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The map label for this gene is dgoD [H]

Identifier: 13472123

GI number: 13472123

Start: 1869922

End: 1871121

Strand: Reverse

Name: dgoD [H]

Synonym: mll2320

Alternate gene names: 13472123

Gene position: 1871121-1869922 (Counterclockwise)

Preceding gene: 13472124

Following gene: 13472122

Centisome position: 26.59

GC content: 62.58

Gene sequence:

>1200_bases
ATGAAGATCACCGACCTGCGTTGCGCCGTCATCGGCAAGCACCCGATTGTCCGCATCGTCACGGACGAAGGTCTCCATGG
CCTTGGTGAGGTCGAGTTCACCAAGACCTATCTCAAGCCCTTTGTGCTGCATTTCCGCGAGGCGTTGATCGGCGAGGACC
CGACCGACGTCGAGCGGGTGATGCTGAAGATCCGCCAGCGCGGCTCGTTCAAGCCCTATGGCGCCGCCGTCTCCGCCATC
GAGCATGCCTTATGGGACATCGCCGGCAAGGCGGCGGGCGTGCCGGTCTACAAACTGCTTGGCGGCAAGGTGCGCGACAA
GGTGCGGGTCTACAACGGCTCGATCCGCCGGAAACGCGCCGGCGACCGGCCGGAGGACTACGCCGCCGACGTCAAATGGA
TGATGGAGCAGCCGCAGAACTTCTTCATGGTCAAGCAGGGGATCTCGTTCCACTCCAACATGAAGGACAGCATCGAGGGC
TTCCATTACGGCGTGACGCAGAAGAAGGCCGGCTATCACGGCGCCATGGATCAGGGCGTGATCAGCGAACGCGGTTTCAA
TCACATGCTCGACTGCGTGATCGCGATGAAGGAAGTACTGGGCGACAAGGTCAGCCTGGCGCTCGACTGCGGCCCGGGCT
GGATGCTGCCCGATGCGATCAAGTTCGCCCGAGCGGTCGAGAAGTACAATCTGATGTGGCTCGAGGACATGCTGACCGGC
GACTATGTGCCGTGGGTCAATCCGCAAGCCTATCGCGAGCTGACCACCTCCACCTCGACGCCGATCCACACCGGCGAGCA
GATCTACCTCAGGCACAATTTCAAGGAACTGATCGAGACGCAGGCGGTGCGGGTCATCGGTCCGGACCCGGCCGATATCG
GCGGCATTGCCGAGCTCAAATGGGTTGCCGAGCACGCCTATATGCACTCGATCCTGATGGCGCCGCACGGCACCGCGAAT
GGCCTGCTCGGCCTCGGCGCGCTGATCAATGTCTGCGCCACCTTGCCGGCAAATTACGTTGCGTTCGAATATCCCAGCGC
CTCGGACCCGTGGTGGGAGGATCTGGTGATCGGCCTGCCGGCGCAGATCGTCAGGGACAGCATGGTGGACCTGCTCGAAG
CGCCGGGCCTGGGGCTCGATATCGACGCCGAAGCGGCCAGGAAGTATCTCGGCGAAGAGGATGCGGGCTTCTTCGACTGA

Upstream 100 bases:

>100_bases
GGCCGTGGACGAGTCTCAGCGCGACGGGCAGATCATCGCCAATATCAGCAGCCAGCTGCTCACGCCGACAGCTTTCTCGT
CCGTGAAATAGGACCGCGCC

Downstream 100 bases:

>100_bases
ACCACCCTTGTTTCGCCATGCGAGCATGTGCCTGACGCCGGCTTCCGACAGCCGCCCGGGCGGCGTTTGCGGTGCTGGTC
GCCGCCGGCCTGCAGCCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: GalD [H]

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MKITDLRCAVIGKHPIVRIVTDEGLHGLGEVEFTKTYLKPFVLHFREALIGEDPTDVERVMLKIRQRGSFKPYGAAVSAI
EHALWDIAGKAAGVPVYKLLGGKVRDKVRVYNGSIRRKRAGDRPEDYAADVKWMMEQPQNFFMVKQGISFHSNMKDSIEG
FHYGVTQKKAGYHGAMDQGVISERGFNHMLDCVIAMKEVLGDKVSLALDCGPGWMLPDAIKFARAVEKYNLMWLEDMLTG
DYVPWVNPQAYRELTTSTSTPIHTGEQIYLRHNFKELIETQAVRVIGPDPADIGGIAELKWVAEHAYMHSILMAPHGTAN
GLLGLGALINVCATLPANYVAFEYPSASDPWWEDLVIGLPAQIVRDSMVDLLEAPGLGLDIDAEAARKYLGEEDAGFFD

Sequences:

>Translated_399_residues
MKITDLRCAVIGKHPIVRIVTDEGLHGLGEVEFTKTYLKPFVLHFREALIGEDPTDVERVMLKIRQRGSFKPYGAAVSAI
EHALWDIAGKAAGVPVYKLLGGKVRDKVRVYNGSIRRKRAGDRPEDYAADVKWMMEQPQNFFMVKQGISFHSNMKDSIEG
FHYGVTQKKAGYHGAMDQGVISERGFNHMLDCVIAMKEVLGDKVSLALDCGPGWMLPDAIKFARAVEKYNLMWLEDMLTG
DYVPWVNPQAYRELTTSTSTPIHTGEQIYLRHNFKELIETQAVRVIGPDPADIGGIAELKWVAEHAYMHSILMAPHGTAN
GLLGLGALINVCATLPANYVAFEYPSASDPWWEDLVIGLPAQIVRDSMVDLLEAPGLGLDIDAEAARKYLGEEDAGFFD
>Mature_399_residues
MKITDLRCAVIGKHPIVRIVTDEGLHGLGEVEFTKTYLKPFVLHFREALIGEDPTDVERVMLKIRQRGSFKPYGAAVSAI
EHALWDIAGKAAGVPVYKLLGGKVRDKVRVYNGSIRRKRAGDRPEDYAADVKWMMEQPQNFFMVKQGISFHSNMKDSIEG
FHYGVTQKKAGYHGAMDQGVISERGFNHMLDCVIAMKEVLGDKVSLALDCGPGWMLPDAIKFARAVEKYNLMWLEDMLTG
DYVPWVNPQAYRELTTSTSTPIHTGEQIYLRHNFKELIETQAVRVIGPDPADIGGIAELKWVAEHAYMHSILMAPHGTAN
GLLGLGALINVCATLPANYVAFEYPSASDPWWEDLVIGLPAQIVRDSMVDLLEAPGLGLDIDAEAARKYLGEEDAGFFD

Specific function: Catalyzes the dehydration of D-galactonate to 2-keto-3- deoxy-D-galactonate [H]

COG id: COG4948

COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family. GalD subfamily [H]

Homologues:

Organism=Escherichia coli, GI48994953, Length=395, Percent_Identity=25.0632911392405, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018110
- InterPro:   IPR013342
- InterPro:   IPR013341
- InterPro:   IPR001354 [H]

Pfam domain/function: PF01188 MR_MLE; PF02746 MR_MLE_N [H]

EC number: =4.2.1.6 [H]

Molecular weight: Translated: 44335; Mature: 44335

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS00908 MR_MLE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITDLRCAVIGKHPIVRIVTDEGLHGLGEVEFTKTYLKPFVLHFREALIGEDPTDVERV
CCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
MLKIRQRGSFKPYGAAVSAIEHALWDIAGKAAGVPVYKLLGGKVRDKVRVYNGSIRRKRA
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHEEECCCCHHHHCC
GDRPEDYAADVKWMMEQPQNFFMVKQGISFHSNMKDSIEGFHYGVTQKKAGYHGAMDQGV
CCCCHHHHHHHHHHHHCCCCEEEECCCCCHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
ISERGFNHMLDCVIAMKEVLGDKVSLALDCGPGWMLPDAIKFARAVEKYNLMWLEDMLTG
HHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCHHHHHHHHCC
DYVPWVNPQAYRELTTSTSTPIHTGEQIYLRHNFKELIETQAVRVIGPDPADIGGIAELK
CCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHCCEEEECCCCCCCCCHHHHH
WVAEHAYMHSILMAPHGTANGLLGLGALINVCATLPANYVAFEYPSASDPWWEDLVIGLP
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHCCC
AQIVRDSMVDLLEAPGLGLDIDAEAARKYLGEEDAGFFD
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKITDLRCAVIGKHPIVRIVTDEGLHGLGEVEFTKTYLKPFVLHFREALIGEDPTDVERV
CCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
MLKIRQRGSFKPYGAAVSAIEHALWDIAGKAAGVPVYKLLGGKVRDKVRVYNGSIRRKRA
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHEEECCCCHHHHCC
GDRPEDYAADVKWMMEQPQNFFMVKQGISFHSNMKDSIEGFHYGVTQKKAGYHGAMDQGV
CCCCHHHHHHHHHHHHCCCCEEEECCCCCHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
ISERGFNHMLDCVIAMKEVLGDKVSLALDCGPGWMLPDAIKFARAVEKYNLMWLEDMLTG
HHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCHHHHHHHHCC
DYVPWVNPQAYRELTTSTSTPIHTGEQIYLRHNFKELIETQAVRVIGPDPADIGGIAELK
CCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHCCEEEECCCCCCCCCHHHHH
WVAEHAYMHSILMAPHGTANGLLGLGALINVCATLPANYVAFEYPSASDPWWEDLVIGLP
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHCCC
AQIVRDSMVDLLEAPGLGLDIDAEAARKYLGEEDAGFFD
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA