| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is bp26 [H]
Identifier: 13472194
GI number: 13472194
Start: 1960857
End: 1961567
Strand: Direct
Name: bp26 [H]
Synonym: mlr2408
Alternate gene names: 13472194
Gene position: 1960857-1961567 (Clockwise)
Preceding gene: 13472193
Following gene: 13472197
Centisome position: 27.87
GC content: 65.26
Gene sequence:
>711_bases ATGACCAGACATCTTTTCCCCCTCGCACTCGCCGCTGCAATCGCTTTTCCGGCGATGGCTGGAGCCGCCGATTCGCCGAC GCCCGCCCGCATCATTGTTTCGGGTGAAGGCGAAGCGACCACCCCTCCCGACCTGGCTTTGCTGTCGCTCAGCGTGATGC GCGAAGCCAAGACGGCGCGGGCCGCACTTGACGCCAACAACGACGCCATGGCCGCCGTGATCGCGGCGATGAAGGCGGCG GGCATCAAGGACCGCGACCTGCAGACCGCGGGCATCCAGATCAACCCGCGCTACAACTACACCAACAAGCCCGATGGCAG CCAGGAAGGCGAGCTCGTCGCCTACCAGGTGACCAACACGCTTTCGGTCCGCGTGCGCGACATCGACAAGACGGGAGAGA TCCTCGACAAGGCTGTTTCGCTCGGTGTCAACCAGGGCGGCGGCATCGCCTTCACCAATGACGATCCAGCGGCCACCGTC ACCGAGGCGCGCAAGAAAGCGGTGGCCGACGCCATGGCCAAGGCCAAGACGCTTGCCGCGGCGGCCGGCGTCAGCCTCGG CAAGGTGCTCGAGATCACGGATCAGAACATCAGGCCGGCACCGATGCCGATCAACGCCAAGGCTTTCGACGCCGCGGCAG GCGCCGCGCCGGTGCAGGCCGGCGAGAACGCCTATAACGTCCAGGTGACCGTAACCTTCGAACTGAAGTAA
Upstream 100 bases:
>100_bases CACAAGGCTTTCCCGACGGGCTTTCGCGGAACGCCCAAATCAACCCATAATCGCGCTCTACGCGACCTCTGCGACTGGAT CGCAGACCAAGGAGATTTTC
Downstream 100 bases:
>100_bases CCAGCTTCGACAACCCAAGGCCGGGCTCTTCGCCCAGCCATGGGATTGTCCGCCGGCGCATGCATGAAAAACCCCGCGGG ATCGCTCCCGCGGGGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MTRHLFPLALAAAIAFPAMAGAADSPTPARIIVSGEGEATTPPDLALLSLSVMREAKTARAALDANNDAMAAVIAAMKAA GIKDRDLQTAGIQINPRYNYTNKPDGSQEGELVAYQVTNTLSVRVRDIDKTGEILDKAVSLGVNQGGGIAFTNDDPAATV TEARKKAVADAMAKAKTLAAAAGVSLGKVLEITDQNIRPAPMPINAKAFDAAAGAAPVQAGENAYNVQVTVTFELK
Sequences:
>Translated_236_residues MTRHLFPLALAAAIAFPAMAGAADSPTPARIIVSGEGEATTPPDLALLSLSVMREAKTARAALDANNDAMAAVIAAMKAA GIKDRDLQTAGIQINPRYNYTNKPDGSQEGELVAYQVTNTLSVRVRDIDKTGEILDKAVSLGVNQGGGIAFTNDDPAATV TEARKKAVADAMAKAKTLAAAAGVSLGKVLEITDQNIRPAPMPINAKAFDAAAGAAPVQAGENAYNVQVTVTFELK >Mature_235_residues TRHLFPLALAAAIAFPAMAGAADSPTPARIIVSGEGEATTPPDLALLSLSVMREAKTARAALDANNDAMAAVIAAMKAAG IKDRDLQTAGIQINPRYNYTNKPDGSQEGELVAYQVTNTLSVRVRDIDKTGEILDKAVSLGVNQGGGIAFTNDDPAATVT EARKKAVADAMAKAKTLAAAAGVSLGKVLEITDQNIRPAPMPINAKAFDAAAGAAPVQAGENAYNVQVTVTFELK
Specific function: Unknown
COG id: COG2968
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789289, Length=240, Percent_Identity=30, Blast_Score=80, Evalue=8e-17,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007497 [H]
Pfam domain/function: PF04402 DUF541 [H]
EC number: NA
Molecular weight: Translated: 24327; Mature: 24196
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRHLFPLALAAAIAFPAMAGAADSPTPARIIVSGEGEATTPPDLALLSLSVMREAKTAR CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH AALDANNDAMAAVIAAMKAAGIKDRDLQTAGIQINPRYNYTNKPDGSQEGELVAYQVTNT HHHCCCCCHHHHHHHHHHHCCCCCCCCEECCEEECCCCCCCCCCCCCCCCCEEEEEECCE LSVRVRDIDKTGEILDKAVSLGVNQGGGIAFTNDDPAATVTEARKKAVADAMAKAKTLAA EEEEEEECCHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH AAGVSLGKVLEITDQNIRPAPMPINAKAFDAAAGAAPVQAGENAYNVQVTVTFELK HHCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEEEEEEEEC >Mature Secondary Structure TRHLFPLALAAAIAFPAMAGAADSPTPARIIVSGEGEATTPPDLALLSLSVMREAKTAR CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH AALDANNDAMAAVIAAMKAAGIKDRDLQTAGIQINPRYNYTNKPDGSQEGELVAYQVTNT HHHCCCCCHHHHHHHHHHHCCCCCCCCEECCEEECCCCCCCCCCCCCCCCCEEEEEECCE LSVRVRDIDKTGEILDKAVSLGVNQGGGIAFTNDDPAATVTEARKKAVADAMAKAKTLAA EEEEEEECCHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH AAGVSLGKVLEITDQNIRPAPMPINAKAFDAAAGAAPVQAGENAYNVQVTVTFELK HHCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8748294 [H]