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The map label for this gene is emrB [C]

Identifier: 13472173

GI number: 13472173

Start: 1932226

End: 1932654

Strand: Direct

Name: emrB [C]

Synonym: mlr2380

Alternate gene names: 13472173

Gene position: 1932226-1932654 (Clockwise)

Preceding gene: 13472172

Following gene: 13472174

Centisome position: 27.46

GC content: 62.94

Gene sequence:

>429_bases
TTGCCCTTCCTGTTCATTCCGATCTCGACGGCAGCATATCTTGGCCTGCCGCCTTCAAAAACCGACCAGGCTTCCGCCCT
GATCAACCTCGCCCGCAACATTGGCGGCAGCATCGGCGTGTCGCTCACCAATACCGTGATCGCTCAGAACGCGCAGATGC
ATCAATCGAACCTCGTCGCCAACACCGTGCAGTCGTCATCGACCTATCAGCAGACCCTTGGCCAGGTCGGCGAATATTTC
CCAGCGCAGGGCTCGCCGGCCGTTCAGGCAAAGGCGCAGGCGGTCGGCTGGGTCGCGCAGCTTGTCGGTCGCCAGGCGAC
GCTGCTCGCCTGTGTCGACGTCTTTCGCTATTCGGCGATCGCCACCGCGCTGCTTGTGCCACTGGCGCTCCTGCTGCGCT
CGCCGAAGTCGACGCAAGCTAGGACGTAG

Upstream 100 bases:

>100_bases
TCGCTGTTTCGGAGGTGCCTCTCGAAAATCGCGAGCTTCTCCAGGTAGCCAATCCGCACCTATGCTCCGCAGCCATCGCT
TTTGAAACTGCCAAGCGTTT

Downstream 100 bases:

>100_bases
CGCGGGCAAGCCTGCAGGCAAAGTACGCTTGAACACTGCGAAACGTGCTGGTTCTAGCCGAGAACGCCAATGAAGTGGTT
TTTGAGGCCAACGAGCTTGA

Product: transport protein

Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]

Alternate protein names: Drug Resistance Transporter EmrB/QacA Subfamily; EmrB/QacA Subfamily Drug Resistance Transporter; Multidrug Resistance Protein EmrB-Like; Drug-Resistance Related Membrane Protein; Efflux System Protein; Facilitator Superfamily Multidrug Efflux Transporter; Drug Resistance Transporter EmrB/QacA Subfamily Protein

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MPFLFIPISTAAYLGLPPSKTDQASALINLARNIGGSIGVSLTNTVIAQNAQMHQSNLVANTVQSSSTYQQTLGQVGEYF
PAQGSPAVQAKAQAVGWVAQLVGRQATLLACVDVFRYSAIATALLVPLALLLRSPKSTQART

Sequences:

>Translated_142_residues
MPFLFIPISTAAYLGLPPSKTDQASALINLARNIGGSIGVSLTNTVIAQNAQMHQSNLVANTVQSSSTYQQTLGQVGEYF
PAQGSPAVQAKAQAVGWVAQLVGRQATLLACVDVFRYSAIATALLVPLALLLRSPKSTQART
>Mature_141_residues
PFLFIPISTAAYLGLPPSKTDQASALINLARNIGGSIGVSLTNTVIAQNAQMHQSNLVANTVQSSSTYQQTLGQVGEYFP
AQGSPAVQAKAQAVGWVAQLVGRQATLLACVDVFRYSAIATALLVPLALLLRSPKSTQART

Specific function: Translocase That Confers Resistance To Substances Of High Hydrophobicity. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14884; Mature: 14753

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFLFIPISTAAYLGLPPSKTDQASALINLARNIGGSIGVSLTNTVIAQNAQMHQSNLVA
CCEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHH
NTVQSSSTYQQTLGQVGEYFPAQGSPAVQAKAQAVGWVAQLVGRQATLLACVDVFRYSAI
HHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ATALLVPLALLLRSPKSTQART
HHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PFLFIPISTAAYLGLPPSKTDQASALINLARNIGGSIGVSLTNTVIAQNAQMHQSNLVA
CEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHH
NTVQSSSTYQQTLGQVGEYFPAQGSPAVQAKAQAVGWVAQLVGRQATLLACVDVFRYSAI
HHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ATALLVPLALLLRSPKSTQART
HHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA