Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13472316

Identifier: 13472316

GI number: 13472316

Start: 2079915

End: 2080391

Strand: Reverse

Name: 13472316

Synonym: mll2571

Alternate gene names: NA

Gene position: 2080391-2079915 (Counterclockwise)

Preceding gene: 13472318

Following gene: 13472315

Centisome position: 29.57

GC content: 63.94

Gene sequence:

>477_bases
GTGCAAAGTCGGGAAAAGCTCAGCGTTGCCATCGCTCCGAAACGGCGCCGGCATGCCGAAGTTGCCTGGACGGACGCTTT
CCTCCGATCACAATCGGTTACCGCGGCGTTACGCGCCGATCGCTTCGAGGCCTTCCTCCAGCCAGTCGGCGAGCAGCGGC
ATGCCAAGCAGGTACTTGGCCGTGCGCTTGTTGGCGCGCTCGCGCGCCGCCGTCACGGCATCCACCCATTCCGCGGCGTC
GTAGTCGCCGCGGCCGACCCAGGCGAGCGCGATCAGTTCGGCGGCTTCATCGACATTGAGGTCGTCGATCAGCTCGCGCA
GTTCTTCCTCGGTCAGGTTTTCCGAACTTTCCTCGGCAAGGCCGTCATGGTGATGATTGTCGTGCGTGTCGCCGTCGAAC
TCGATCTCGTGTTCGGCGCCGTCGGCGTAGTCCTCGTTGACGGCGGCACTCAGCGCCTTGGCCTTGAGGATGAATAG

Upstream 100 bases:

>100_bases
CTGATCCATCCGAGGGGACAGCGGCTGGTGATGCCTGTGACGATGTCTGGCGTCGGCCGGCGTCGCCAGCAGAACCGCGG
CCGCCAAAGGCAGCGCCAAG

Downstream 100 bases:

>100_bases
GCGCACGGTGTCGGGGCCGATAGTAAGGTCCCAGTCCTTTTCAAGCCGCTGCTGCACGGGCCGCCTCCGTCAGTCGTTTG
CCGGATGATAGCGGATTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MQSREKLSVAIAPKRRRHAEVAWTDAFLRSQSVTAALRADRFEAFLQPVGEQRHAKQVLGRALVGALARRRHGIHPFRGV
VVAAADPGERDQFGGFIDIEVVDQLAQFFLGQVFRTFLGKAVMVMIVVRVAVELDLVFGAVGVVLVDGGTQRLGLEDE

Sequences:

>Translated_158_residues
MQSREKLSVAIAPKRRRHAEVAWTDAFLRSQSVTAALRADRFEAFLQPVGEQRHAKQVLGRALVGALARRRHGIHPFRGV
VVAAADPGERDQFGGFIDIEVVDQLAQFFLGQVFRTFLGKAVMVMIVVRVAVELDLVFGAVGVVLVDGGTQRLGLEDE
>Mature_158_residues
MQSREKLSVAIAPKRRRHAEVAWTDAFLRSQSVTAALRADRFEAFLQPVGEQRHAKQVLGRALVGALARRRHGIHPFRGV
VVAAADPGERDQFGGFIDIEVVDQLAQFFLGQVFRTFLGKAVMVMIVVRVAVELDLVFGAVGVVLVDGGTQRLGLEDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17374; Mature: 17374

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSREKLSVAIAPKRRRHAEVAWTDAFLRSQSVTAALRADRFEAFLQPVGEQRHAKQVLG
CCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RALVGALARRRHGIHPFRGVVVAAADPGERDQFGGFIDIEVVDQLAQFFLGQVFRTFLGK
HHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHH
AVMVMIVVRVAVELDLVFGAVGVVLVDGGTQRLGLEDE
HHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MQSREKLSVAIAPKRRRHAEVAWTDAFLRSQSVTAALRADRFEAFLQPVGEQRHAKQVLG
CCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RALVGALARRRHGIHPFRGVVVAAADPGERDQFGGFIDIEVVDQLAQFFLGQVFRTFLGK
HHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHH
AVMVMIVVRVAVELDLVFGAVGVVLVDGGTQRLGLEDE
HHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA