| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is rbsK [C]
Identifier: 13472111
GI number: 13472111
Start: 1858880
End: 1859692
Strand: Direct
Name: rbsK [C]
Synonym: mlr2302
Alternate gene names: 13472111
Gene position: 1858880-1859692 (Clockwise)
Preceding gene: 13472107
Following gene: 13472112
Centisome position: 26.42
GC content: 64.33
Gene sequence:
>813_bases ATGAGCACAGTCATCGTTGTCGGCCACGTTAATCACGACCAGGTCTGGTCGCTGTCAGCGCCCCTCGCCTCGGGCTCGCG CCTCACCTATTCCGATCGTGTTGTCAGGCTTGGCGGCGGCGGCTTTCACACCGGCACCCAGCTGGCGAAGCTCGGCAACG ATGTCCGGCTGATCAGCAATCTGATGGACGACGACCATGGCCGGGCGGCACTCGCCAAGTTGCAGGCGAGCGGCATCGAT ACCGGCTACGTCACCATGTGGACCGGCGAAACCCGGTTCACCGAAATCCTGCTTGAGCCGAATGGCGAGCGCACAATTTT GAACCCCGGCGGCCAGTTGCGCCCTCCCTTCGCCGCACCGGAGCCTGTCAGCGGCGACGCCGCCTATCTCAACGCCCTGG TGCTCGACGATGGTCTCGTTGCCTCGCTGCGGACGATCCCGCTTGTCATCTCGCAGTTTCCGTTGCGCAGCCCATCGCAC CGCCCGGCCGACATCGTCATCGGATCGCGCGCCGACTTTCCCGGCGAGGACGTGCAAGGGATCTGGGAGCGAGCGTCAAG GATTGCCGGGCCCCGCCTGAGGACGCTGGTGCTGACCGATGGAATGCGGCCGATCTCGCTCTATGACGGCAAGGCGCTCA ATCATGTCACGCCGCTGAAGCAGGTCTCAGTGCCCGACACGATCGGCGCCGGCGACTGTTTCACCGGGATCTTCCTGCAC GGCCTGCTGCAGGGGCTAATCCCTGAGCTTTCCGCTGAACAGGCAAGCCAGCAAACCGCCGAATGGCTGTCGGAACGATC ACGTACCGGCTGA
Upstream 100 bases:
>100_bases CCCTGCTGTCCCTGATCCCGGTCCTGGTGCTATGCCTGCCCAAGCAGCGCTTCGTCGTCGATGCGCTGGGCGACAAGTTG AAGGCCGAAAGCAAGGGATC
Downstream 100 bases:
>100_bases ATTAGGGGCTCCGGCAAGGCCGGCTTTCATGAAAATGTCATAAAAATCAAATGGAAACCGACATTCGAGTGAACTAGAAA ACATGTCCTGGAGAGATCGT
Product: carbohydrate kinase
Products: ADP; H+; alpha-D-Ribose 5-phosphate [C]
Alternate protein names: Carbohydrate Kinase; Carbohydrate Kinase PfkB Family; Site-Specific DNA-Methyltransferase; PfkB Family Carbohydrate Kinase; PfkB Domain Protein; Carbohydrate Kinase PfkB
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MSTVIVVGHVNHDQVWSLSAPLASGSRLTYSDRVVRLGGGGFHTGTQLAKLGNDVRLISNLMDDDHGRAALAKLQASGID TGYVTMWTGETRFTEILLEPNGERTILNPGGQLRPPFAAPEPVSGDAAYLNALVLDDGLVASLRTIPLVISQFPLRSPSH RPADIVIGSRADFPGEDVQGIWERASRIAGPRLRTLVLTDGMRPISLYDGKALNHVTPLKQVSVPDTIGAGDCFTGIFLH GLLQGLIPELSAEQASQQTAEWLSERSRTG
Sequences:
>Translated_270_residues MSTVIVVGHVNHDQVWSLSAPLASGSRLTYSDRVVRLGGGGFHTGTQLAKLGNDVRLISNLMDDDHGRAALAKLQASGID TGYVTMWTGETRFTEILLEPNGERTILNPGGQLRPPFAAPEPVSGDAAYLNALVLDDGLVASLRTIPLVISQFPLRSPSH RPADIVIGSRADFPGEDVQGIWERASRIAGPRLRTLVLTDGMRPISLYDGKALNHVTPLKQVSVPDTIGAGDCFTGIFLH GLLQGLIPELSAEQASQQTAEWLSERSRTG >Mature_269_residues STVIVVGHVNHDQVWSLSAPLASGSRLTYSDRVVRLGGGGFHTGTQLAKLGNDVRLISNLMDDDHGRAALAKLQASGIDT GYVTMWTGETRFTEILLEPNGERTILNPGGQLRPPFAAPEPVSGDAAYLNALVLDDGLVASLRTIPLVISQFPLRSPSHR PADIVIGSRADFPGEDVQGIWERASRIAGPRLRTLVLTDGMRPISLYDGKALNHVTPLKQVSVPDTIGAGDCFTGIFLHG LLQGLIPELSAEQASQQTAEWLSERSRTG
Specific function: Ribose metabolism; first step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.15 [C]
Molecular weight: Translated: 28932; Mature: 28801
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVIVVGHVNHDQVWSLSAPLASGSRLTYSDRVVRLGGGGFHTGTQLAKLGNDVRLISN CCEEEEEEECCCCCEEEECCCCCCCCEEEECCCEEEECCCCCCHHHHHHHHCCHHHHHHH LMDDDHGRAALAKLQASGIDTGYVTMWTGETRFTEILLEPNGERTILNPGGQLRPPFAAP HHCCCCCHHHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCCCEEEECCCCCCCCCCCCC EPVSGDAAYLNALVLDDGLVASLRTIPLVISQFPLRSPSHRPADIVIGSRADFPGEDVQG CCCCCCHHHHEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHH IWERASRIAGPRLRTLVLTDGMRPISLYDGKALNHVTPLKQVSVPDTIGAGDCFTGIFLH HHHHHHHHCCCCEEEEEEECCCCEEEECCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHH GLLQGLIPELSAEQASQQTAEWLSERSRTG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure STVIVVGHVNHDQVWSLSAPLASGSRLTYSDRVVRLGGGGFHTGTQLAKLGNDVRLISN CEEEEEEECCCCCEEEECCCCCCCCEEEECCCEEEECCCCCCHHHHHHHHCCHHHHHHH LMDDDHGRAALAKLQASGIDTGYVTMWTGETRFTEILLEPNGERTILNPGGQLRPPFAAP HHCCCCCHHHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCCCEEEECCCCCCCCCCCCC EPVSGDAAYLNALVLDDGLVASLRTIPLVISQFPLRSPSHRPADIVIGSRADFPGEDVQG CCCCCCHHHHEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHH IWERASRIAGPRLRTLVLTDGMRPISLYDGKALNHVTPLKQVSVPDTIGAGDCFTGIFLH HHHHHHHHCCCCEEEEEEECCCCEEEECCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHH GLLQGLIPELSAEQASQQTAEWLSERSRTG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; D-Ribose [C]
Specific reaction: ATP + D-Ribose --> ADP + H+ + alpha-D-Ribose 5-phosphate [C]
General reaction: Phospho group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA