| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is hcrC [H]
Identifier: 13471661
GI number: 13471661
Start: 1422254
End: 1422736
Strand: Direct
Name: hcrC [H]
Synonym: mlr1701
Alternate gene names: 13471661
Gene position: 1422254-1422736 (Clockwise)
Preceding gene: 13471660
Following gene: 57165212
Centisome position: 20.21
GC content: 64.18
Gene sequence:
>483_bases ATGGCGAAGGTCCCGGTTCAATTCATACTCAACGGCTCCGAGAAAGCCGAATTCATCGACAGCGGCACGACGCTGCTCAA CGCTTTGCGCGACAAGATCGGCGACACCTCGCCGAAAGGCGGCTGCCACCAGGGCACATGCGGCGCCTGTTCGGTCATCA TCGACGGCGAACTCAGGCTCTCCTGCCTGACGCTGGCCGAAACCTGCGATGGCGCTGCCATCACCACGACATCCGGCCTT GCCGAAGGTGGCGTGCTGCATCCGCTGCAGCGCGCCTTCCTCGACACATTCGCCACGCAATGCGGCTTCTGCACGCCGGG CATGATCATGGCCGCCAAGGTGCTTCTCGACCAAACGCCCAATCCCAGCCGCGACGAGGTGGTGGAAGCGCTGTCGGGCA ACATCTGCCGCTGCACCGGCTACGAGCCAATCATCCAGGCGGTGCTCACGGCGGCCCGCGCCAATTCGCAGAACGCAGCC TAG
Upstream 100 bases:
>100_bases AGTCCTGCCGGTCCATCTCGGCCGGCTGCTGCTGACCTGAAATCACCGTTGGGGGGCGCGCGTCTGTCCGATCCGTCGGG CAGGCGCGCAAGGAGGAAAC
Downstream 100 bases:
>100_bases AGCCGGATGATTTCAGGTCTGTTCGACCTGAAATCTGAATCCGGCTCTAAATCAAAGAGATAGAGCATGATGTCGTCCGA AAACCGCTTCACACTTTTCG
Product: dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MAKVPVQFILNGSEKAEFIDSGTTLLNALRDKIGDTSPKGGCHQGTCGACSVIIDGELRLSCLTLAETCDGAAITTTSGL AEGGVLHPLQRAFLDTFATQCGFCTPGMIMAAKVLLDQTPNPSRDEVVEALSGNICRCTGYEPIIQAVLTAARANSQNAA
Sequences:
>Translated_160_residues MAKVPVQFILNGSEKAEFIDSGTTLLNALRDKIGDTSPKGGCHQGTCGACSVIIDGELRLSCLTLAETCDGAAITTTSGL AEGGVLHPLQRAFLDTFATQCGFCTPGMIMAAKVLLDQTPNPSRDEVVEALSGNICRCTGYEPIIQAVLTAARANSQNAA >Mature_159_residues AKVPVQFILNGSEKAEFIDSGTTLLNALRDKIGDTSPKGGCHQGTCGACSVIIDGELRLSCLTLAETCDGAAITTTSGLA EGGVLHPLQRAFLDTFATQCGFCTPGMIMAAKVLLDQTPNPSRDEVVEALSGNICRCTGYEPIIQAVLTAARANSQNAA
Specific function: Catalyzes reductive dehydroxylation of 4-hydroxybenzoyl- CoA. Reaction is not reversible [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=158, Percent_Identity=39.873417721519, Blast_Score=95, Evalue=3e-20, Organism=Homo sapiens, GI71773480, Length=88, Percent_Identity=46.5909090909091, Blast_Score=87, Evalue=6e-18, Organism=Escherichia coli, GI1786480, Length=164, Percent_Identity=37.8048780487805, Blast_Score=112, Evalue=1e-26, Organism=Escherichia coli, GI1789232, Length=148, Percent_Identity=41.2162162162162, Blast_Score=104, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17540638, Length=156, Percent_Identity=40.3846153846154, Blast_Score=117, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17539860, Length=161, Percent_Identity=34.1614906832298, Blast_Score=107, Evalue=3e-24, Organism=Caenorhabditis elegans, GI32566215, Length=154, Percent_Identity=33.7662337662338, Blast_Score=99, Evalue=1e-21, Organism=Drosophila melanogaster, GI17737937, Length=165, Percent_Identity=35.7575757575758, Blast_Score=100, Evalue=8e-22, Organism=Drosophila melanogaster, GI24647195, Length=162, Percent_Identity=36.4197530864198, Blast_Score=91, Evalue=3e-19, Organism=Drosophila melanogaster, GI24647197, Length=162, Percent_Identity=36.4197530864198, Blast_Score=91, Evalue=3e-19, Organism=Drosophila melanogaster, GI24647199, Length=135, Percent_Identity=39.2592592592593, Blast_Score=87, Evalue=6e-18, Organism=Drosophila melanogaster, GI24647193, Length=136, Percent_Identity=38.9705882352941, Blast_Score=87, Evalue=6e-18, Organism=Drosophila melanogaster, GI24647201, Length=135, Percent_Identity=38.5185185185185, Blast_Score=83, Evalue=8e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR017606 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.20 [H]
Molecular weight: Translated: 16605; Mature: 16474
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 5.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVPVQFILNGSEKAEFIDSGTTLLNALRDKIGDTSPKGGCHQGTCGACSVIIDGELRL CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHH SCLTLAETCDGAAITTTSGLAEGGVLHPLQRAFLDTFATQCGFCTPGMIMAAKVLLDQTP HHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC NPSRDEVVEALSGNICRCTGYEPIIQAVLTAARANSQNAA CCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AKVPVQFILNGSEKAEFIDSGTTLLNALRDKIGDTSPKGGCHQGTCGACSVIIDGELRL CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHH SCLTLAETCDGAAITTTSGLAEGGVLHPLQRAFLDTFATQCGFCTPGMIMAAKVLLDQTP HHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC NPSRDEVVEALSGNICRCTGYEPIIQAVLTAARANSQNAA CCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9490068 [H]