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The map label for this gene is potC [H]

Identifier: 13471690

GI number: 13471690

Start: 1454044

End: 1454832

Strand: Reverse

Name: potC [H]

Synonym: mll1739

Alternate gene names: 13471690

Gene position: 1454832-1454044 (Counterclockwise)

Preceding gene: 13471691

Following gene: 13471689

Centisome position: 20.68

GC content: 62.48

Gene sequence:

>789_bases
ATGGCGACCACCCGCATCCTCGAAGGGCTCGGCCGCCTCTATATCTTGCTGCTGCTCGCCTTTCTCTATCTGCCCATCAT
CATCATGGCGCTGATGTCGTTCAACGTCTCGCCCTTCTACCAATTGCCGTTCGAATGGACGACCGAGTGGTACGCCTCGC
TGTGGCAGAACGACCAGCTGATCGCGGCCACCTGGAACAGCCTCGAGATCGCAATCATCACCACGATCATCAGCGTGGCG
CTCGGCTCGGCGGCGTCGCTGGCGCTCTACCGCTACGAATTTCGCGGCAAGAAGGTGCTGCAGGCGCTGCTCTTTCCGCC
GATCGCCATTCCGTGGCTGATCACCGGCACGGCGATGCTGATCTTCTTCTTCGGCGTCGGCATCGGGCGCGGCCTGTTTG
CCATCCTGCTCGGCCATGTCGCATTGGCGCTGCCCTATGTCATCGTCGTCGTCTCGGCGCGGCTGCAGACCTTCGCGCCG
GAGCTGGAGGAGGCGGCGCGATCGCTCGGCGCCAATCAGTGGCAGGTCACAATGCGCGTGACGCTGCCGTGGATCATGCC
GGGCGTCATCGCCGGCGGGCTGTTTGCGTTTGCCGTGTCGTTCGACCAGTTCGTCGTCTCCTACTTCCTGTCGACGCCCG
GCCAGACGACGCTGCCGGTCGAGATCTATGCCGCGATCCGCAAGGGGTTCACGCCCGAGATCAATGCGGTGTCGACCATC
ATCATTGTCGTGTCGATGGCGCTGATGCTGCTGACGGCGCGCTTCTTCAAATTCGGCGGAGAGAAATAA

Upstream 100 bases:

>100_bases
TCTTCAACTGGCCGCTGGGAGCGGCGCTCTCCTTCATCCTGCTCGCCGTCGTGCTGGTCATCCTGGCGATTGCCTCGCCG
GTGTTGCGGAGGGCCGCGTG

Downstream 100 bases:

>100_bases
TGGCCGGCGTGCAGGTAGCGAACGTCTCGCGCAGCTTTGGCGCGCACAAGGCGCTGGACGATGTCTCCATCGATTTCGCC
GATGGCGGCTTCTATGCGCT

Product: permease protein of polyamine ABC transporter

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MATTRILEGLGRLYILLLLAFLYLPIIIMALMSFNVSPFYQLPFEWTTEWYASLWQNDQLIAATWNSLEIAIITTIISVA
LGSAASLALYRYEFRGKKVLQALLFPPIAIPWLITGTAMLIFFFGVGIGRGLFAILLGHVALALPYVIVVVSARLQTFAP
ELEEAARSLGANQWQVTMRVTLPWIMPGVIAGGLFAFAVSFDQFVVSYFLSTPGQTTLPVEIYAAIRKGFTPEINAVSTI
IIVVSMALMLLTARFFKFGGEK

Sequences:

>Translated_262_residues
MATTRILEGLGRLYILLLLAFLYLPIIIMALMSFNVSPFYQLPFEWTTEWYASLWQNDQLIAATWNSLEIAIITTIISVA
LGSAASLALYRYEFRGKKVLQALLFPPIAIPWLITGTAMLIFFFGVGIGRGLFAILLGHVALALPYVIVVVSARLQTFAP
ELEEAARSLGANQWQVTMRVTLPWIMPGVIAGGLFAFAVSFDQFVVSYFLSTPGQTTLPVEIYAAIRKGFTPEINAVSTI
IIVVSMALMLLTARFFKFGGEK
>Mature_261_residues
ATTRILEGLGRLYILLLLAFLYLPIIIMALMSFNVSPFYQLPFEWTTEWYASLWQNDQLIAATWNSLEIAIITTIISVAL
GSAASLALYRYEFRGKKVLQALLFPPIAIPWLITGTAMLIFFFGVGIGRGLFAILLGHVALALPYVIVVVSARLQTFAPE
LEEAARSLGANQWQVTMRVTLPWIMPGVIAGGLFAFAVSFDQFVVSYFLSTPGQTTLPVEIYAAIRKGFTPEINAVSTII
IVVSMALMLLTARFFKFGGEK

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine and spermidine [H]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787368, Length=218, Percent_Identity=36.697247706422, Blast_Score=160, Evalue=6e-41,
Organism=Escherichia coli, GI1787081, Length=239, Percent_Identity=38.4937238493724, Blast_Score=149, Evalue=1e-37,
Organism=Escherichia coli, GI1787714, Length=228, Percent_Identity=34.6491228070175, Blast_Score=103, Evalue=8e-24,
Organism=Escherichia coli, GI1788764, Length=169, Percent_Identity=28.9940828402367, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1786980, Length=120, Percent_Identity=30.8333333333333, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1787571, Length=230, Percent_Identity=26.0869565217391, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28971; Mature: 28840

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTRILEGLGRLYILLLLAFLYLPIIIMALMSFNVSPFYQLPFEWTTEWYASLWQNDQL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHCCCCE
IAATWNSLEIAIITTIISVALGSAASLALYRYEFRGKKVLQALLFPPIAIPWLITGTAML
EEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IFFFGVGIGRGLFAILLGHVALALPYVIVVVSARLQTFAPELEEAARSLGANQWQVTMRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCEEEEEEE
TLPWIMPGVIAGGLFAFAVSFDQFVVSYFLSTPGQTTLPVEIYAAIRKGFTPEINAVSTI
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHH
IIVVSMALMLLTARFFKFGGEK
HHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ATTRILEGLGRLYILLLLAFLYLPIIIMALMSFNVSPFYQLPFEWTTEWYASLWQNDQL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHCCCCE
IAATWNSLEIAIITTIISVALGSAASLALYRYEFRGKKVLQALLFPPIAIPWLITGTAML
EEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IFFFGVGIGRGLFAILLGHVALALPYVIVVVSARLQTFAPELEEAARSLGANQWQVTMRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCEEEEEEE
TLPWIMPGVIAGGLFAFAVSFDQFVVSYFLSTPGQTTLPVEIYAAIRKGFTPEINAVSTI
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHH
IIVVSMALMLLTARFFKFGGEK
HHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]