| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472026
Identifier: 13472026
GI number: 13472026
Start: 1771737
End: 1773263
Strand: Direct
Name: 13472026
Synonym: mlr2187
Alternate gene names: NA
Gene position: 1771737-1773263 (Clockwise)
Preceding gene: 13472024
Following gene: 13472028
Centisome position: 25.18
GC content: 62.08
Gene sequence:
>1527_bases ATGAAAACACTATCTCTGACGTTGGCTGCGGGCACGCTGACGGCGGCATTGGCTGGCGCGCTTTCCAGCGCCATCGCCGC ACCCTACAAGCACGTCCTGCTCATCAGCGTCGACGGGCTTCATGCGCTCGATCTGGCAAACTATGTCGCCGCAAATCCGA AAAGCTCGCTCGCCGCGCTCGCCGATACCGGGATTTTCTATCCGAATGCGCTCGCCAGCGCCCCGTCCGACTCGTTTCCT GGCCTTGTGGCACAGGTCACCGGCGGCACACCCAAATCGACGGGCGTATTCTACGACGACAGCTACGACCGCACTTATTT CGCGCCGGCCTCGGATTGCAAGGGCGAGCCGGGCGCCGAGGTGGCTTTCGCCGAGAACATCGACGTCGATTCGACGCGCC TTGATGGTGGCGGCAAGCCAGGCGATTACCGCAGCCAGATCGACCCGGCAAAGCTGCCGATGACGCTGATCAACGGCAAA TGCTCGGTGGTCTATCCGCATGATTTCGTGCGGGTCAACAACGTCTTCGAAATCGTGAAAGCGCATGGCGGCCGCACGGC CTGGTCCGACAAGCACCCGGCCTATGAATGGCTGAACGGACCTTCGGGCAAAGGCGTCGACGACCTCTACGCATTGGAAC AGGACAGCTTGATTCCCGGCACCAAGGTCAAGACGACGGGCAGCTTCAAGGCCGAGCGCGACTTCGATGAAGCGCGGGTC CAGGCGGTGATCAACGAGATCAAAGGCCTCGACAGCACCGGCTCGCATCCCGCCGCGGTTCCCACGCTTTTCGGCATGAA TTTCCAGGCGGTGAGCGTGGGCCAGAAGCTTCCTAAGGCCGGTCCTGGCGATGAGGCTGGTCTGGTGGGCGGTTATCTGG ATGCCAGCGGCACGCCTGGCAACGGTCTCGCCGGGCAGCTCGCCTATGTAGATGGCGCTGTCGGCGAACTGATGGCCGCA CTCAAGGACAACAAACTCGCCAATTCGACCCTGATCATACTTGCCTCGAAGCATGGCCAGTCGCCCATCGACCCGGCGTC GTTCCAGCCACTGGACGACGATCCCTATACGAAGACACCGGGCTATGCCTTCCACATCGCCGACGACGCCGCGCTGATCT GGCTCAAACCGCAAGACAGGGTCAGAAACCTCGCGGCCGCGCAGGATTATCTCGAGAAATCGAGCAAGGCTGAAGGCATC GCCCAGATCCAGCCGCCGAATGCCCTTGCTCTCGCTTATCAGGATCCGGCCACCGACAGCCGTACGCCGGACTTCATAGC CACGGTCAATCCGGGCGTGGTCTACACATCCGGCTCGAAGATTGCCGAGCACGGTGGCGCCAATGTGAACGATCGCAACG TGGCGCTTCTCATCAGCGGTCCTTCGCTCAAGCCGAGGTCGGTGCCAGCTCTGGTGCAGACGACGCAGGTAGCTCCCACG ATCCTGCGGGCTCTTGGCTATGACGCGAACGAACTCCAGGCTGTGAAGCTCGAAGGCACCCAGGAGCTGCCGGCGGCACC GTTCTAG
Upstream 100 bases:
>100_bases TACCAATCCGTAAGGTCCTTTGCCGACGAGTTTCACGAACCTGTCATGTCCACTCGCCTATCCTTGATCCATCGCGGGCT GCGAGACGAGGGACACTCCT
Downstream 100 bases:
>100_bases GCGTTCAGCTCCGCAGCAACAGCCTGACGGATTGGCTGACAGAATGCGCGATTTCGACCTCGCGGCGCTGACGCTTGCGT ATTTGCGCCCGTTTGTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 508; Mature: 508
Protein sequence:
>508_residues MKTLSLTLAAGTLTAALAGALSSAIAAPYKHVLLISVDGLHALDLANYVAANPKSSLAALADTGIFYPNALASAPSDSFP GLVAQVTGGTPKSTGVFYDDSYDRTYFAPASDCKGEPGAEVAFAENIDVDSTRLDGGGKPGDYRSQIDPAKLPMTLINGK CSVVYPHDFVRVNNVFEIVKAHGGRTAWSDKHPAYEWLNGPSGKGVDDLYALEQDSLIPGTKVKTTGSFKAERDFDEARV QAVINEIKGLDSTGSHPAAVPTLFGMNFQAVSVGQKLPKAGPGDEAGLVGGYLDASGTPGNGLAGQLAYVDGAVGELMAA LKDNKLANSTLIILASKHGQSPIDPASFQPLDDDPYTKTPGYAFHIADDAALIWLKPQDRVRNLAAAQDYLEKSSKAEGI AQIQPPNALALAYQDPATDSRTPDFIATVNPGVVYTSGSKIAEHGGANVNDRNVALLISGPSLKPRSVPALVQTTQVAPT ILRALGYDANELQAVKLEGTQELPAAPF
Sequences:
>Translated_508_residues MKTLSLTLAAGTLTAALAGALSSAIAAPYKHVLLISVDGLHALDLANYVAANPKSSLAALADTGIFYPNALASAPSDSFP GLVAQVTGGTPKSTGVFYDDSYDRTYFAPASDCKGEPGAEVAFAENIDVDSTRLDGGGKPGDYRSQIDPAKLPMTLINGK CSVVYPHDFVRVNNVFEIVKAHGGRTAWSDKHPAYEWLNGPSGKGVDDLYALEQDSLIPGTKVKTTGSFKAERDFDEARV QAVINEIKGLDSTGSHPAAVPTLFGMNFQAVSVGQKLPKAGPGDEAGLVGGYLDASGTPGNGLAGQLAYVDGAVGELMAA LKDNKLANSTLIILASKHGQSPIDPASFQPLDDDPYTKTPGYAFHIADDAALIWLKPQDRVRNLAAAQDYLEKSSKAEGI AQIQPPNALALAYQDPATDSRTPDFIATVNPGVVYTSGSKIAEHGGANVNDRNVALLISGPSLKPRSVPALVQTTQVAPT ILRALGYDANELQAVKLEGTQELPAAPF >Mature_508_residues MKTLSLTLAAGTLTAALAGALSSAIAAPYKHVLLISVDGLHALDLANYVAANPKSSLAALADTGIFYPNALASAPSDSFP GLVAQVTGGTPKSTGVFYDDSYDRTYFAPASDCKGEPGAEVAFAENIDVDSTRLDGGGKPGDYRSQIDPAKLPMTLINGK CSVVYPHDFVRVNNVFEIVKAHGGRTAWSDKHPAYEWLNGPSGKGVDDLYALEQDSLIPGTKVKTTGSFKAERDFDEARV QAVINEIKGLDSTGSHPAAVPTLFGMNFQAVSVGQKLPKAGPGDEAGLVGGYLDASGTPGNGLAGQLAYVDGAVGELMAA LKDNKLANSTLIILASKHGQSPIDPASFQPLDDDPYTKTPGYAFHIADDAALIWLKPQDRVRNLAAAQDYLEKSSKAEGI AQIQPPNALALAYQDPATDSRTPDFIATVNPGVVYTSGSKIAEHGGANVNDRNVALLISGPSLKPRSVPALVQTTQVAPT ILRALGYDANELQAVKLEGTQELPAAPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53041; Mature: 53041
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLSLTLAAGTLTAALAGALSSAIAAPYKHVLLISVDGLHALDLANYVAANPKSSLAAL CCEEEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHCCCCHHHHHH ADTGIFYPNALASAPSDSFPGLVAQVTGGTPKSTGVFYDDSYDRTYFAPASDCKGEPGAE HHCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCEEEECCCCCCEEECCCCCCCCCCCCE VAFAENIDVDSTRLDGGGKPGDYRSQIDPAKLPMTLINGKCSVVYPHDFVRVNNVFEIVK EEEECCCCCCCEECCCCCCCCCCCCCCCHHHCCEEEECCEEEEECCHHHEEHHHHHHHHH AHGGRTAWSDKHPAYEWLNGPSGKGVDDLYALEQDSLIPGTKVKTTGSFKAERDFDEARV HCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHHH QAVINEIKGLDSTGSHPAAVPTLFGMNFQAVSVGQKLPKAGPGDEAGLVGGYLDASGTPG HHHHHHHHCCCCCCCCCCCCHHHHCCCEEEEHHHHHCCCCCCCCCCCEEEEEECCCCCCC NGLAGQLAYVDGAVGELMAALKDNKLANSTLIILASKHGQSPIDPASFQPLDDDPYTKTP CCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC GYAFHIADDAALIWLKPQDRVRNLAAAQDYLEKSSKAEGIAQIQPPNALALAYQDPATDS CEEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCC RTPDFIATVNPGVVYTSGSKIAEHGGANVNDRNVALLISGPSLKPRSVPALVQTTQVAPT CCCCEEEECCCCEEEECCCHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH ILRALGYDANELQAVKLEGTQELPAAPF HHHHHCCCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure MKTLSLTLAAGTLTAALAGALSSAIAAPYKHVLLISVDGLHALDLANYVAANPKSSLAAL CCEEEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHCCCCHHHHHH ADTGIFYPNALASAPSDSFPGLVAQVTGGTPKSTGVFYDDSYDRTYFAPASDCKGEPGAE HHCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCEEEECCCCCCEEECCCCCCCCCCCCE VAFAENIDVDSTRLDGGGKPGDYRSQIDPAKLPMTLINGKCSVVYPHDFVRVNNVFEIVK EEEECCCCCCCEECCCCCCCCCCCCCCCHHHCCEEEECCEEEEECCHHHEEHHHHHHHHH AHGGRTAWSDKHPAYEWLNGPSGKGVDDLYALEQDSLIPGTKVKTTGSFKAERDFDEARV HCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHHH QAVINEIKGLDSTGSHPAAVPTLFGMNFQAVSVGQKLPKAGPGDEAGLVGGYLDASGTPG HHHHHHHHCCCCCCCCCCCCHHHHCCCEEEEHHHHHCCCCCCCCCCCEEEEEECCCCCCC NGLAGQLAYVDGAVGELMAALKDNKLANSTLIILASKHGQSPIDPASFQPLDDDPYTKTP CCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC GYAFHIADDAALIWLKPQDRVRNLAAAQDYLEKSSKAEGIAQIQPPNALALAYQDPATDS CEEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCC RTPDFIATVNPGVVYTSGSKIAEHGGANVNDRNVALLISGPSLKPRSVPALVQTTQVAPT CCCCEEEECCCCEEEECCCHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH ILRALGYDANELQAVKLEGTQELPAAPF HHHHHCCCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA