| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472166
Identifier: 13472166
GI number: 13472166
Start: 1924376
End: 1924921
Strand: Direct
Name: 13472166
Synonym: mlr2370
Alternate gene names: NA
Gene position: 1924376-1924921 (Clockwise)
Preceding gene: 13472164
Following gene: 13472169
Centisome position: 27.35
GC content: 64.29
Gene sequence:
>546_bases GTGGCAGCCATGGCCAATGAACTCGGATACAGAACGGCACGGGATCTGTTTCTTGCTTGTCCCGCCATCGCCAGGGACAT GAAATCGCTGGCCACCGGCCAGCCGCCGCTTGATTTTTGCCGAGCCTTGCTTGCCGGGCGCGTGCCGGAAGAAGCCGTCA CGTTCTGTGCCTACCTCCTGCCCGAGCGAGCCGCCGTCTGGTGGGGACATGAGTGCCTGAGCAATCTCGCCGAGCTCCTC GCGGACCGGGATCTCGAATTGCTGGCGCTTGTCCATGACCGCGTCGGCGAACCTGACAATCCCCACCATCAAGCCGTCCT GAGCAATTCCCTGGACCTGCCGCCGGCGACACCGGCCGCCTGGATCGCTCTGGCAGCGGTATGGCGCGACCCGACCCTCG ACATGGTGTCGACCGGATTTCCTGCCGCCCATGCCGTGAATGCCGGAATTCTGGCCGGGCTGGCCCGTGCCTCGCTGGCG GACCGGTTTTCCGTGCTTTCGGCCTTTGTCGAAATGGGCATCCAGATGGCGGAGATGGAGGCGTAA
Upstream 100 bases:
>100_bases GTGAACAAACGCATGCCGCCCTGGTCGCCACCTGCCAACGACTGACGCTTGACCGGCGCTCAGCCACAGGCTTGAGTGCT GTTCTGGTGGTTCTTGGGGT
Downstream 100 bases:
>100_bases CGGCATTCGCCGATCGCTACGCGCCATCCGTCATTGCTGGCCTCAGGCCGGCATTATTTGCAGCCGCCTTGCGCCCATCT GGCCAGCGCGACCTTGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MAAMANELGYRTARDLFLACPAIARDMKSLATGQPPLDFCRALLAGRVPEEAVTFCAYLLPERAAVWWGHECLSNLAELL ADRDLELLALVHDRVGEPDNPHHQAVLSNSLDLPPATPAAWIALAAVWRDPTLDMVSTGFPAAHAVNAGILAGLARASLA DRFSVLSAFVEMGIQMAEMEA
Sequences:
>Translated_181_residues MAAMANELGYRTARDLFLACPAIARDMKSLATGQPPLDFCRALLAGRVPEEAVTFCAYLLPERAAVWWGHECLSNLAELL ADRDLELLALVHDRVGEPDNPHHQAVLSNSLDLPPATPAAWIALAAVWRDPTLDMVSTGFPAAHAVNAGILAGLARASLA DRFSVLSAFVEMGIQMAEMEA >Mature_180_residues AAMANELGYRTARDLFLACPAIARDMKSLATGQPPLDFCRALLAGRVPEEAVTFCAYLLPERAAVWWGHECLSNLAELLA DRDLELLALVHDRVGEPDNPHHQAVLSNSLDLPPATPAAWIALAAVWRDPTLDMVSTGFPAAHAVNAGILAGLARASLAD RFSVLSAFVEMGIQMAEMEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19432; Mature: 19300
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAMANELGYRTARDLFLACPAIARDMKSLATGQPPLDFCRALLAGRVPEEAVTFCAYLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHH PERAAVWWGHECLSNLAELLADRDLELLALVHDRVGEPDNPHHQAVLSNSLDLPPATPAA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHH WIALAAVWRDPTLDMVSTGFPAAHAVNAGILAGLARASLADRFSVLSAFVEMGIQMAEME HHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHC A C >Mature Secondary Structure AAMANELGYRTARDLFLACPAIARDMKSLATGQPPLDFCRALLAGRVPEEAVTFCAYLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHH PERAAVWWGHECLSNLAELLADRDLELLALVHDRVGEPDNPHHQAVLSNSLDLPPATPAA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHH WIALAAVWRDPTLDMVSTGFPAAHAVNAGILAGLARASLADRFSVLSAFVEMGIQMAEME HHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA