| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471524
Identifier: 13471524
GI number: 13471524
Start: 1264676
End: 1265914
Strand: Reverse
Name: 13471524
Synonym: mll1522
Alternate gene names: NA
Gene position: 1265914-1264676 (Counterclockwise)
Preceding gene: 13471526
Following gene: 13471522
Centisome position: 17.99
GC content: 61.02
Gene sequence:
>1239_bases ATGAGATTTCCCAACAACCAAGATGTCGAAATGACCGCTCACAGCATCGTCCTGACACGTAACAATGAATTTGGCGGTGC TGCGGCAAGGGCGGTCGTTGCTGCCATGATCGCCGTCTTGTTTGCCGGCAGCACGGCATTGACCCCGCTCTACATCATCT ACAAGCAGGCGTTCGGTTTCTCCCAGATCACGCTGACCCTGATCTATGCCGTGTATGTGATCGGCAATCTTGCGGCGCTT TTGATCTTCGGCGGCTTGTCGGATGTAATCGGCCGCCGGCCTGCTGCCTTGGCGGCGATGGGTGTGGCCGTCGTCAGCAC GTTGCTTTTCCTGTTCGCCGAAAATGTTGCGTGGCTCGACGCGGCGCGGATTCTGATGGGCCTGGCGATCGGCGTCGGTA CGGGGACCGGCACGGCATGGCTGACCGAACTGATCGCGACCAGCGATAGGTCGCGTGCCGCTACGATCGCCACCAGCACC AATTTCCTGGGTCTCGGACTTGGCGCGCTGGGAGCGGGTCTGCTGGCCGAATATGCACCATGGCCGCTCAGGCTGACCTT CGTTGTCAATCTGGCTGTGCTTGTCCTGGTCACCATATTGATCCTGCGCACGCGCGAGACCGTTTCACGACCAGGGAAAC TGGCGGACATTTCGATGCGGCCCAAGCTTTCCGTGCCTGGCAACGTCCGAGCCCGCTTCGTGGCGCCTGCGCTGACCGGC TTCGGCGCCATGGCACTGGTCGGCTTTTACGCAGCACTTGCGCCGAGCATCCTGGCGCAGCAACTCCGGGTGACCAACCA TGCCGCAGCCGGCGCGCTGTTTTTCGAACTGACGATCGTGGCCGCCCTGACCATTCTGGCGACGACGCGGCTCTCGAGCC GTGTCACCATGTTCACGGCATTGGTCTTGATCATCCCCACTGTCGGATTGGTGGTGGCGGCACAATTCTTCGGCTCGATG GCCATCATGATCATCGCCACCGCTTGCTGCGGCGTGGCGTCGGCGCTCGGCTATCGTGGCGGTTTGCAAGTGGTCAACCA GATTGCGCCTGCCGAAAGGCGCGCCGAGGTGGTATCGGCCTTTTTCATCTGCTGCTTTTGTGGCAATGCGCTGCCAGTCA TCGGTATCGGCATTCTGTCGAATTGGACCACCGCGACGACGGCAAGCCTGGCCTTTGCCGGCATGATCACGATCTTTTCC TTGGTGGCGCTCGCGTTTGGCGCGAAGCATGCGCGATAG
Upstream 100 bases:
>100_bases CAAAGGTAAGAGAGGATTTCGCCCAGCGCCATGGGCGAACTTCAAACTTGTCAGGAGTGAATTCAGGGCGAGGAACGCAC GCCCTGCAAAGGCGTTGGTG
Downstream 100 bases:
>100_bases TCGCTGACGGCTCGGCGTCGCCAACGGCAGTAAACTCAGCTTTCAGCCGTTCGGCGTCTCGGGCGCCATGTTGGCGCGGC CGCGCGGCACGCCAAGGCCA
Product: multidrug efflux protein
Products: NA
Alternate protein names: Facilitator Superfamily Protein; MFS Transporter; Facilitator Superfamily Transporter; Facilitator Superfamily Transporter Permease; Mutlidrug Resistance Protein; Facilitator Superfamily Multidrug Resistance Protein; Drug Resistance Efflux Protein; Mfs Transporter; Arabinose Efflux Permease Family Protein; Multidrug Efflux Protein; Multi-Drug Efflux Transporter; Multidrug Resistance Protein; Facilitator Superfamily Permease; Facilitator Superfamily; ABC Transporter Membrane Protein; Drug Efflux Protein; Transmembrane Efflux Protein; Multidrug ABC Transporter; Facilitator Superfamily Multidrug Efflux Transporter; Permease Of Facilitator Superfamily; General Substrate Transporter; Facilitator Family Transporter; Facilitator Family Protein; Multidrug-Efflux MFS Permease; MFS Superfamily Transporter
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MRFPNNQDVEMTAHSIVLTRNNEFGGAAARAVVAAMIAVLFAGSTALTPLYIIYKQAFGFSQITLTLIYAVYVIGNLAAL LIFGGLSDVIGRRPAALAAMGVAVVSTLLFLFAENVAWLDAARILMGLAIGVGTGTGTAWLTELIATSDRSRAATIATST NFLGLGLGALGAGLLAEYAPWPLRLTFVVNLAVLVLVTILILRTRETVSRPGKLADISMRPKLSVPGNVRARFVAPALTG FGAMALVGFYAALAPSILAQQLRVTNHAAAGALFFELTIVAALTILATTRLSSRVTMFTALVLIIPTVGLVVAAQFFGSM AIMIIATACCGVASALGYRGGLQVVNQIAPAERRAEVVSAFFICCFCGNALPVIGIGILSNWTTATTASLAFAGMITIFS LVALAFGAKHAR
Sequences:
>Translated_412_residues MRFPNNQDVEMTAHSIVLTRNNEFGGAAARAVVAAMIAVLFAGSTALTPLYIIYKQAFGFSQITLTLIYAVYVIGNLAAL LIFGGLSDVIGRRPAALAAMGVAVVSTLLFLFAENVAWLDAARILMGLAIGVGTGTGTAWLTELIATSDRSRAATIATST NFLGLGLGALGAGLLAEYAPWPLRLTFVVNLAVLVLVTILILRTRETVSRPGKLADISMRPKLSVPGNVRARFVAPALTG FGAMALVGFYAALAPSILAQQLRVTNHAAAGALFFELTIVAALTILATTRLSSRVTMFTALVLIIPTVGLVVAAQFFGSM AIMIIATACCGVASALGYRGGLQVVNQIAPAERRAEVVSAFFICCFCGNALPVIGIGILSNWTTATTASLAFAGMITIFS LVALAFGAKHAR >Mature_412_residues MRFPNNQDVEMTAHSIVLTRNNEFGGAAARAVVAAMIAVLFAGSTALTPLYIIYKQAFGFSQITLTLIYAVYVIGNLAAL LIFGGLSDVIGRRPAALAAMGVAVVSTLLFLFAENVAWLDAARILMGLAIGVGTGTGTAWLTELIATSDRSRAATIATST NFLGLGLGALGAGLLAEYAPWPLRLTFVVNLAVLVLVTILILRTRETVSRPGKLADISMRPKLSVPGNVRARFVAPALTG FGAMALVGFYAALAPSILAQQLRVTNHAAAGALFFELTIVAALTILATTRLSSRVTMFTALVLIIPTVGLVVAAQFFGSM AIMIIATACCGVASALGYRGGLQVVNQIAPAERRAEVVSAFFICCFCGNALPVIGIGILSNWTTATTASLAFAGMITIFS LVALAFGAKHAR
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42902; Mature: 42902
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFPNNQDVEMTAHSIVLTRNNEFGGAAARAVVAAMIAVLFAGSTALTPLYIIYKQAFGF CCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCH SQITLTLIYAVYVIGNLAALLIFGGLSDVIGRRPAALAAMGVAVVSTLLFLFAENVAWLD HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHH AARILMGLAIGVGTGTGTAWLTELIATSDRSRAATIATSTNFLGLGLGALGAGLLAEYAP HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCC WPLRLTFVVNLAVLVLVTILILRTRETVSRPGKLADISMRPKLSVPGNVRARFVAPALTG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHH FGAMALVGFYAALAPSILAQQLRVTNHAAAGALFFELTIVAALTILATTRLSSRVTMFTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVLIIPTVGLVVAAQFFGSMAIMIIATACCGVASALGYRGGLQVVNQIAPAERRAEVVSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHH FFICCFCGNALPVIGIGILSNWTTATTASLAFAGMITIFSLVALAFGAKHAR HHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRFPNNQDVEMTAHSIVLTRNNEFGGAAARAVVAAMIAVLFAGSTALTPLYIIYKQAFGF CCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCH SQITLTLIYAVYVIGNLAALLIFGGLSDVIGRRPAALAAMGVAVVSTLLFLFAENVAWLD HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHH AARILMGLAIGVGTGTGTAWLTELIATSDRSRAATIATSTNFLGLGLGALGAGLLAEYAP HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCC WPLRLTFVVNLAVLVLVTILILRTRETVSRPGKLADISMRPKLSVPGNVRARFVAPALTG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHH FGAMALVGFYAALAPSILAQQLRVTNHAAAGALFFELTIVAALTILATTRLSSRVTMFTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVLIIPTVGLVVAAQFFGSMAIMIIATACCGVASALGYRGGLQVVNQIAPAERRAEVVSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHH FFICCFCGNALPVIGIGILSNWTTATTASLAFAGMITIFSLVALAFGAKHAR HHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA