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The map label for this gene is pdtaS [H]

Identifier: 13472110

GI number: 13472110

Start: 1857441

End: 1858481

Strand: Reverse

Name: pdtaS [H]

Synonym: mll2301

Alternate gene names: 13472110

Gene position: 1858481-1857441 (Counterclockwise)

Preceding gene: 13472114

Following gene: 13472109

Centisome position: 26.41

GC content: 59.46

Gene sequence:

>1041_bases
ATGGCATCCGTTTCAGCATCCCATCTGGAAGCCGCGAGCACGCTCGCAGTGGTCGTTTCATCGAACGAGCCGCTTCTGTT
CCTGACCGATGATCTCAGGGTCATTGTTGTCAGTGCCTCGTTTTGCCGGATCTTTCAGATCGATCCAGCAACGGTTTCAG
GCAAATTGCTCTCGGAAATCGGCACAGGCGAATGGGACATGCCGAAGCTGAACTCATTGCTCAAGGCAACCGCCGCCGGC
AGCGCCAAGATCGAGGCCTATGAGATCGACCTGAAGCGGGCGGGCCAGAAGACCCGCCAGCTGGTCGTGAACGCGCGTGT
GCTCGAAGACGGCGATCATGACCGAATTCGCCTTCTGGTGGCCGTAGCCGACGTCACGGATGCTCGGGCGGACGCCCGTC
AAAAGGACGATCTCATTCGCGACAAGGCAATCCTGATGCAGGAAGTGCAACACCGGGTCGCCAACAGCTTGCAGATCATC
GCGAGCGTGCTGATGCAGAGCGCGCGCAGGGTCCAGTCCGAAGAGACTCGCGGCCATCTGCATGACGCCCACAACAGGGT
CATGTCGATCGCGGCCGTGCAGCGGCACCTCGCCCAGTCCGGCGTGGAGAACGTTTCGCTGCGGACCTATTTTACGCAGT
TAAGTGAAAGCCTTGGCGCGTCGATGATCTCCGACAAGGACCGGCTTTCAATCGTCGTTTCCGTCGACGACAGCGTCGTG
AAGTCGGACATTTCGATCAGCTTGGGGCTGATCGTCACCGAACTGGTGATCAATGCACTGAAGCATGCGTTTCCGCAGGA
GCGGTCCGGCAAGATCTCGGTCGACTACCGTTCGCACGGGCAGGATTGGACCCTGTCAGTTCGCGATGACGGGATCGGCA
TGGGCGACAGTGCCGCAAAGGCCGGGCTCGGTACCGGTATCGTCGAGGCGCTTGCCAGGAACTTGCAAAGTGACATCAGC
GTGACCGATGCAAATCCCGGAACTCTCGTATCTGTTAGGCACCTTGCCGACGTCATCGACAGTGTACCGGCGGCAGCATA
G

Upstream 100 bases:

>100_bases
AAGGTGGCTCATGTTTTTCGGCCGGGTATGAATTCCGGTCGGCGTTCCTGCCGAGTGATGGCTCGCTTCGCGAGCTTTCG
GCCCTTGAGGGCCTTTTTTC

Downstream 100 bases:

>100_bases
GCAGATGACCACACCAAAATCCGCTGACGCGGGGCAACCATTGCCCAATGCTAAACTTGGTCCCGCGCACGCCGGAGACA
TGACGGCAAACCGCAAGGCC

Product: sensory transduction regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MASVSASHLEAASTLAVVVSSNEPLLFLTDDLRVIVVSASFCRIFQIDPATVSGKLLSEIGTGEWDMPKLNSLLKATAAG
SAKIEAYEIDLKRAGQKTRQLVVNARVLEDGDHDRIRLLVAVADVTDARADARQKDDLIRDKAILMQEVQHRVANSLQII
ASVLMQSARRVQSEETRGHLHDAHNRVMSIAAVQRHLAQSGVENVSLRTYFTQLSESLGASMISDKDRLSIVVSVDDSVV
KSDISISLGLIVTELVINALKHAFPQERSGKISVDYRSHGQDWTLSVRDDGIGMGDSAAKAGLGTGIVEALARNLQSDIS
VTDANPGTLVSVRHLADVIDSVPAAA

Sequences:

>Translated_346_residues
MASVSASHLEAASTLAVVVSSNEPLLFLTDDLRVIVVSASFCRIFQIDPATVSGKLLSEIGTGEWDMPKLNSLLKATAAG
SAKIEAYEIDLKRAGQKTRQLVVNARVLEDGDHDRIRLLVAVADVTDARADARQKDDLIRDKAILMQEVQHRVANSLQII
ASVLMQSARRVQSEETRGHLHDAHNRVMSIAAVQRHLAQSGVENVSLRTYFTQLSESLGASMISDKDRLSIVVSVDDSVV
KSDISISLGLIVTELVINALKHAFPQERSGKISVDYRSHGQDWTLSVRDDGIGMGDSAAKAGLGTGIVEALARNLQSDIS
VTDANPGTLVSVRHLADVIDSVPAAA
>Mature_345_residues
ASVSASHLEAASTLAVVVSSNEPLLFLTDDLRVIVVSASFCRIFQIDPATVSGKLLSEIGTGEWDMPKLNSLLKATAAGS
AKIEAYEIDLKRAGQKTRQLVVNARVLEDGDHDRIRLLVAVADVTDARADARQKDDLIRDKAILMQEVQHRVANSLQIIA
SVLMQSARRVQSEETRGHLHDAHNRVMSIAAVQRHLAQSGVENVSLRTYFTQLSESLGASMISDKDRLSIVVSVDDSVVK
SDISISLGLIVTELVINALKHAFPQERSGKISVDYRSHGQDWTLSVRDDGIGMGDSAAKAGLGTGIVEALARNLQSDISV
TDANPGTLVSVRHLADVIDSVPAAA

Specific function: Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR [H]

COG id: COG3920

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR022066
- InterPro:   IPR011495
- InterPro:   IPR005467 [H]

Pfam domain/function: PF12282 H_kinase_N; PF02518 HATPase_c; PF07568 HisKA_2 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 37171; Mature: 37039

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASVSASHLEAASTLAVVVSSNEPLLFLTDDLRVIVVSASFCRIFQIDPATVSGKLLSEI
CCCCCCHHHHHHCEEEEEEECCCCEEEEECCCEEEEEEECCEEEEEECCCHHHHHHHHHC
GTGEWDMPKLNSLLKATAAGSAKIEAYEIDLKRAGQKTRQLVVNARVLEDGDHDRIRLLV
CCCCCCCHHHHHHHHHHCCCCCEEEEEEECHHHCCHHHHHHHHHHHEECCCCCCEEEEEE
AVADVTDARADARQKDDLIRDKAILMQEVQHRVANSLQIIASVLMQSARRVQSEETRGHL
EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HDAHNRVMSIAAVQRHLAQSGVENVSLRTYFTQLSESLGASMISDKDRLSIVVSVDDSVV
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHCCCCCCEEEEEEECHHHH
KSDISISLGLIVTELVINALKHAFPQERSGKISVDYRSHGQDWTLSVRDDGIGMGDSAAK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCHHHH
AGLGTGIVEALARNLQSDISVTDANPGTLVSVRHLADVIDSVPAAA
HCCCHHHHHHHHHHHHHCCEEECCCCCCEEHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ASVSASHLEAASTLAVVVSSNEPLLFLTDDLRVIVVSASFCRIFQIDPATVSGKLLSEI
CCCCCHHHHHHCEEEEEEECCCCEEEEECCCEEEEEEECCEEEEEECCCHHHHHHHHHC
GTGEWDMPKLNSLLKATAAGSAKIEAYEIDLKRAGQKTRQLVVNARVLEDGDHDRIRLLV
CCCCCCCHHHHHHHHHHCCCCCEEEEEEECHHHCCHHHHHHHHHHHEECCCCCCEEEEEE
AVADVTDARADARQKDDLIRDKAILMQEVQHRVANSLQIIASVLMQSARRVQSEETRGHL
EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HDAHNRVMSIAAVQRHLAQSGVENVSLRTYFTQLSESLGASMISDKDRLSIVVSVDDSVV
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHCCCCCCEEEEEEECHHHH
KSDISISLGLIVTELVINALKHAFPQERSGKISVDYRSHGQDWTLSVRDDGIGMGDSAAK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCHHHH
AGLGTGIVEALARNLQSDISVTDANPGTLVSVRHLADVIDSVPAAA
HCCCHHHHHHHHHHHHHCCEEECCCCCCEEHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]