| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472235
Identifier: 13472235
GI number: 13472235
Start: 1998139
End: 1999197
Strand: Reverse
Name: 13472235
Synonym: mll2462
Alternate gene names: NA
Gene position: 1999197-1998139 (Counterclockwise)
Preceding gene: 13472236
Following gene: 13472234
Centisome position: 28.41
GC content: 66.29
Gene sequence:
>1059_bases ATGTCCGAAACACATTCGCATCTTTGGCCCGGCGTACCGCTCGCCCTTGGCTCGGCCGCTCTGTTCGGCGCGACCCCGCC GCTTTCCAAGCTGCTGCTCGATGCCGTGAACCCCTTCATGCTGGCCGGACTGCTCTATCTCGGCGCCGGTCTCGGCCTCG CTCTCTATCGCTTGCTTGGCGGCAAGCAGGCGGCGGCTGGTGAAGCGCAACTGGCCGCCCGGGATATCCCCTGGCTGGCC CTGGCAATCGGCATGGGTGGCATCCTCGCGCCGGTGCTGTTGATGTTCGGCCTCAGCCGCAACACGGCATCCAGTTCAGC GCTGCTGCTCAACCTGGAAGGGCTGGCGACGATGGCGATCGCCTGGCTCGTCTATCGCGAGAATGTCGACCGGCGCCTGC TTTTTGGCGCCTTCGCCATTCTCGCGGGCGCGGTGCTGTTGTCGTGGGACGGCGGCGGCATTGCTTTCAACCCGGGCGCC CTGCTGGTGGCGGGGGCTTGCGTGGCCTGGGGGCTGGACAACAATTTCACGCGCAGGATCTCGGCCACCGACCCCGTGGT GATCGCCATGCTGAAAGGCCTGGTGGCGGGTGCGGCCAATGTCGGGTTGGCGCTTGCCGCCGGGGCGTCGTTTCCCGCGA TGTCGATTGTCGCGGCCACGGCCGCGGTCGGCTTCCTCGGCATCGGCGTCAGCCTGGCGATGTTCATCCTGGCGCTGCGC CATCTCGGGACGGCGCGCACAGGCGCCTATTATTCGCTCGCTCCGTTCATCGGCGCGCTGCTGGCCATCGTCATGCTGGG CGATGCCGTCACCTTCAAACTGGTGGTCGCGGGGCTTCTGATGGGCGTCGGCCTGTGGCTGCATCTGTCGGAACGCCATG AGCACGAGCACGACCATGAGGCGCTGGAACATGAGCACAGCCATGTGCATGACGAGCACCACCAGCACGATCATGACGGG CCGGTGAGCGAGCCGCATTCGCATTGGCACCGTCATGCGCCGATGCGCCACCGGCATCCGCACTATCCAGACCTGCATCA TCGGCATAGCCACGGCTGA
Upstream 100 bases:
>100_bases GCCTGTGCGAAGAATGGGCGCTGTTTCGCGACAACAAATGCGTCGGGCCAAAGGCGGCCATGCGCGGCAAATGACATGCG CGCTGTCATAGGGTGAGATG
Downstream 100 bases:
>100_bases GCACGCCAAGATCATGCTCAAGCAAACGCCCAAGCCTGAACTGACCGTCTGGTACAACACGCGTTGCCCTGTCTGCGATG CGGGCATCAGCTGGCAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MSETHSHLWPGVPLALGSAALFGATPPLSKLLLDAVNPFMLAGLLYLGAGLGLALYRLLGGKQAAAGEAQLAARDIPWLA LAIGMGGILAPVLLMFGLSRNTASSSALLLNLEGLATMAIAWLVYRENVDRRLLFGAFAILAGAVLLSWDGGGIAFNPGA LLVAGACVAWGLDNNFTRRISATDPVVIAMLKGLVAGAANVGLALAAGASFPAMSIVAATAAVGFLGIGVSLAMFILALR HLGTARTGAYYSLAPFIGALLAIVMLGDAVTFKLVVAGLLMGVGLWLHLSERHEHEHDHEALEHEHSHVHDEHHQHDHDG PVSEPHSHWHRHAPMRHRHPHYPDLHHRHSHG
Sequences:
>Translated_352_residues MSETHSHLWPGVPLALGSAALFGATPPLSKLLLDAVNPFMLAGLLYLGAGLGLALYRLLGGKQAAAGEAQLAARDIPWLA LAIGMGGILAPVLLMFGLSRNTASSSALLLNLEGLATMAIAWLVYRENVDRRLLFGAFAILAGAVLLSWDGGGIAFNPGA LLVAGACVAWGLDNNFTRRISATDPVVIAMLKGLVAGAANVGLALAAGASFPAMSIVAATAAVGFLGIGVSLAMFILALR HLGTARTGAYYSLAPFIGALLAIVMLGDAVTFKLVVAGLLMGVGLWLHLSERHEHEHDHEALEHEHSHVHDEHHQHDHDG PVSEPHSHWHRHAPMRHRHPHYPDLHHRHSHG >Mature_351_residues SETHSHLWPGVPLALGSAALFGATPPLSKLLLDAVNPFMLAGLLYLGAGLGLALYRLLGGKQAAAGEAQLAARDIPWLAL AIGMGGILAPVLLMFGLSRNTASSSALLLNLEGLATMAIAWLVYRENVDRRLLFGAFAILAGAVLLSWDGGGIAFNPGAL LVAGACVAWGLDNNFTRRISATDPVVIAMLKGLVAGAANVGLALAAGASFPAMSIVAATAAVGFLGIGVSLAMFILALRH LGTARTGAYYSLAPFIGALLAIVMLGDAVTFKLVVAGLLMGVGLWLHLSERHEHEHDHEALEHEHSHVHDEHHQHDHDGP VSEPHSHWHRHAPMRHRHPHYPDLHHRHSHG
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 37153; Mature: 37021
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETHSHLWPGVPLALGSAALFGATPPLSKLLLDAVNPFMLAGLLYLGAGLGLALYRLLG CCCCCCCCCCCCHHHHCCHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC GKQAAAGEAQLAARDIPWLALAIGMGGILAPVLLMFGLSRNTASSSALLLNLEGLATMAI CCCCCCCCHHHHHCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHH AWLVYRENVDRRLLFGAFAILAGAVLLSWDGGGIAFNPGALLVAGACVAWGLDNNFTRRI HHHHHHHCCCHHHHHHHHHHHHHHHEEEECCCCEEECCCHHHHHHHHHHCCCCCCCEEEE SATDPVVIAMLKGLVAGAANVGLALAAGASFPAMSIVAATAAVGFLGIGVSLAMFILALR CCCCHHHHHHHHHHHHHHHHHCHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLGTARTGAYYSLAPFIGALLAIVMLGDAVTFKLVVAGLLMGVGLWLHLSERHEHEHDHE HHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEHHHHCCHHHHH ALEHEHSHVHDEHHQHDHDGPVSEPHSHWHRHAPMRHRHPHYPDLHHRHSHG HHHHHHHHHCHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SETHSHLWPGVPLALGSAALFGATPPLSKLLLDAVNPFMLAGLLYLGAGLGLALYRLLG CCCCCCCCCCCHHHHCCHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC GKQAAAGEAQLAARDIPWLALAIGMGGILAPVLLMFGLSRNTASSSALLLNLEGLATMAI CCCCCCCCHHHHHCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHH AWLVYRENVDRRLLFGAFAILAGAVLLSWDGGGIAFNPGALLVAGACVAWGLDNNFTRRI HHHHHHHCCCHHHHHHHHHHHHHHHEEEECCCCEEECCCHHHHHHHHHHCCCCCCCEEEE SATDPVVIAMLKGLVAGAANVGLALAAGASFPAMSIVAATAAVGFLGIGVSLAMFILALR CCCCHHHHHHHHHHHHHHHHHCHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLGTARTGAYYSLAPFIGALLAIVMLGDAVTFKLVVAGLLMGVGLWLHLSERHEHEHDHE HHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEHHHHCCHHHHH ALEHEHSHVHDEHHQHDHDGPVSEPHSHWHRHAPMRHRHPHYPDLHHRHSHG HHHHHHHHHCHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]