| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472016
Identifier: 13472016
GI number: 13472016
Start: 1763553
End: 1764041
Strand: Direct
Name: 13472016
Synonym: mlr2174
Alternate gene names: NA
Gene position: 1763553-1764041 (Clockwise)
Preceding gene: 13472015
Following gene: 13472017
Centisome position: 25.06
GC content: 67.69
Gene sequence:
>489_bases ATGAGCGCGCCCGCCGACCGCAGCTTTGCCATCGAGCGGATCTTCAACGCGCCGGTCGAACGCGTCTTCCGGCTGTGGAC CGATCCGCTTCTGGTGGCGCAGTGGTGGGGCATCAGGGACTGCACCATTCCCCTTTGCGTGCTCGACGTGCGCGTCGGCG GCCGCTGGCGCATCGACATGCTGACCGCGGGCGGCGCGCTCTATCGCAACCAGGGCAGTTACCTCGAAGTCGTCGAGAAC GTCAGGCTGAGCTACCGCGACGAACCGGATCCTGAAATCCGCGAATGGGCCGGCAAGCCGCCGGGCCGGAGCCGGCACAC AGTGAGCTTCACGGCCAGCGGCGCGCGCACCCATGTCCATTTCGAGGTGACGTTGGCGACCGCCGCCGACCGCGAACGCC TGCTGGCGCTCGGCATGCGCGGCGGCTGGATGCAGAGCTTCGACCGGCTGGAACAGTTGATAGGCAAGGGAGCCGACCAT GCTGGCTGA
Upstream 100 bases:
>100_bases TCCGCGACATCGACCGTTGGCTCGATGACTACCGCAAGCTGTGGGAAGGCCGCTTCGACCGCATGGAGGACCTGTTGCGG CGCGGCGCGGACAGGCCGGA
Downstream 100 bases:
>100_bases GAACGCCAAGCCGACCACGCAAGCCGTGCTGTCGCGGGATGGAACAGCGATCGCCTGCGAACGGCGCGGCCAGGGCCATC CGCTCATCCTCGTCGACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MSAPADRSFAIERIFNAPVERVFRLWTDPLLVAQWWGIRDCTIPLCVLDVRVGGRWRIDMLTAGGALYRNQGSYLEVVEN VRLSYRDEPDPEIREWAGKPPGRSRHTVSFTASGARTHVHFEVTLATAADRERLLALGMRGGWMQSFDRLEQLIGKGADH AG
Sequences:
>Translated_162_residues MSAPADRSFAIERIFNAPVERVFRLWTDPLLVAQWWGIRDCTIPLCVLDVRVGGRWRIDMLTAGGALYRNQGSYLEVVEN VRLSYRDEPDPEIREWAGKPPGRSRHTVSFTASGARTHVHFEVTLATAADRERLLALGMRGGWMQSFDRLEQLIGKGADH AG >Mature_161_residues SAPADRSFAIERIFNAPVERVFRLWTDPLLVAQWWGIRDCTIPLCVLDVRVGGRWRIDMLTAGGALYRNQGSYLEVVENV RLSYRDEPDPEIREWAGKPPGRSRHTVSFTASGARTHVHFEVTLATAADRERLLALGMRGGWMQSFDRLEQLIGKGADHA G
Specific function: Unknown
COG id: COG3832
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18263; Mature: 18132
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPADRSFAIERIFNAPVERVFRLWTDPLLVAQWWGIRDCTIPLCVLDVRVGGRWRIDM CCCCCCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHCCCCCCCEEEEEEEEEECCEEEEEE LTAGGALYRNQGSYLEVVENVRLSYRDEPDPEIREWAGKPPGRSRHTVSFTASGARTHVH EECCCEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCEEEEEEECCCEEEEE FEVTLATAADRERLLALGMRGGWMQSFDRLEQLIGKGADHAG EEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SAPADRSFAIERIFNAPVERVFRLWTDPLLVAQWWGIRDCTIPLCVLDVRVGGRWRIDM CCCCCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHCCCCCCCEEEEEEEEEECCEEEEEE LTAGGALYRNQGSYLEVVENVRLSYRDEPDPEIREWAGKPPGRSRHTVSFTASGARTHVH EECCCEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCEEEEEEECCCEEEEE FEVTLATAADRERLLALGMRGGWMQSFDRLEQLIGKGADHAG EEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA