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The map label for this gene is ynfJ [C]

Identifier: 13471491

GI number: 13471491

Start: 1226570

End: 1228408

Strand: Reverse

Name: ynfJ [C]

Synonym: mll1477

Alternate gene names: 13471491

Gene position: 1228408-1226570 (Counterclockwise)

Preceding gene: 13471495

Following gene: 13471486

Centisome position: 17.46

GC content: 66.23

Gene sequence:

>1839_bases
ATGCCGCACATTCGAGATCCGGCCGCCGCCAGAAAGCCCGCCATGAAGCCCTCCGAAAACAGCCATCTCAGCGATTTCAC
CACCGACGCGCGGGTGCTGACCATTGCCACCATAGCCGTGGTGGTCGCCACGGCGGGGCTGTTCGCCGGCATTGCGCTTT
TGAAACTGATCCGGCTTGCCACCAACATTGCCTATTTCGGCCAGTTCACGCTCGCCGAGCTGAAATTGCAGGACACGCCG
CTTGGGCTTGCAGCGGTGGTGGTGCCGGTCATCGGCGCACTGATCATCGGCCTGATGGCGCGCTACGGCAGCGAGAAGAT
CCGCGGCCATGGCATTCCCGAGGCGATCGAGGCGATCCTGCTCGGGCGTTCACGGCTCGGCGCCAAGGTGGCGATCCTGA
AGCCGCTGTCGTCGGCGATCTCTATCGGCTCCGGCGGACCGTTCGGCGCCGAAGGGCCGATCATCATGACCGGCGGCGCC
ATCGGCTCGCTGATCGCAAAGATGCTGCCGGTCAGCGACAATGAACGCAAGACGCTGCTGGTGGCGGGGGCCGCGGCCGG
CATGACCACCGTGTTCGGCACGCCGATCGCGGCCATCATGCTGGCGGTGGAACTGCTGCTGTTCGAATGGACGCCGCGCT
CCTTCATTCCCGTGGCGGTTGCCGCGATCATTGCCGAGGTCGAGCGCACCGCGCTGCATCTGCCAGGGCCGATCTTTCCG
TTTCAGGGCGGCATGGCGGTCTCGTTCACCGGACTTGGCGGCTGGGTTCTGGTCGGTATCTGCGCCGGCCTGCTGTCGGG
GCTGCTCACCCAGATGGTCTATGCCTGCGAGGACGCTTTCCAGAAACTGCCCATCCATTGGATGTGGTGGCCGATGATCG
GCGGCCTGGTGGTCGGCATCGGCGGGCTGATCGAGCCACGGGCGCTCGGCGTCGGTTACGACAACATCGCCGACATGCTG
GATGGCCGCACGGTCGCGACCGCCGCGCTGCTGCTGTTGGTGATCAAGGCTATCATCTGGTCGGTGGCGCTCGGTTCGGG
AACTTCCGGCGGCGTGCTGGCGCCGCTGCTGATCATGGGGGGCGCAATGGGGGCGGTGCTCGCCGGCATCCTGCCAGCGG
CGGATCCGGGCTTCTGGGCGCTGCTTGCAATGTCGGCGACCATGGGCGGCACGATGCGGGCGCCGCTGACGGCGACGTTC
TTTGCGGTGGAACTGACCGGCAACACGCATGTGCTGGTGCCGCTGATCGCGGCCTGTGCTGCGGCGCATGCCGTCACCGT
GCTGCTGATGAAGCGGTCGATCCTGACCGAGAAGATCGCCAGGCGAGGGCACCACCTCGTGCGCGAATACCGCGTCGACC
CGTTCGCGCTGACCAGGGTGCGCGAGGTGATGACGGCGCAGGTCGAGAGCGTGCCGGCGACGATGACGCTGCACGGCGCC
GCCGCCTTCCTGACCGCGCCGGAAACCCGGCATCCGAGCTTCCCGGTCATCGACGAGAACAGGCGGGTGCTCGGCCTCAT
CGATCCACCGGCGATCCTGCGCTGGCGCCGTGCCGGCAAGCACAGGACGACGAGGCTCAGTGACCTGCTTGCCGGAAGCA
AGGTGACGCTTGCCTATCCCGACGAATATCTCGAAGGCCTCTCCGACAAGCTGTTGATGGCCAATGTCTCGCATCTGCCG
GTCGTGACCCGCGAAAGCCTGCAACTGGTCGGCTATGCCGGCTGGAAGGATCTGATGCGCGTGCGGTCGAGAAAACAGGC
CGAGGAACGCGACCATTCGACCTTGCTTGGCTTCGGCACCAGGCGCGGGAAAAAGGCGGACGCGGTCGAGGGCGTCTAG

Upstream 100 bases:

>100_bases
ATTCCGGCTAAAGGCTCAAACGGTTTTGCTGCAAAACCGGCTTGAATTTATATCGTGTTACGATACATAGCGAGCCGAAA
AGCCCGCCGGCATCTCCGCC

Downstream 100 bases:

>100_bases
TCCAAGCTGGCTCCGCGCTTCGCCCATTCCAGCACATGCAGCCGCAGCGCCGAGGATAGGTTGGTGTCGCGGGGCCGTTT
CTCATCGACTTCGGCGACAA

Product: chloride channel protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 612; Mature: 611

Protein sequence:

>612_residues
MPHIRDPAAARKPAMKPSENSHLSDFTTDARVLTIATIAVVVATAGLFAGIALLKLIRLATNIAYFGQFTLAELKLQDTP
LGLAAVVVPVIGALIIGLMARYGSEKIRGHGIPEAIEAILLGRSRLGAKVAILKPLSSAISIGSGGPFGAEGPIIMTGGA
IGSLIAKMLPVSDNERKTLLVAGAAAGMTTVFGTPIAAIMLAVELLLFEWTPRSFIPVAVAAIIAEVERTALHLPGPIFP
FQGGMAVSFTGLGGWVLVGICAGLLSGLLTQMVYACEDAFQKLPIHWMWWPMIGGLVVGIGGLIEPRALGVGYDNIADML
DGRTVATAALLLLVIKAIIWSVALGSGTSGGVLAPLLIMGGAMGAVLAGILPAADPGFWALLAMSATMGGTMRAPLTATF
FAVELTGNTHVLVPLIAACAAAHAVTVLLMKRSILTEKIARRGHHLVREYRVDPFALTRVREVMTAQVESVPATMTLHGA
AAFLTAPETRHPSFPVIDENRRVLGLIDPPAILRWRRAGKHRTTRLSDLLAGSKVTLAYPDEYLEGLSDKLLMANVSHLP
VVTRESLQLVGYAGWKDLMRVRSRKQAEERDHSTLLGFGTRRGKKADAVEGV

Sequences:

>Translated_612_residues
MPHIRDPAAARKPAMKPSENSHLSDFTTDARVLTIATIAVVVATAGLFAGIALLKLIRLATNIAYFGQFTLAELKLQDTP
LGLAAVVVPVIGALIIGLMARYGSEKIRGHGIPEAIEAILLGRSRLGAKVAILKPLSSAISIGSGGPFGAEGPIIMTGGA
IGSLIAKMLPVSDNERKTLLVAGAAAGMTTVFGTPIAAIMLAVELLLFEWTPRSFIPVAVAAIIAEVERTALHLPGPIFP
FQGGMAVSFTGLGGWVLVGICAGLLSGLLTQMVYACEDAFQKLPIHWMWWPMIGGLVVGIGGLIEPRALGVGYDNIADML
DGRTVATAALLLLVIKAIIWSVALGSGTSGGVLAPLLIMGGAMGAVLAGILPAADPGFWALLAMSATMGGTMRAPLTATF
FAVELTGNTHVLVPLIAACAAAHAVTVLLMKRSILTEKIARRGHHLVREYRVDPFALTRVREVMTAQVESVPATMTLHGA
AAFLTAPETRHPSFPVIDENRRVLGLIDPPAILRWRRAGKHRTTRLSDLLAGSKVTLAYPDEYLEGLSDKLLMANVSHLP
VVTRESLQLVGYAGWKDLMRVRSRKQAEERDHSTLLGFGTRRGKKADAVEGV
>Mature_611_residues
PHIRDPAAARKPAMKPSENSHLSDFTTDARVLTIATIAVVVATAGLFAGIALLKLIRLATNIAYFGQFTLAELKLQDTPL
GLAAVVVPVIGALIIGLMARYGSEKIRGHGIPEAIEAILLGRSRLGAKVAILKPLSSAISIGSGGPFGAEGPIIMTGGAI
GSLIAKMLPVSDNERKTLLVAGAAAGMTTVFGTPIAAIMLAVELLLFEWTPRSFIPVAVAAIIAEVERTALHLPGPIFPF
QGGMAVSFTGLGGWVLVGICAGLLSGLLTQMVYACEDAFQKLPIHWMWWPMIGGLVVGIGGLIEPRALGVGYDNIADMLD
GRTVATAALLLLVIKAIIWSVALGSGTSGGVLAPLLIMGGAMGAVLAGILPAADPGFWALLAMSATMGGTMRAPLTATFF
AVELTGNTHVLVPLIAACAAAHAVTVLLMKRSILTEKIARRGHHLVREYRVDPFALTRVREVMTAQVESVPATMTLHGAA
AFLTAPETRHPSFPVIDENRRVLGLIDPPAILRWRRAGKHRTTRLSDLLAGSKVTLAYPDEYLEGLSDKLLMANVSHLPV
VTRESLQLVGYAGWKDLMRVRSRKQAEERDHSTLLGFGTRRGKKADAVEGV

Specific function: Unknown

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chloride channel (TC 2.A.49) family. ClcB subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081943, Length=353, Percent_Identity=27.4787535410765, Blast_Score=83, Evalue=6e-17,
Organism=Escherichia coli, GI1786350, Length=281, Percent_Identity=25.9786476868327, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014743
- InterPro:   IPR001807 [H]

Pfam domain/function: PF00654 Voltage_CLC [H]

EC number: NA

Molecular weight: Translated: 64591; Mature: 64460

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHIRDPAAARKPAMKPSENSHLSDFTTDARVLTIATIAVVVATAGLFAGIALLKLIRLA
CCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TNIAYFGQFTLAELKLQDTPLGLAAVVVPVIGALIIGLMARYGSEKIRGHGIPEAIEAIL
HHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHH
LGRSRLGAKVAILKPLSSAISIGSGGPFGAEGPIIMTGGAIGSLIAKMLPVSDNERKTLL
HCCHHCCCEEEEEHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCEEE
VAGAAAGMTTVFGTPIAAIMLAVELLLFEWTPRSFIPVAVAAIIAEVERTALHLPGPIFP
EEECCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
FQGGMAVSFTGLGGWVLVGICAGLLSGLLTQMVYACEDAFQKLPIHWMWWPMIGGLVVGI
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHH
GGLIEPRALGVGYDNIADMLDGRTVATAALLLLVIKAIIWSVALGSGTSGGVLAPLLIMG
CCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHC
GAMGAVLAGILPAADPGFWALLAMSATMGGTMRAPLTATFFAVELTGNTHVLVPLIAACA
CHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCEEHHHHHHHHH
AAHAVTVLLMKRSILTEKIARRGHHLVREYRVDPFALTRVREVMTAQVESVPATMTLHGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEECCC
AAFLTAPETRHPSFPVIDENRRVLGLIDPPAILRWRRAGKHRTTRLSDLLAGSKVTLAYP
EEEEECCCCCCCCCCEECCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCEEEEECC
DEYLEGLSDKLLMANVSHLPVVTRESLQLVGYAGWKDLMRVRSRKQAEERDHSTLLGFGT
HHHHCCCCCHHHHHCCCCCCEEECCHHHHEEECCHHHHHHHHHHHHHHHHCCCEEEECCC
RRGKKADAVEGV
CCCCCCCCCCCC
>Mature Secondary Structure 
PHIRDPAAARKPAMKPSENSHLSDFTTDARVLTIATIAVVVATAGLFAGIALLKLIRLA
CCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TNIAYFGQFTLAELKLQDTPLGLAAVVVPVIGALIIGLMARYGSEKIRGHGIPEAIEAIL
HHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHH
LGRSRLGAKVAILKPLSSAISIGSGGPFGAEGPIIMTGGAIGSLIAKMLPVSDNERKTLL
HCCHHCCCEEEEEHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCEEE
VAGAAAGMTTVFGTPIAAIMLAVELLLFEWTPRSFIPVAVAAIIAEVERTALHLPGPIFP
EEECCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
FQGGMAVSFTGLGGWVLVGICAGLLSGLLTQMVYACEDAFQKLPIHWMWWPMIGGLVVGI
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHH
GGLIEPRALGVGYDNIADMLDGRTVATAALLLLVIKAIIWSVALGSGTSGGVLAPLLIMG
CCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHC
GAMGAVLAGILPAADPGFWALLAMSATMGGTMRAPLTATFFAVELTGNTHVLVPLIAACA
CHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCEEHHHHHHHHH
AAHAVTVLLMKRSILTEKIARRGHHLVREYRVDPFALTRVREVMTAQVESVPATMTLHGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEECCC
AAFLTAPETRHPSFPVIDENRRVLGLIDPPAILRWRRAGKHRTTRLSDLLAGSKVTLAYP
EEEEECCCCCCCCCCEECCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCEEEEECC
DEYLEGLSDKLLMANVSHLPVVTRESLQLVGYAGWKDLMRVRSRKQAEERDHSTLLGFGT
HHHHCCCCCHHHHHCCCCCCEEECCHHHHEEECCHHHHHHHHHHHHHHHHCCCEEEECCC
RRGKKADAVEGV
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]