Click here to switch to the map view.

The map label for this gene is 13471675

Identifier: 13471675

GI number: 13471675

Start: 1437072

End: 1438115

Strand: Reverse

Name: 13471675

Synonym: mll1723

Alternate gene names: NA

Gene position: 1438115-1437072 (Counterclockwise)

Preceding gene: 13471676

Following gene: 13471674

Centisome position: 20.44

GC content: 66.28

Gene sequence:

>1044_bases
ATGATCCTCGATCCGATCCTGGATATGTTTCGCGGCAAGGCGGTGACCATCCCGCCGCTCGACGGCGCTTTCCGGCCCAA
CACGCGGCTGGATGACGCGCCAACCTTCGCCGAGCTAACCGAGCCGGATAATCTGCTGGCCGATGGTGGCCGGCTGCTCG
CTACCAGCGGCAACGCAATCTATTCGCTTGCCGCCGGAGCCGAGCCCAAGGTGATCGAGACCTTTCCGTCGCCCATCACG
GCGCAGGCGCTGGCGCCATCGGGTGACCTGACGGTGGCTCTCGAAAGCGGCAAGCTGCTGACATCAGGCAAGGAGGTTTC
GCTGCCGGCTGATCTCAGCTGCATCACTGCGCTTGCCTATGCCGAAGACGGCACGTTGTGGCTGGCCAATGGGTCGGCCG
AGCATGCGCCCTCGCAATGGGCGGCCGATCTGATGAAGAAGGGTGCGTCCGGTTCGCTTTGGAAACGCGACGCGACGGGG
GGCGCGTTCCGCAAGGTGGCCGGCGCTCTCGCTTTTCCCTATGGGCTCCTTCCTCTCGGCGGGGACGTGCTGGTCAGCGA
GAGCTGGCGCCATCAGCTCATCCGCTTCGATGGCGCCACCGGCAACCGTTCGACGGTGCTGACGCATCTGCCCGGCTATC
CCGCGCGGCTGGCGTCGGCCGGAGATGGCGGTGCCTGGCTGGCGCTGTTTGCGCCGCGCAACCGGCTGATCGAATTCGTG
CTGCAGGAAACGCACTACCGCCAGGACATGATCGACCAGGTGCCGCCGGCCTACTGGATCGCGCCGGCGCTGGCCTCCAA
CCGCAGCTTCCTCGAACCGCTGCAATGCGGCGGCATCCGCACGATGGGCATCCACAAGCCGTGGTCGCCAAGCCGCTCCT
ATGGGCTGGTCGTCAGGCTCGACGCAAGGATGCAGCCGCAATTCAGCCTGCACAGCCGCGCCAACGGCACGCGCCACGGC
ATCTGCAGCGTCGTGGAAAAGGCCGGCCGGCTGTTCATCGCCTCCAAGGGCGGCGATTGCGTGCTCGACGCGGGAGGTTT
TTGA

Upstream 100 bases:

>100_bases
TCTTCGTCGGCGGCATCCTCAACAACCGCGTCGGCCGCTACAAGATATCAGGCGCCGACCCGAACTGGACCAGCCCCGCT
TCCTATTGGGGAGCAAAGCC

Downstream 100 bases:

>100_bases
TGGAACCGATCGTTCGCCTGGAAAACGTCACCAAAAACTATCGTGGTGTGCCCGCGGTCAAGAATGTCAGCTTCGACTTG
CGCAAGGGTGAAATCCACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NHL Repeat Containing Protein; Strictosidine Synthase Conserved Region; Inner-Membrane Translocator; Strictosidine Synthase Subfamily

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MILDPILDMFRGKAVTIPPLDGAFRPNTRLDDAPTFAELTEPDNLLADGGRLLATSGNAIYSLAAGAEPKVIETFPSPIT
AQALAPSGDLTVALESGKLLTSGKEVSLPADLSCITALAYAEDGTLWLANGSAEHAPSQWAADLMKKGASGSLWKRDATG
GAFRKVAGALAFPYGLLPLGGDVLVSESWRHQLIRFDGATGNRSTVLTHLPGYPARLASAGDGGAWLALFAPRNRLIEFV
LQETHYRQDMIDQVPPAYWIAPALASNRSFLEPLQCGGIRTMGIHKPWSPSRSYGLVVRLDARMQPQFSLHSRANGTRHG
ICSVVEKAGRLFIASKGGDCVLDAGGF

Sequences:

>Translated_347_residues
MILDPILDMFRGKAVTIPPLDGAFRPNTRLDDAPTFAELTEPDNLLADGGRLLATSGNAIYSLAAGAEPKVIETFPSPIT
AQALAPSGDLTVALESGKLLTSGKEVSLPADLSCITALAYAEDGTLWLANGSAEHAPSQWAADLMKKGASGSLWKRDATG
GAFRKVAGALAFPYGLLPLGGDVLVSESWRHQLIRFDGATGNRSTVLTHLPGYPARLASAGDGGAWLALFAPRNRLIEFV
LQETHYRQDMIDQVPPAYWIAPALASNRSFLEPLQCGGIRTMGIHKPWSPSRSYGLVVRLDARMQPQFSLHSRANGTRHG
ICSVVEKAGRLFIASKGGDCVLDAGGF
>Mature_347_residues
MILDPILDMFRGKAVTIPPLDGAFRPNTRLDDAPTFAELTEPDNLLADGGRLLATSGNAIYSLAAGAEPKVIETFPSPIT
AQALAPSGDLTVALESGKLLTSGKEVSLPADLSCITALAYAEDGTLWLANGSAEHAPSQWAADLMKKGASGSLWKRDATG
GAFRKVAGALAFPYGLLPLGGDVLVSESWRHQLIRFDGATGNRSTVLTHLPGYPARLASAGDGGAWLALFAPRNRLIEFV
LQETHYRQDMIDQVPPAYWIAPALASNRSFLEPLQCGGIRTMGIHKPWSPSRSYGLVVRLDARMQPQFSLHSRANGTRHG
ICSVVEKAGRLFIASKGGDCVLDAGGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36903; Mature: 36903

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILDPILDMFRGKAVTIPPLDGAFRPNTRLDDAPTFAELTEPDNLLADGGRLLATSGNAI
CCCHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHCCCCHHHHCCCEEEEECCCEE
YSLAAGAEPKVIETFPSPITAQALAPSGDLTVALESGKLLTSGKEVSLPADLSCITALAY
EEEECCCCCCEEECCCCCCEEHHCCCCCCEEEEEECCEEEECCCCCCCCCCHHHHHHEEE
AEDGTLWLANGSAEHAPSQWAADLMKKGASGSLWKRDATGGAFRKVAGALAFPYGLLPLG
ECCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCC
GDVLVSESWRHQLIRFDGATGNRSTVLTHLPGYPARLASAGDGGAWLALFAPRNRLIEFV
CCEEECCHHCEEEEEEECCCCCCCEEEEECCCCCHHHCCCCCCCEEEEEECCHHHHHHHH
LQETHYRQDMIDQVPPAYWIAPALASNRSFLEPLQCGGIRTMGIHKPWSPSRSYGLVVRL
HHHHHHHHHHHHHCCCCEEEHHHHHCCCCHHCHHHCCCEEEECCCCCCCCCCCCEEEEEE
DARMQPQFSLHSRANGTRHGICSVVEKAGRLFIASKGGDCVLDAGGF
CCCCCCCEEHHHCCCCCHHHHHHHHHHCCCEEEEECCCCEEEECCCC
>Mature Secondary Structure
MILDPILDMFRGKAVTIPPLDGAFRPNTRLDDAPTFAELTEPDNLLADGGRLLATSGNAI
CCCHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHCCCCHHHHCCCEEEEECCCEE
YSLAAGAEPKVIETFPSPITAQALAPSGDLTVALESGKLLTSGKEVSLPADLSCITALAY
EEEECCCCCCEEECCCCCCEEHHCCCCCCEEEEEECCEEEECCCCCCCCCCHHHHHHEEE
AEDGTLWLANGSAEHAPSQWAADLMKKGASGSLWKRDATGGAFRKVAGALAFPYGLLPLG
ECCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCC
GDVLVSESWRHQLIRFDGATGNRSTVLTHLPGYPARLASAGDGGAWLALFAPRNRLIEFV
CCEEECCHHCEEEEEEECCCCCCCEEEEECCCCCHHHCCCCCCCEEEEEECCHHHHHHHH
LQETHYRQDMIDQVPPAYWIAPALASNRSFLEPLQCGGIRTMGIHKPWSPSRSYGLVVRL
HHHHHHHHHHHHHCCCCEEEHHHHHCCCCHHCHHHCCCEEEECCCCCCCCCCCCEEEEEE
DARMQPQFSLHSRANGTRHGICSVVEKAGRLFIASKGGDCVLDAGGF
CCCCCCCEEHHHCCCCCHHHHHHHHHHCCCEEEEECCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA