| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is proA [H]
Identifier: 13472133
GI number: 13472133
Start: 1880853
End: 1881602
Strand: Direct
Name: proA [H]
Synonym: mlr2332
Alternate gene names: 13472133
Gene position: 1880853-1881602 (Clockwise)
Preceding gene: 13472132
Following gene: 13472135
Centisome position: 26.73
GC content: 61.87
Gene sequence:
>750_bases ATGACGCATACCTCCGACATAATCCGGCCGCCCAAGGACCTGATCGAGGGATTGAGGGAGATCGGCGCAGCGACCGTTGC CGGCACGCTAGGCCATATGGGCTTCCGCAATCCGCATATGGTCGGACCGGTGGCGCAGAACCACGGCAAGTCGATCGTCG GGCCGGCGCTGACGCTGCAGTTCCTTCCGCAGCGGCCGGACCTCTTCAACGAGGGAGAGTATGCCGACCCGGAGACGCAA CTGCACCGGCACGTGCTCTATCACGCCCAGGAAGGCGACGTGGTCGTGGTCGACGCGCGCGGCGACATGAGCTCGGGTGT CTTCGGCGACATGATGTCGACCTACTTCAAGGGCAGAGGCGGCGCCGGCATCGTCATCGATGGATGCATGCGCGACAGGC CCAATGTCGAAAAACTCGACCTGCCGCTTTGGCTGCGCGGCTGGACGCCCAACTATCATGTGCAGACCAGCATCTATCCC AATGCCGTCAATGTTCCGATTGCATGCGGCGGCGTCACGGTGATCCCCGGCGACATCATCGTTGCCGACGATGATGGCGT CGTGGTGGTTCCCGTCGCAATGGCCGCAAAGGTCATCGAAGAAGCGAAGAAGCATCACGATTGGGAAGAGTTCTCGCGAG AGAAGCTCCTCCAAGGCGCCCCATTGCAACGCTACTATCCGCTGCATGACGACGCGCGCGCAGAGTACGAGGCGTGGCGC AAAGCAAACGGCTTGGGGAACCCAAATTAG
Upstream 100 bases:
>100_bases CGATCCAGGCGCAGAGTTTCCGCTTCTGGGAAGCGCCCCACCTCAAGCGCCGCGACGGTTCTGTCACCAACTGGTAGTTC AATTTCAACCGGAGTCCACC
Downstream 100 bases:
>100_bases CGCGGGGATCACTCGCTGCGGGCGGCAGCCCTTCCGGCGGCGCGATGGCCTCTCGCCGCAGCGTCGCGCGATATTTTGAG CCTGCCTCGCCCACGGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: 4-hydroxy-2-oxoglutarate aldolase [H]
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MTHTSDIIRPPKDLIEGLREIGAATVAGTLGHMGFRNPHMVGPVAQNHGKSIVGPALTLQFLPQRPDLFNEGEYADPETQ LHRHVLYHAQEGDVVVVDARGDMSSGVFGDMMSTYFKGRGGAGIVIDGCMRDRPNVEKLDLPLWLRGWTPNYHVQTSIYP NAVNVPIACGGVTVIPGDIIVADDDGVVVVPVAMAAKVIEEAKKHHDWEEFSREKLLQGAPLQRYYPLHDDARAEYEAWR KANGLGNPN
Sequences:
>Translated_249_residues MTHTSDIIRPPKDLIEGLREIGAATVAGTLGHMGFRNPHMVGPVAQNHGKSIVGPALTLQFLPQRPDLFNEGEYADPETQ LHRHVLYHAQEGDVVVVDARGDMSSGVFGDMMSTYFKGRGGAGIVIDGCMRDRPNVEKLDLPLWLRGWTPNYHVQTSIYP NAVNVPIACGGVTVIPGDIIVADDDGVVVVPVAMAAKVIEEAKKHHDWEEFSREKLLQGAPLQRYYPLHDDARAEYEAWR KANGLGNPN >Mature_248_residues THTSDIIRPPKDLIEGLREIGAATVAGTLGHMGFRNPHMVGPVAQNHGKSIVGPALTLQFLPQRPDLFNEGEYADPETQL HRHVLYHAQEGDVVVVDARGDMSSGVFGDMMSTYFKGRGGAGIVIDGCMRDRPNVEKLDLPLWLRGWTPNYHVQTSIYPN AVNVPIACGGVTVIPGDIIVADDDGVVVVPVAMAAKVIEEAKKHHDWEEFSREKLLQGAPLQRYYPLHDDARAEYEAWRK ANGLGNPN
Specific function: Plays a role in protocatechuate degradation. Has a broad substrate specificity and catalyzes the aldol cleavage of 4- hydroxy-4-methyl-2-oxoglutarate, 4-hydroxy-2-oxoglutarate and 4- carboxy-4-hydroxy-2-oxoadipate, and the decarboxylation of oxaloacetate.
COG id: COG0684
COG function: function code H; Demethylmenaquinone methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014165 - InterPro: IPR005493 [H]
Pfam domain/function: PF03737 Methyltransf_6 [H]
EC number: =4.1.1.3; =4.1.3.16; =4.1.3.17 [H]
Molecular weight: Translated: 27333; Mature: 27202
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHTSDIIRPPKDLIEGLREIGAATVAGTLGHMGFRNPHMVGPVAQNHGKSIVGPALTLQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHEEE FLPQRPDLFNEGEYADPETQLHRHVLYHAQEGDVVVVDARGDMSSGVFGDMMSTYFKGRG ECCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCEEEEECCCCCCCCHHHHHHHHHHCCCC GAGIVIDGCMRDRPNVEKLDLPLWLRGWTPNYHVQTSIYPNAVNVPIACGGVTVIPGDII CCEEEEECCCCCCCCCCEECCCEEEECCCCCEEEEEEECCCCCCCCEEECCEEEECCCEE VADDDGVVVVPVAMAAKVIEEAKKHHDWEEFSREKLLQGAPLQRYYPLHDDARAEYEAWR EECCCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHH KANGLGNPN HHCCCCCCC >Mature Secondary Structure THTSDIIRPPKDLIEGLREIGAATVAGTLGHMGFRNPHMVGPVAQNHGKSIVGPALTLQ CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHEEE FLPQRPDLFNEGEYADPETQLHRHVLYHAQEGDVVVVDARGDMSSGVFGDMMSTYFKGRG ECCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCEEEEECCCCCCCCHHHHHHHHHHCCCC GAGIVIDGCMRDRPNVEKLDLPLWLRGWTPNYHVQTSIYPNAVNVPIACGGVTVIPGDII CCEEEEECCCCCCCCCCEECCCEEEECCCCCEEEEEEECCCCCCCCEEECCEEEECCCEE VADDDGVVVVPVAMAAKVIEEAKKHHDWEEFSREKLLQGAPLQRYYPLHDDARAEYEAWR EECCCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHH KANGLGNPN HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11826967 [H]