| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472195
Identifier: 13472195
GI number: 13472195
Start: 1961831
End: 1962316
Strand: Reverse
Name: 13472195
Synonym: mll2410
Alternate gene names: NA
Gene position: 1962316-1961831 (Counterclockwise)
Preceding gene: 13472196
Following gene: 13472185
Centisome position: 27.89
GC content: 65.02
Gene sequence:
>486_bases ATGAACGGCGGGTTCGTAAACAGTTCAGGCAGGCTGGCGCATTCTCCCATCATCGCTTTCAAGAGGATGGGCGCAAGCCC GCAACAAGGAGAGAAGACCATGTTCAATACGGTGAAAACGGCAGCCCTCTCGGCCCTGATCGGCCTCGGCGCGCTGACGG CCGTTCCTGCCCATGCCGATAGCCTCTATCTCGGCTTCGGCAACAACCAGGATCCGCGCTTCGGGGTCTATACCGGCGAC GACGGCTATCGGCATCGCCGCGATGAGCGCCGTGACGACTGGCGCGGTGACGATTGGCGCCGCGACGGCTGGCGCCGCGG CTGTTCGCCCGATCGCGCTCTCGACAAGGCTGAGCGCATGGGCCTCTACCGCGCCCGCATCGTCGACGCCAACCGTCGGG TGGTGAAGGTCGTGGGCCGCCAGGATGGCGACCGCGTCGTCATCGTGTTCGCCAACGAGCGCGGTTGCCCGGTTATCTAT CGCTGA
Upstream 100 bases:
>100_bases GCCTCCGCACGGCTCCGAACAAGGAACGAGCAAGAATTTTTTGGGCGCGCATTGTTCGAAACCTGGCCAAGATTTCGTTT TTCCGCCACATGAACCGCAG
Downstream 100 bases:
>100_bases GGCTGCGGCATAACCCCCTGCGAGGGTTAGCCGGGAGACACGACCCCTACGAGGGTCCGTCTGGAGACGCGACCTTCTGC GAAGGTCGGTCTGGAGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MNGGFVNSSGRLAHSPIIAFKRMGASPQQGEKTMFNTVKTAALSALIGLGALTAVPAHADSLYLGFGNNQDPRFGVYTGD DGYRHRRDERRDDWRGDDWRRDGWRRGCSPDRALDKAERMGLYRARIVDANRRVVKVVGRQDGDRVVIVFANERGCPVIY R
Sequences:
>Translated_161_residues MNGGFVNSSGRLAHSPIIAFKRMGASPQQGEKTMFNTVKTAALSALIGLGALTAVPAHADSLYLGFGNNQDPRFGVYTGD DGYRHRRDERRDDWRGDDWRRDGWRRGCSPDRALDKAERMGLYRARIVDANRRVVKVVGRQDGDRVVIVFANERGCPVIY R >Mature_161_residues MNGGFVNSSGRLAHSPIIAFKRMGASPQQGEKTMFNTVKTAALSALIGLGALTAVPAHADSLYLGFGNNQDPRFGVYTGD DGYRHRRDERRDDWRGDDWRRDGWRRGCSPDRALDKAERMGLYRARIVDANRRVVKVVGRQDGDRVVIVFANERGCPVIY R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18040; Mature: 18040
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGGFVNSSGRLAHSPIIAFKRMGASPQQGEKTMFNTVKTAALSALIGLGALTAVPAHAD CCCCEECCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SLYLGFGNNQDPRFGVYTGDDGYRHRRDERRDDWRGDDWRRDGWRRGCSPDRALDKAERM EEEEECCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHC GLYRARIVDANRRVVKVVGRQDGDRVVIVFANERGCPVIYR CHHHEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEC >Mature Secondary Structure MNGGFVNSSGRLAHSPIIAFKRMGASPQQGEKTMFNTVKTAALSALIGLGALTAVPAHAD CCCCEECCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SLYLGFGNNQDPRFGVYTGDDGYRHRRDERRDDWRGDDWRRDGWRRGCSPDRALDKAERM EEEEECCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHC GLYRARIVDANRRVVKVVGRQDGDRVVIVFANERGCPVIYR CHHHEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA