Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13471985

Identifier: 13471985

GI number: 13471985

Start: 1738705

End: 1739409

Strand: Direct

Name: 13471985

Synonym: mlr2136

Alternate gene names: NA

Gene position: 1738705-1739409 (Clockwise)

Preceding gene: 13471979

Following gene: 13471987

Centisome position: 24.71

GC content: 64.11

Gene sequence:

>705_bases
ATGGGTGCCATGGCCAAAACGGAACTATCGATCAAGGTCGGGGCGGCGATACGCCAGGCGCGCAAGCAGCGCGGCCTGGT
CATGCGCCACATTGCCGAGCACAACGACACCGATGTCGCCGCCGTCGGCAATTGGGAAACCGGCCGCAACCTGCCCAAGA
CCGAGAACCTGTTGAAGACCGCCGCCTTCCTGCGCGTCGACCCGGTGGCGCTGGGCAAAGGCGAGGTCGTCTTCCTCGAC
GATGCCGACGCGTTATCCGATGCCGAGATCGTCACCGATGCCGGCCCGATGCCCGCCGGCTCAATGGATATCGAGGTGCT
GGGTGCGGCGGTCGGCGGCGATGACGGCGACTTCACCTTCAACGGCGAGCCGGCCGGCTACGTCCAGCGCCCGCCGGGCG
TGCGCAACCTGCCGAAGGTGTTCGCGCTGCATGTGCTCTCCGACTCGATGGTGCCGCGCTACGAACCCGGCGACCTCATC
TATTGCGGCGGCCGCGACGCGATCCCCGGCGACCATGTGGTGATCGAGACGTTTCCGGAAGAAAATGAGAAGAACGGCAA
GGCCTTCGTCAAGAAACTGGTCAAGCGCACCGCGAGCGAGCTGGTGGTCGAGCAGTACAATCCGCCGAAGACGCTGACCT
TCAACCGCTACGCGATCAAGCATGTCTGGCGGGTCATTCCGCTGAAGGAATTGCTGGGATATTAG

Upstream 100 bases:

>100_bases
CCATGAAAGCTGGACAGGTTCTGCATGGCCAGATATAAGCATAACTCAAAAACATATGCAAGCCATTCTTTCATAGACGA
GAGCCGCTTTCATCGCTCAC

Downstream 100 bases:

>100_bases
AGCCCTTTTTTCCTTCTCCCTTGCGGGAGACGGAAAAACCAGCGTCGGCACCGCTCCAAAAACTCAAGCCCGCCTCGCCC
CCTCCACCAGCACCTCGCGC

Product: phage repressor protein C

Products: NA

Alternate protein names: Transcriptional Repressor

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MGAMAKTELSIKVGAAIRQARKQRGLVMRHIAEHNDTDVAAVGNWETGRNLPKTENLLKTAAFLRVDPVALGKGEVVFLD
DADALSDAEIVTDAGPMPAGSMDIEVLGAAVGGDDGDFTFNGEPAGYVQRPPGVRNLPKVFALHVLSDSMVPRYEPGDLI
YCGGRDAIPGDHVVIETFPEENEKNGKAFVKKLVKRTASELVVEQYNPPKTLTFNRYAIKHVWRVIPLKELLGY

Sequences:

>Translated_234_residues
MGAMAKTELSIKVGAAIRQARKQRGLVMRHIAEHNDTDVAAVGNWETGRNLPKTENLLKTAAFLRVDPVALGKGEVVFLD
DADALSDAEIVTDAGPMPAGSMDIEVLGAAVGGDDGDFTFNGEPAGYVQRPPGVRNLPKVFALHVLSDSMVPRYEPGDLI
YCGGRDAIPGDHVVIETFPEENEKNGKAFVKKLVKRTASELVVEQYNPPKTLTFNRYAIKHVWRVIPLKELLGY
>Mature_233_residues
GAMAKTELSIKVGAAIRQARKQRGLVMRHIAEHNDTDVAAVGNWETGRNLPKTENLLKTAAFLRVDPVALGKGEVVFLDD
ADALSDAEIVTDAGPMPAGSMDIEVLGAAVGGDDGDFTFNGEPAGYVQRPPGVRNLPKVFALHVLSDSMVPRYEPGDLIY
CGGRDAIPGDHVVIETFPEENEKNGKAFVKKLVKRTASELVVEQYNPPKTLTFNRYAIKHVWRVIPLKELLGY

Specific function: Unknown

COG id: COG2932

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25463; Mature: 25332

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAMAKTELSIKVGAAIRQARKQRGLVMRHIAEHNDTDVAAVGNWETGRNLPKTENLLKT
CCCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHH
AAFLRVDPVALGKGEVVFLDDADALSDAEIVTDAGPMPAGSMDIEVLGAAVGGDDGDFTF
HHHHEECCEEECCCCEEEEECCCCCCCCCEEECCCCCCCCCCCEEEEEEEECCCCCCEEE
NGEPAGYVQRPPGVRNLPKVFALHVLSDSMVPRYEPGDLIYCGGRDAIPGDHVVIETFPE
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCC
ENEKNGKAFVKKLVKRTASELVVEQYNPPKTLTFNRYAIKHVWRVIPLKELLGY
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHCCHHHHHCC
>Mature Secondary Structure 
GAMAKTELSIKVGAAIRQARKQRGLVMRHIAEHNDTDVAAVGNWETGRNLPKTENLLKT
CCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHH
AAFLRVDPVALGKGEVVFLDDADALSDAEIVTDAGPMPAGSMDIEVLGAAVGGDDGDFTF
HHHHEECCEEECCCCEEEEECCCCCCCCCEEECCCCCCCCCCCEEEEEEEECCCCCCEEE
NGEPAGYVQRPPGVRNLPKVFALHVLSDSMVPRYEPGDLIYCGGRDAIPGDHVVIETFPE
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCC
ENEKNGKAFVKKLVKRTASELVVEQYNPPKTLTFNRYAIKHVWRVIPLKELLGY
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA