| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471985
Identifier: 13471985
GI number: 13471985
Start: 1738705
End: 1739409
Strand: Direct
Name: 13471985
Synonym: mlr2136
Alternate gene names: NA
Gene position: 1738705-1739409 (Clockwise)
Preceding gene: 13471979
Following gene: 13471987
Centisome position: 24.71
GC content: 64.11
Gene sequence:
>705_bases ATGGGTGCCATGGCCAAAACGGAACTATCGATCAAGGTCGGGGCGGCGATACGCCAGGCGCGCAAGCAGCGCGGCCTGGT CATGCGCCACATTGCCGAGCACAACGACACCGATGTCGCCGCCGTCGGCAATTGGGAAACCGGCCGCAACCTGCCCAAGA CCGAGAACCTGTTGAAGACCGCCGCCTTCCTGCGCGTCGACCCGGTGGCGCTGGGCAAAGGCGAGGTCGTCTTCCTCGAC GATGCCGACGCGTTATCCGATGCCGAGATCGTCACCGATGCCGGCCCGATGCCCGCCGGCTCAATGGATATCGAGGTGCT GGGTGCGGCGGTCGGCGGCGATGACGGCGACTTCACCTTCAACGGCGAGCCGGCCGGCTACGTCCAGCGCCCGCCGGGCG TGCGCAACCTGCCGAAGGTGTTCGCGCTGCATGTGCTCTCCGACTCGATGGTGCCGCGCTACGAACCCGGCGACCTCATC TATTGCGGCGGCCGCGACGCGATCCCCGGCGACCATGTGGTGATCGAGACGTTTCCGGAAGAAAATGAGAAGAACGGCAA GGCCTTCGTCAAGAAACTGGTCAAGCGCACCGCGAGCGAGCTGGTGGTCGAGCAGTACAATCCGCCGAAGACGCTGACCT TCAACCGCTACGCGATCAAGCATGTCTGGCGGGTCATTCCGCTGAAGGAATTGCTGGGATATTAG
Upstream 100 bases:
>100_bases CCATGAAAGCTGGACAGGTTCTGCATGGCCAGATATAAGCATAACTCAAAAACATATGCAAGCCATTCTTTCATAGACGA GAGCCGCTTTCATCGCTCAC
Downstream 100 bases:
>100_bases AGCCCTTTTTTCCTTCTCCCTTGCGGGAGACGGAAAAACCAGCGTCGGCACCGCTCCAAAAACTCAAGCCCGCCTCGCCC CCTCCACCAGCACCTCGCGC
Product: phage repressor protein C
Products: NA
Alternate protein names: Transcriptional Repressor
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MGAMAKTELSIKVGAAIRQARKQRGLVMRHIAEHNDTDVAAVGNWETGRNLPKTENLLKTAAFLRVDPVALGKGEVVFLD DADALSDAEIVTDAGPMPAGSMDIEVLGAAVGGDDGDFTFNGEPAGYVQRPPGVRNLPKVFALHVLSDSMVPRYEPGDLI YCGGRDAIPGDHVVIETFPEENEKNGKAFVKKLVKRTASELVVEQYNPPKTLTFNRYAIKHVWRVIPLKELLGY
Sequences:
>Translated_234_residues MGAMAKTELSIKVGAAIRQARKQRGLVMRHIAEHNDTDVAAVGNWETGRNLPKTENLLKTAAFLRVDPVALGKGEVVFLD DADALSDAEIVTDAGPMPAGSMDIEVLGAAVGGDDGDFTFNGEPAGYVQRPPGVRNLPKVFALHVLSDSMVPRYEPGDLI YCGGRDAIPGDHVVIETFPEENEKNGKAFVKKLVKRTASELVVEQYNPPKTLTFNRYAIKHVWRVIPLKELLGY >Mature_233_residues GAMAKTELSIKVGAAIRQARKQRGLVMRHIAEHNDTDVAAVGNWETGRNLPKTENLLKTAAFLRVDPVALGKGEVVFLDD ADALSDAEIVTDAGPMPAGSMDIEVLGAAVGGDDGDFTFNGEPAGYVQRPPGVRNLPKVFALHVLSDSMVPRYEPGDLIY CGGRDAIPGDHVVIETFPEENEKNGKAFVKKLVKRTASELVVEQYNPPKTLTFNRYAIKHVWRVIPLKELLGY
Specific function: Unknown
COG id: COG2932
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25463; Mature: 25332
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAMAKTELSIKVGAAIRQARKQRGLVMRHIAEHNDTDVAAVGNWETGRNLPKTENLLKT CCCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHH AAFLRVDPVALGKGEVVFLDDADALSDAEIVTDAGPMPAGSMDIEVLGAAVGGDDGDFTF HHHHEECCEEECCCCEEEEECCCCCCCCCEEECCCCCCCCCCCEEEEEEEECCCCCCEEE NGEPAGYVQRPPGVRNLPKVFALHVLSDSMVPRYEPGDLIYCGGRDAIPGDHVVIETFPE CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCC ENEKNGKAFVKKLVKRTASELVVEQYNPPKTLTFNRYAIKHVWRVIPLKELLGY CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHCCHHHHHCC >Mature Secondary Structure GAMAKTELSIKVGAAIRQARKQRGLVMRHIAEHNDTDVAAVGNWETGRNLPKTENLLKT CCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHH AAFLRVDPVALGKGEVVFLDDADALSDAEIVTDAGPMPAGSMDIEVLGAAVGGDDGDFTF HHHHEECCEEECCCCEEEEECCCCCCCCCEEECCCCCCCCCCCEEEEEEEECCCCCCEEE NGEPAGYVQRPPGVRNLPKVFALHVLSDSMVPRYEPGDLIYCGGRDAIPGDHVVIETFPE CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCC ENEKNGKAFVKKLVKRTASELVVEQYNPPKTLTFNRYAIKHVWRVIPLKELLGY CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA