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The map label for this gene is yibD [C]

Identifier: 13471840

GI number: 13471840

Start: 1600460

End: 1601566

Strand: Direct

Name: yibD [C]

Synonym: mlr1944

Alternate gene names: 13471840

Gene position: 1600460-1601566 (Clockwise)

Preceding gene: 13471839

Following gene: 13471841

Centisome position: 22.75

GC content: 66.85

Gene sequence:

>1107_bases
ATGACCGCCGCGCCGCTCGTCTCCGTCCTGCTGCCGGTCTACAATGCCGGACCCTACCTCGCAGCAGCACTTGGAAGCAT
CCTGCGGCAGGACTACGGCCGCCTGGAGGTCATCGCGATCGACGACGGCTCGAGCGACAATTCGCTCGAGATCCTCGAGC
GATACCGGCAGGCCGACAGCCGCGTCTCGATCATCTCGCGCGAAAACCGCGGCCTCGTCGCGACGCTCAACGAAGGGCTG
GCGGCAGCCCAAGGCGAGCTGGTCGCGCGGATGGACGCCGACGACGTCGCCTATCCCTGGCGCCTGTCGCGCCAGGTGGC
GCTTTTCGAGCAGCGGCCCGAGCTTGGCTTTTGCGGCGCCGGCGTCGACATGTTGATCCGCGGCCGCATCGCCAGGGGCA
GGCCCGATCCGGTGTTCCGGTTCGGCCGCATGCCCATATTGGCGATGTTCTTCACCATCTTCATGCACCCCACGGTCGTC
TACAACAGGAAGGTCATCGAAGACGCCGATCTCCACTACGACCCGACCTACCGGCACGCCGAGGATTTCGATCTCTTCGG
GCGGCTGGCCGCTCGCTACCCGGCGGCCATGATGCCCGAAAACCTGCTCGTCTACCGCGTCCATCAGGCAAGCGTGACCA
GCCGGCACGGCAAGGAGATGCGCAGGACGCATTTGCGGATCGTGGCCGAGAACCTCGAGCGCGAGGGCCTCGCGGAGGCC
ACGCGCGACCTGCGCGACATCGGCGAAGCGGTCAGCTTCGACACGGTTACCCGTGCGGCCGACTTCATCGTCGCGCTGGA
GGAGCGGATCCGCTCTCTGCCGGCCGAGACGCGGCCGAGCTTCGAAGCCGGCGCGCTCAACCTGTTCTATTTCCTTTACC
AGCTCGTCGCCGACGAAAGGCAGCCCCCTTTGACGCATGAATTGCTGAGGCGGACCGCGAAGTGGAACGCCATCCGGCGG
CGCGAGAAATATGCGCTGCGGCCGGGCGCCTGGGCGCCCTGGCTGAGCCTCGCCTCGCTGGCGGCCGGCAAGCAGGCGGA
CGCGGTGGAATATTTCTTCAAATCCGCGCCCGCCGCGGCGGTTCTGGCATCTCATCAGGTGGGCTAG

Upstream 100 bases:

>100_bases
AGGCCGCCGGCTGGTTTGCCAGGCCGGCGCAAGCCTATGCCGGCGGATCGCCCGATGGCCGCACGCCATCCCTCGACCTC
CCGCGAACGGATGCAAGACC

Downstream 100 bases:

>100_bases
AGGAATGACCGTCAATGCCCACCAACCTCTGCGGCGCGATCGTTCGACGGCGCTTGGCCTCGCCCCGGCCGATCCACGAC
CGGAGCGATCGGTGCCCGAG

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MTAAPLVSVLLPVYNAGPYLAAALGSILRQDYGRLEVIAIDDGSSDNSLEILERYRQADSRVSIISRENRGLVATLNEGL
AAAQGELVARMDADDVAYPWRLSRQVALFEQRPELGFCGAGVDMLIRGRIARGRPDPVFRFGRMPILAMFFTIFMHPTVV
YNRKVIEDADLHYDPTYRHAEDFDLFGRLAARYPAAMMPENLLVYRVHQASVTSRHGKEMRRTHLRIVAENLEREGLAEA
TRDLRDIGEAVSFDTVTRAADFIVALEERIRSLPAETRPSFEAGALNLFYFLYQLVADERQPPLTHELLRRTAKWNAIRR
REKYALRPGAWAPWLSLASLAAGKQADAVEYFFKSAPAAAVLASHQVG

Sequences:

>Translated_368_residues
MTAAPLVSVLLPVYNAGPYLAAALGSILRQDYGRLEVIAIDDGSSDNSLEILERYRQADSRVSIISRENRGLVATLNEGL
AAAQGELVARMDADDVAYPWRLSRQVALFEQRPELGFCGAGVDMLIRGRIARGRPDPVFRFGRMPILAMFFTIFMHPTVV
YNRKVIEDADLHYDPTYRHAEDFDLFGRLAARYPAAMMPENLLVYRVHQASVTSRHGKEMRRTHLRIVAENLEREGLAEA
TRDLRDIGEAVSFDTVTRAADFIVALEERIRSLPAETRPSFEAGALNLFYFLYQLVADERQPPLTHELLRRTAKWNAIRR
REKYALRPGAWAPWLSLASLAAGKQADAVEYFFKSAPAAAVLASHQVG
>Mature_367_residues
TAAPLVSVLLPVYNAGPYLAAALGSILRQDYGRLEVIAIDDGSSDNSLEILERYRQADSRVSIISRENRGLVATLNEGLA
AAQGELVARMDADDVAYPWRLSRQVALFEQRPELGFCGAGVDMLIRGRIARGRPDPVFRFGRMPILAMFFTIFMHPTVVY
NRKVIEDADLHYDPTYRHAEDFDLFGRLAARYPAAMMPENLLVYRVHQASVTSRHGKEMRRTHLRIVAENLEREGLAEAT
RDLRDIGEAVSFDTVTRAADFIVALEERIRSLPAETRPSFEAGALNLFYFLYQLVADERQPPLTHELLRRTAKWNAIRRR
EKYALRPGAWAPWLSLASLAAGKQADAVEYFFKSAPAAAVLASHQVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI57770468, Length=145, Percent_Identity=33.1034482758621, Blast_Score=70, Evalue=3e-12,
Organism=Escherichia coli, GI1790044, Length=233, Percent_Identity=28.3261802575107, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1788372, Length=205, Percent_Identity=29.2682926829268, Blast_Score=78, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 41303; Mature: 41172

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAPLVSVLLPVYNAGPYLAAALGSILRQDYGRLEVIAIDDGSSDNSLEILERYRQADS
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCC
RVSIISRENRGLVATLNEGLAAAQGELVARMDADDVAYPWRLSRQVALFEQRPELGFCGA
CEEEEECCCCCEEEECCCCHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
GVDMLIRGRIARGRPDPVFRFGRMPILAMFFTIFMHPTVVYNRKVIEDADLHYDPTYRHA
CHHHHHHCHHCCCCCCHHHHHCCHHHHHHHHHHHHCCHHHCCCHHHCCCCCCCCCCCCCC
EDFDLFGRLAARYPAAMMPENLLVYRVHQASVTSRHGKEMRRTHLRIVAENLEREGLAEA
CHHHHHHHHHHHCCHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRDLRDIGEAVSFDTVTRAADFIVALEERIRSLPAETRPSFEAGALNLFYFLYQLVADER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCC
QPPLTHELLRRTAKWNAIRRREKYALRPGAWAPWLSLASLAAGKQADAVEYFFKSAPAAA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHH
VLASHQVG
HHHHCCCC
>Mature Secondary Structure 
TAAPLVSVLLPVYNAGPYLAAALGSILRQDYGRLEVIAIDDGSSDNSLEILERYRQADS
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCC
RVSIISRENRGLVATLNEGLAAAQGELVARMDADDVAYPWRLSRQVALFEQRPELGFCGA
CEEEEECCCCCEEEECCCCHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
GVDMLIRGRIARGRPDPVFRFGRMPILAMFFTIFMHPTVVYNRKVIEDADLHYDPTYRHA
CHHHHHHCHHCCCCCCHHHHHCCHHHHHHHHHHHHCCHHHCCCHHHCCCCCCCCCCCCCC
EDFDLFGRLAARYPAAMMPENLLVYRVHQASVTSRHGKEMRRTHLRIVAENLEREGLAEA
CHHHHHHHHHHHCCHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRDLRDIGEAVSFDTVTRAADFIVALEERIRSLPAETRPSFEAGALNLFYFLYQLVADER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCC
QPPLTHELLRRTAKWNAIRRREKYALRPGAWAPWLSLASLAAGKQADAVEYFFKSAPAAA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHH
VLASHQVG
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]