| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13471841
Identifier: 13471841
GI number: 13471841
Start: 1601658
End: 1602608
Strand: Direct
Name: 13471841
Synonym: mlr1946
Alternate gene names: NA
Gene position: 1601658-1602608 (Clockwise)
Preceding gene: 13471840
Following gene: 13471842
Centisome position: 22.76
GC content: 66.56
Gene sequence:
>951_bases GTGCCCGAGGTCAGCTTCATCATCTGCACGCGCAACCGCGTCGCCGTGCTCGAGGCCTGCCTCAAGTCGGTGCAGGCCGC GTGCCGTGCCCATGCCGGCTTCGCGGCCGAGCTCGTGGTCGTCGACAATGGCTCGAGCGACCGCACGGCGGAACGCCTGG CCAGCATCGCCGCGATGTCGGATATTCCATTCACGCCCGTTAGCGAGCCACGCCGCGGACTGGCGGCGGCCCGTAACGCC GGGTTGAGGCGCGCCAGGGGGCGCGTGCTGGTCTTCGTCGATGATGATTGCGCGGTGCATTGCGACTATCTGCGCGACCT GGAACGACATTATGCTTCCGGCGAACAGGGGCTCATCCGCGGAGGCCGTGTCGAGCTCGGGGATCCCAGGGACTTGCCGT TTACGATCAAGCGATCGCGGGTGTGCGAGCGGCTGACGCCCGATATTCATCCCGGCGGCTTCGTGCTGGGCTGCAACATG ACGATGCACCGCGACGTCGCGGCCCGCATCGGCGATTTCGACGAACGCTTTGGCGCGGGTGGGCCCTTGCGGTCGGCGGA GGATACCGACTACCTCGTGCGAGCGGTGCTGCTCGGCATCCCGGTCGAGTACGTGCCTGACATGACGATATTCCATCATC ACGGCCGGCGGGACCGCAAAGCCATCGAAAAGCTCCACCGCGACTACAGCCTGGGCAATGGCGGGCTCTGCCTGAAACAT ATCCGCCACGCGCCCTGGCTGCTTCGCCATTTCTACTGGGCCGCGAGAGGGGCCTTGCGGGAATTGGCGGGCGGACCCGC TTTCGATCGTGACCTCGATCTGTCGCATCGGCCGATCGTCGGCATGAATGTGCTCGGCGCCGCCAGATACGCGCTGCTCC TGCTGGCGAGACGGCCGCAGGCCGAGCCGGCGCGGCAGGATCAACAAGCCAATGCCGAGGCACCACTGTGA
Upstream 100 bases:
>100_bases GTGGGCTAGAGGAATGACCGTCAATGCCCACCAACCTCTGCGGCGCGATCGTTCGACGGCGCTTGGCCTCGCCCCGGCCG ATCCACGACCGGAGCGATCG
Downstream 100 bases:
>100_bases TGCCATTGCTCCCGCCTGGCCTCCCGATGCTGTTCCGCACGTTCGGAACGCGGCAACTGCGCCTGGTTCCGGCCGTGGTG GTCCTCGGCCTGGTCGGCGC
Product: glycosyl transferase
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyltransferase Protein; Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Family 2 Glycosyl Transferase
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MPEVSFIICTRNRVAVLEACLKSVQAACRAHAGFAAELVVVDNGSSDRTAERLASIAAMSDIPFTPVSEPRRGLAAARNA GLRRARGRVLVFVDDDCAVHCDYLRDLERHYASGEQGLIRGGRVELGDPRDLPFTIKRSRVCERLTPDIHPGGFVLGCNM TMHRDVAARIGDFDERFGAGGPLRSAEDTDYLVRAVLLGIPVEYVPDMTIFHHHGRRDRKAIEKLHRDYSLGNGGLCLKH IRHAPWLLRHFYWAARGALRELAGGPAFDRDLDLSHRPIVGMNVLGAARYALLLLARRPQAEPARQDQQANAEAPL
Sequences:
>Translated_316_residues MPEVSFIICTRNRVAVLEACLKSVQAACRAHAGFAAELVVVDNGSSDRTAERLASIAAMSDIPFTPVSEPRRGLAAARNA GLRRARGRVLVFVDDDCAVHCDYLRDLERHYASGEQGLIRGGRVELGDPRDLPFTIKRSRVCERLTPDIHPGGFVLGCNM TMHRDVAARIGDFDERFGAGGPLRSAEDTDYLVRAVLLGIPVEYVPDMTIFHHHGRRDRKAIEKLHRDYSLGNGGLCLKH IRHAPWLLRHFYWAARGALRELAGGPAFDRDLDLSHRPIVGMNVLGAARYALLLLARRPQAEPARQDQQANAEAPL >Mature_315_residues PEVSFIICTRNRVAVLEACLKSVQAACRAHAGFAAELVVVDNGSSDRTAERLASIAAMSDIPFTPVSEPRRGLAAARNAG LRRARGRVLVFVDDDCAVHCDYLRDLERHYASGEQGLIRGGRVELGDPRDLPFTIKRSRVCERLTPDIHPGGFVLGCNMT MHRDVAARIGDFDERFGAGGPLRSAEDTDYLVRAVLLGIPVEYVPDMTIFHHHGRRDRKAIEKLHRDYSLGNGGLCLKHI RHAPWLLRHFYWAARGALRELAGGPAFDRDLDLSHRPIVGMNVLGAARYALLLLARRPQAEPARQDQQANAEAPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34947; Mature: 34816
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEVSFIICTRNRVAVLEACLKSVQAACRAHAGFAAELVVVDNGSSDRTAERLASIAAMS CCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHC DIPFTPVSEPRRGLAAARNAGLRRARGRVLVFVDDDCAVHCDYLRDLERHYASGEQGLIR CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCEEHHHHHHHHHHHHCCCCCCCEE GGRVELGDPRDLPFTIKRSRVCERLTPDIHPGGFVLGCNMTMHRDVAARIGDFDERFGAG CCEEECCCCCCCCEEEHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHCCHHHHHCCC GPLRSAEDTDYLVRAVLLGIPVEYVPDMTIFHHHGRRDRKAIEKLHRDYSLGNGGLCLKH CCCCCCCHHHHHHHHHHHHCCHHHCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCHHHHH IRHAPWLLRHFYWAARGALRELAGGPAFDRDLDLSHRPIVGMNVLGAARYALLLLARRPQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHCCCC AEPARQDQQANAEAPL CCCCHHHHHCCCCCCC >Mature Secondary Structure PEVSFIICTRNRVAVLEACLKSVQAACRAHAGFAAELVVVDNGSSDRTAERLASIAAMS CCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHC DIPFTPVSEPRRGLAAARNAGLRRARGRVLVFVDDDCAVHCDYLRDLERHYASGEQGLIR CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCEEHHHHHHHHHHHHCCCCCCCEE GGRVELGDPRDLPFTIKRSRVCERLTPDIHPGGFVLGCNMTMHRDVAARIGDFDERFGAG CCEEECCCCCCCCEEEHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHCCHHHHHCCC GPLRSAEDTDYLVRAVLLGIPVEYVPDMTIFHHHGRRDRKAIEKLHRDYSLGNGGLCLKH CCCCCCCHHHHHHHHHHHHCCHHHCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCHHHHH IRHAPWLLRHFYWAARGALRELAGGPAFDRDLDLSHRPIVGMNVLGAARYALLLLARRPQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHCCCC AEPARQDQQANAEAPL CCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA