQAMKPATRLQQSFRDTLLPIIFGFIRDVRYQHGGRPNSFDRLPREAVGPFNRQTFDDVVSGGYEGFPFELYE AELREGTGKGSSTAFKGVIVAFEAVAPFPGILVATRRTNAVVGFFRGLFGSKLQELSSGEPLLDAAYEFRTDNVEAARPL VTGRLAQALKWLGETWPDDPARVALNGGDGFLLLPQAKNFFELPEISVPLDYTRHVAPMISDMGAMLATAALVRKIGATD EIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35730; Mature: 35599
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVEAADFMPDETVIAGIRKNIEAYEAARASAVRQVRWRVPLFVGLVLLAVVVIAWLFNK CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VADPHEQWFSTPHVFLYVIGFAASILLYFQAMKPATRLQQSFRDTLLPIIFGFIRDVRYQ HCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH HGGRPNSFDRLPREAVGPFNRQTFDDVVSGGYEGFPFELYEAELREGTGKGSSTAFKGVI CCCCCCHHHHCCHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHH VAFEAVAPFPGILVATRRTNAVVGFFRGLFGSKLQELSSGEPLLDAAYEFRTDNVEAARP HHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHH LVTGRLAQALKWLGETWPDDPARVALNGGDGFLLLPQAKNFFELPEISVPLDYTRHVAPM HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHH ISDMGAMLATAALVRKIGATDEIG HHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AVEAADFMPDETVIAGIRKNIEAYEAARASAVRQVRWRVPLFVGLVLLAVVVIAWLFNK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VADPHEQWFSTPHVFLYVIGFAASILLYFQAMKPATRLQQSFRDTLLPIIFGFIRDVRYQ HCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH HGGRPNSFDRLPREAVGPFNRQTFDDVVSGGYEGFPFELYEAELREGTGKGSSTAFKGVI CCCCCCHHHHCCHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHH VAFEAVAPFPGILVATRRTNAVVGFFRGLFGSKLQELSSGEPLLDAAYEFRTDNVEAARP HHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHH LVTGRLAQALKWLGETWPDDPARVALNGGDGFLLLPQAKNFFELPEISVPLDYTRHVAPM HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHH ISDMGAMLATAALVRKIGATDEIG HHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA