| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471988
Identifier: 13471988
GI number: 13471988
Start: 1740396
End: 1741589
Strand: Direct
Name: 13471988
Synonym: mlr2141
Alternate gene names: NA
Gene position: 1740396-1741589 (Clockwise)
Preceding gene: 13471987
Following gene: 13471989
Centisome position: 24.74
GC content: 65.91
Gene sequence:
>1194_bases ATGATTTGGAATGTTCAGGACTGCCCGCTCAAAATTTCAAACCTGGATCACGGCCGGCGCGGGGACCATCGCGGCGCTGT TCGTCGCCGGCCTGATGGGCGCCTTCGGCGCCCTGCCCGCCCACGCCCCGCCGCAATTGCCGCTCGACACCGCCATCGAT GCCGGGCGCTGGCGCGTCCAGCCGCTGCGCGCCTATGTCAGCCACGCCAGGACATATGGCGTGCTGCTGAAGCCCGGCCA GAAGGCGCTGGTGCTGGTGGCCGACATGACCAACCGCACCGCGCAATCCGACAAGGCCTATTTCGATGTCTTCAAGCCGG ACGGCATCGCCCTGCCCGATCCCATGCCGATGATTGCGCTGACACGCGATGCGACACTGACGCCGGAACTGCATCCCGGC ATGACCGAGCGCATGGCCTATGTCTGGCCGCTGGCCGGCGACGCCGCTGTCCCGGCCAGCCTGAGCTTCGGCGTCACCGC CGAGATCTTCAAGCCGCGCGACAACCTCTATGGCATGCCCGGCTGGTTCAATCCCTACCGGCTCGGCACAATCACCTTGC CAATCGCCGACGTGCCGGGAACCGGCTCATGAGAATCCGCATCCTCGGCAATCTCGTCATCCTCTGCGCGACCGTGGCGC TGAGCTACGGCATGCAGGCGACGAAGCCGCATTATGCTGACCTCACCGCGCCGATCCCGGTCGACGGCGCCATGCACGAC AAGGTTCGCGCGCGCAGCTTCGATGTCCGGCTCGACAAGGTCGTCTTTGCCCGCCAGCTCAAGACCAACCAGTTCGGCCA GCAAAAGCTTTTGACCACCAGCGGCCTGTGGGCTGTGGTATCGACCAGCCTCACCGCCACCGCTGCCTCCACCACAGTCG CCGACGGCACCTGGCAAGGCCCGACAGGGCTGCGCTACCACCAGACGGAGCGGCTTGGCTACCGCCAGGACATGCCGCCG CATGGCGTCGATCCGGGCTTGGAGAAGAGCGGCCTGTTCGTGTTCGAAATACCACCCGACCAGATAAGCGGCGCCAGCCT GCTGGTCGCCGCGCGCCAGTTCGGCCCTCTCGACGCCCAGGCGCGCATCAGCCTCGATGGGATACCGACAAGCGCCGACG GCCAGCCCACGGATGTGCTGCCGGAATACGATTTGGATGCGCCGCAAGGCCAGACACTTCAGGGCAAGTCATGA
Upstream 100 bases:
>100_bases CTCGAAGCGGCCTGAAACCCGGCACACTGGACCAGCCATTTGCGGGTTCCATCCGCTGAATTTTCTTTCTAGATTGCGTC GGGGTGGCTCTTCGACGTGC
Downstream 100 bases:
>100_bases GCGCCGTTTCGACAGAGCCGGCGGCCGACCCGCAGGCCGAGAAAAAATGGCGGCGGCACAGCCTTGTGGCGCTTGCCATC CTGCTGCCGCTGGCGCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MIWNVQDCPLKISNLDHGRRGDHRGAVRRRPDGRLRRPARPRPAAIAARHRHRCRALARPAAARLCQPRQDIWRAAEARP EGAGAGGRHDQPHRAIRQGLFRCLQAGRHRPARSHADDCADTRCDTDAGTASRHDRAHGLCLAAGRRRRCPGQPELRRHR RDLQAARQPLWHARLVQSLPARHNHLANRRRAGNRLMRIRILGNLVILCATVALSYGMQATKPHYADLTAPIPVDGAMHD KVRARSFDVRLDKVVFARQLKTNQFGQQKLLTTSGLWAVVSTSLTATAASTTVADGTWQGPTGLRYHQTERLGYRQDMPP HGVDPGLEKSGLFVFEIPPDQISGASLLVAARQFGPLDAQARISLDGIPTSADGQPTDVLPEYDLDAPQGQTLQGKS
Sequences:
>Translated_397_residues MIWNVQDCPLKISNLDHGRRGDHRGAVRRRPDGRLRRPARPRPAAIAARHRHRCRALARPAAARLCQPRQDIWRAAEARP EGAGAGGRHDQPHRAIRQGLFRCLQAGRHRPARSHADDCADTRCDTDAGTASRHDRAHGLCLAAGRRRRCPGQPELRRHR RDLQAARQPLWHARLVQSLPARHNHLANRRRAGNRLMRIRILGNLVILCATVALSYGMQATKPHYADLTAPIPVDGAMHD KVRARSFDVRLDKVVFARQLKTNQFGQQKLLTTSGLWAVVSTSLTATAASTTVADGTWQGPTGLRYHQTERLGYRQDMPP HGVDPGLEKSGLFVFEIPPDQISGASLLVAARQFGPLDAQARISLDGIPTSADGQPTDVLPEYDLDAPQGQTLQGKS >Mature_397_residues MIWNVQDCPLKISNLDHGRRGDHRGAVRRRPDGRLRRPARPRPAAIAARHRHRCRALARPAAARLCQPRQDIWRAAEARP EGAGAGGRHDQPHRAIRQGLFRCLQAGRHRPARSHADDCADTRCDTDAGTASRHDRAHGLCLAAGRRRRCPGQPELRRHR RDLQAARQPLWHARLVQSLPARHNHLANRRRAGNRLMRIRILGNLVILCATVALSYGMQATKPHYADLTAPIPVDGAMHD KVRARSFDVRLDKVVFARQLKTNQFGQQKLLTTSGLWAVVSTSLTATAASTTVADGTWQGPTGLRYHQTERLGYRQDMPP HGVDPGLEKSGLFVFEIPPDQISGASLLVAARQFGPLDAQARISLDGIPTSADGQPTDVLPEYDLDAPQGQTLQGKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43919; Mature: 43919
Theoretical pI: Translated: 11.66; Mature: 11.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIWNVQDCPLKISNLDHGRRGDHRGAVRRRPDGRLRRPARPRPAAIAARHRHRCRALARP CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH AAARLCQPRQDIWRAAEARPEGAGAGGRHDQPHRAIRQGLFRCLQAGRHRPARSHADDCA HHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHH DTRCDTDAGTASRHDRAHGLCLAAGRRRRCPGQPELRRHRRDLQAARQPLWHARLVQSLP HCCCCCCCCCCCCCHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC ARHNHLANRRRAGNRLMRIRILGNLVILCATVALSYGMQATKPHYADLTAPIPVDGAMHD HHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH KVRARSFDVRLDKVVFARQLKTNQFGQQKLLTTSGLWAVVSTSLTATAASTTVADGTWQG HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHCCCEECCCCCCC PTGLRYHQTERLGYRQDMPPHGVDPGLEKSGLFVFEIPPDQISGASLLVAARQFGPLDAQ CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHEEEHHHCCCCCCC ARISLDGIPTSADGQPTDVLPEYDLDAPQGQTLQGKS EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIWNVQDCPLKISNLDHGRRGDHRGAVRRRPDGRLRRPARPRPAAIAARHRHRCRALARP CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH AAARLCQPRQDIWRAAEARPEGAGAGGRHDQPHRAIRQGLFRCLQAGRHRPARSHADDCA HHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHH DTRCDTDAGTASRHDRAHGLCLAAGRRRRCPGQPELRRHRRDLQAARQPLWHARLVQSLP HCCCCCCCCCCCCCHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC ARHNHLANRRRAGNRLMRIRILGNLVILCATVALSYGMQATKPHYADLTAPIPVDGAMHD HHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH KVRARSFDVRLDKVVFARQLKTNQFGQQKLLTTSGLWAVVSTSLTATAASTTVADGTWQG HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHCCCEECCCCCCC PTGLRYHQTERLGYRQDMPPHGVDPGLEKSGLFVFEIPPDQISGASLLVAARQFGPLDAQ CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHEEEHHHCCCCCCC ARISLDGIPTSADGQPTDVLPEYDLDAPQGQTLQGKS EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA