| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is hexR [C]
Identifier: 13471792
GI number: 13471792
Start: 1549199
End: 1550092
Strand: Direct
Name: hexR [C]
Synonym: mlr1883
Alternate gene names: 13471792
Gene position: 1549199-1550092 (Clockwise)
Preceding gene: 13471790
Following gene: 13471793
Centisome position: 22.02
GC content: 65.66
Gene sequence:
>894_bases ATGAGTGGGGCAGGCAAATCTTCGGGACGATCTCTTGCCGACGAGGCGGCGACGCGCAAGCGCGGGCGCTCTCTTGCCGC GTTGGGCTATACCCAGCCGCAGACCTATGAGGAATTGCGCGCCGTGCTCTCCTCCGGCACCGTGCATTTTCCCAAGCGGC TGCGCCAGGTGGCGATCTTCATGTGGCAGCATCCCAGCGATGTCGCGCTCGGCACCATCGCGCAGGTGGCCGCGCAGGCG GGCGTGCAGCCCTCGACGCTGGTGCGCTTTGCCCAGATCTTCGGCTATTCCGGCTTTTCCGATTTCCAGGGCCTGTTCAA GGAGCATGTCAAGGGTTCATGGCCGGAAGGGCGCGGCGAGCCGCGCACCGAGGTCGAACCCAATGCCGCCATGCATTTCC TGCACGGCATGGTCGGCGCCTCGCAGGCCTCGCTTGGCCGCATCGAGACCGGCTTCGACGTCGAGAGCTTCGAAAAGATG GTGACGCTGCTGGCGGCCGCCGAACTGATCTATGTCATCGGCTCCAAGCGCGCCTTTCCGGTCACCGCGTATTTGTCGCT GACGCTGTCCCAGCAAGGCGTGCGCAACGTGCTGGTCGACAATGTCGGCTCCTCGGCGCTCGACCAGGTCGGCTGCATCG GCAGCCGGGATGCGGTGCTGGCCGTCTCCTTCAGCCCCTACAATTCGATCACGCCCGACCTGGTCGCGGTGGCGCATGAG CGCAAGGCCCGCATCGTCACCATCACCGACAGCACGTTCAGCCCGCTGATCGCTTTGTCGGACAGCTGGCTGGAAGTGGT GGAATCCGACTTCGCCGGCTTCCGCTCGCTGGCGGCATCGCTGGCGGTGGGCATGGCGCTGGTCCAAGGCGTCGCGGCAA AACGCGGCGCATGA
Upstream 100 bases:
>100_bases CTGCTTCGCCCTAGGATGACGACGGTGAGGACCTACCACTTTCGAACACAATTTCCAATTTCCGTATTGTAATACGATTG TGCCACGCTAGCCTGAGATC
Downstream 100 bases:
>100_bases GGCGCTGCTGGCACAATTGACTATCGGGAATTGCCGTTCCATATTTTAAAAAATAGAAACTTTGTTCCGGGAGGAGGAAT GGAGCTTCATCTCCAAGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator RpiR Family; Transcriptional Regulator; SIS Domain Protein; SIS Domain-Containing Protein; Transcriptional Regulator Protein; Sugar Isomerase; Transcriptional Regulator Rpir Family; SIS Family Regulator; Transcription Regulator Protein; Transcriptional Regulator RpiR Family Protein; N-Acylmannosamine Kinase; RpiR-Family Transcriptional Regulator; Transcriptional Regulator Of Myo-Inositol Catabolism Operon; Bifunctional Protein Glk; Transcriptional Regulator IolR; N-Acetylmannosamine Kinase; GlvR Family Transcriptional Regulator; RpiR Family Regulatory; HTH Transcriptional Regulator Sugar Isomerasedomain; RipR Family Transcriptional Regulator; Transcriptional Regulator Family Protein; RpiR Family Transcription Regulator Protein; HTH/SIS Domain-Containing Protein; Sugar Isomerase Family Protein; Helix-Turn-Helix Domain RpiR Family
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MSGAGKSSGRSLADEAATRKRGRSLAALGYTQPQTYEELRAVLSSGTVHFPKRLRQVAIFMWQHPSDVALGTIAQVAAQA GVQPSTLVRFAQIFGYSGFSDFQGLFKEHVKGSWPEGRGEPRTEVEPNAAMHFLHGMVGASQASLGRIETGFDVESFEKM VTLLAAAELIYVIGSKRAFPVTAYLSLTLSQQGVRNVLVDNVGSSALDQVGCIGSRDAVLAVSFSPYNSITPDLVAVAHE RKARIVTITDSTFSPLIALSDSWLEVVESDFAGFRSLAASLAVGMALVQGVAAKRGA
Sequences:
>Translated_297_residues MSGAGKSSGRSLADEAATRKRGRSLAALGYTQPQTYEELRAVLSSGTVHFPKRLRQVAIFMWQHPSDVALGTIAQVAAQA GVQPSTLVRFAQIFGYSGFSDFQGLFKEHVKGSWPEGRGEPRTEVEPNAAMHFLHGMVGASQASLGRIETGFDVESFEKM VTLLAAAELIYVIGSKRAFPVTAYLSLTLSQQGVRNVLVDNVGSSALDQVGCIGSRDAVLAVSFSPYNSITPDLVAVAHE RKARIVTITDSTFSPLIALSDSWLEVVESDFAGFRSLAASLAVGMALVQGVAAKRGA >Mature_296_residues SGAGKSSGRSLADEAATRKRGRSLAALGYTQPQTYEELRAVLSSGTVHFPKRLRQVAIFMWQHPSDVALGTIAQVAAQAG VQPSTLVRFAQIFGYSGFSDFQGLFKEHVKGSWPEGRGEPRTEVEPNAAMHFLHGMVGASQASLGRIETGFDVESFEKMV TLLAAAELIYVIGSKRAFPVTAYLSLTLSQQGVRNVLVDNVGSSALDQVGCIGSRDAVLAVSFSPYNSITPDLVAVAHER KARIVTITDSTFSPLIALSDSWLEVVESDFAGFRSLAASLAVGMALVQGVAAKRGA
Specific function: Represses The Expression Of The Hex Regulon (Zwf, Eda, Glp And Gap) (By Similarity). [C]
COG id: COG1737
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31595; Mature: 31464
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: PS51071 HTH_RPIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGAGKSSGRSLADEAATRKRGRSLAALGYTQPQTYEELRAVLSSGTVHFPKRLRQVAIF CCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH MWQHPSDVALGTIAQVAAQAGVQPSTLVRFAQIFGYSGFSDFQGLFKEHVKGSWPEGRGE HHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCC PRTEVEPNAAMHFLHGMVGASQASLGRIETGFDVESFEKMVTLLAAAELIYVIGSKRAFP CCCCCCCHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCE VTAYLSLTLSQQGVRNVLVDNVGSSALDQVGCIGSRDAVLAVSFSPYNSITPDLVAVAHE EEEHEEEHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHC RKARIVTITDSTFSPLIALSDSWLEVVESDFAGFRSLAASLAVGMALVQGVAAKRGA CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SGAGKSSGRSLADEAATRKRGRSLAALGYTQPQTYEELRAVLSSGTVHFPKRLRQVAIF CCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH MWQHPSDVALGTIAQVAAQAGVQPSTLVRFAQIFGYSGFSDFQGLFKEHVKGSWPEGRGE HHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCC PRTEVEPNAAMHFLHGMVGASQASLGRIETGFDVESFEKMVTLLAAAELIYVIGSKRAFP CCCCCCCHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCE VTAYLSLTLSQQGVRNVLVDNVGSSALDQVGCIGSRDAVLAVSFSPYNSITPDLVAVAHE EEEHEEEHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHC RKARIVTITDSTFSPLIALSDSWLEVVESDFAGFRSLAASLAVGMALVQGVAAKRGA CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA