Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13471687

Identifier: 13471687

GI number: 13471687

Start: 1451219

End: 1451659

Strand: Reverse

Name: 13471687

Synonym: mll1736

Alternate gene names: NA

Gene position: 1451659-1451219 (Counterclockwise)

Preceding gene: 13471688

Following gene: 13471686

Centisome position: 20.63

GC content: 65.53

Gene sequence:

>441_bases
GTGACGCAGCCGATTGCAAAGGACGCCGTCGAACGGCTGGGCACTTTCCAACTTGCCGGTGAGGCGGACGGCCTGGCCTT
GGTGTTCTCGCAGCCGCTCAGTTTCTGGGGCGGCATCGACGCCGAGACGGGTGACATCATCGACCATTCGCATCCTGGGC
TGGGCCAGAATGTCGCCGGCAGGATCCTGGTCATGCCGAGCGGGCGAGGGTCGTCCTCGTCGTCGTCCGTCCTGGCCGAA
GCGATCCGCCGGGGTACCGCGCCGGCCGGCATTCTTTTGGAGCGGCCGGACCCGATCCTGGCGGTGGGCGCCATCGTCGC
CGAGTTTCTCTACGACATCCATATGCCGCTGGTGGTCTGCGACATTGCAGGGATTGCTTCCGGCGACCGGATCGCCATCC
GTGTCGGTGAGCAGGGCGAGGCGGTCATCCATAAAGCCTAA

Upstream 100 bases:

>100_bases
CGCATTACGCGCCGGGCAATATCGGTGTGACCGTCGCCTTCGCCGAGATGGCGGATTGCATCCGCTCCGCGGCGGCCGGA
CATGTCGTGCGGGGTGCCTC

Downstream 100 bases:

>100_bases
CAAACGCTGCCCCCAGTGATTGGTGTCGCCGATGACGGCGGTGATGGGAAATGATGGTGCCGGCCTTGGCTGACCGGCAA
GCCGTGGCGCTATATGCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MTQPIAKDAVERLGTFQLAGEADGLALVFSQPLSFWGGIDAETGDIIDHSHPGLGQNVAGRILVMPSGRGSSSSSSVLAE
AIRRGTAPAGILLERPDPILAVGAIVAEFLYDIHMPLVVCDIAGIASGDRIAIRVGEQGEAVIHKA

Sequences:

>Translated_146_residues
MTQPIAKDAVERLGTFQLAGEADGLALVFSQPLSFWGGIDAETGDIIDHSHPGLGQNVAGRILVMPSGRGSSSSSSVLAE
AIRRGTAPAGILLERPDPILAVGAIVAEFLYDIHMPLVVCDIAGIASGDRIAIRVGEQGEAVIHKA
>Mature_145_residues
TQPIAKDAVERLGTFQLAGEADGLALVFSQPLSFWGGIDAETGDIIDHSHPGLGQNVAGRILVMPSGRGSSSSSSVLAEA
IRRGTAPAGILLERPDPILAVGAIVAEFLYDIHMPLVVCDIAGIASGDRIAIRVGEQGEAVIHKA

Specific function: Unknown

COG id: COG1786

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0107 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015928
- InterPro:   IPR002840
- InterPro:   IPR008279
- InterPro:   IPR012016
- InterPro:   IPR020794 [H]

Pfam domain/function: PF01989 DUF126 [H]

EC number: NA

Molecular weight: Translated: 15106; Mature: 14975

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPIAKDAVERLGTFQLAGEADGLALVFSQPLSFWGGIDAETGDIIDHSHPGLGQNVAG
CCCCHHHHHHHHHCCEEECCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCC
RILVMPSGRGSSSSSSVLAEAIRRGTAPAGILLERPDPILAVGAIVAEFLYDIHMPLVVC
EEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHEE
DIAGIASGDRIAIRVGEQGEAVIHKA
HHHCCCCCCEEEEEECCCCCEEEECC
>Mature Secondary Structure 
TQPIAKDAVERLGTFQLAGEADGLALVFSQPLSFWGGIDAETGDIIDHSHPGLGQNVAG
CCCHHHHHHHHHCCEEECCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCC
RILVMPSGRGSSSSSSVLAEAIRRGTAPAGILLERPDPILAVGAIVAEFLYDIHMPLVVC
EEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHEE
DIAGIASGDRIAIRVGEQGEAVIHKA
HHHCCCCCCEEEEEECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014 [H]