| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471459
Identifier: 13471459
GI number: 13471459
Start: 1199327
End: 1200523
Strand: Reverse
Name: 13471459
Synonym: mll1436
Alternate gene names: NA
Gene position: 1200523-1199327 (Counterclockwise)
Preceding gene: 13471461
Following gene: 13471456
Centisome position: 17.06
GC content: 66.17
Gene sequence:
>1197_bases GTGCGGCTGACAGGGTTCCAATCGGGAAAGACGGCCATGGCCAGGTCCATGATCCAGCGCAGGCAGGACGCCGAGCGCCA ACGCATTGAAGCATATCAAGCATCGCTGCGGCGGGTTTGCGCCATGCCGCGCCCTGCTCCGGATTTCGAACGGGCGCTCG ACGAGGTACGCCGAGGTCATGCCGGCGTGGCGATCCGCGACAGGGCCTTGTGGCGTCCGAAGCTGAAGACGCGCGACCCG GCGCGGCTGCGGCTGGCGGCTGCGCGCTACCTCTATGCGCGCTATCCGGTTTCGGCCGCGCTCGAGGCCATCTGGCTGGA TCGGTCGGGGCTGGATGGCCAGGAGATCGCGCTTCGCCTTGCCTGGTACGTCGTGGTTGCAGGTGGTGGGTCGCTCTACA AGGCAGGCGCCAATGCGTGGCTGTCGCGCAAGGAGGTGCATTGCTTCCTCAACCTGTCTGGCGATTTCACGTTCGACGAG GCGTTCTGGTTCGCGATTGCTCGCTCCTACACCGAGGATTGCGGACTGGCCGCTCGCCTTGCGCGCACCAAGATCGCGCG CACGCCGCGTGGCGATCTGGCCTTCTGGCGCGAGGTGGTTCGCTTCTTCTGCGGGCAGCCAACGTCGAAGGAGGAGATCG ACGACCTCAGCGACTATATCGCCGCCATGCACCGGCGCGACAAGGCGTATAGCCTGAAGGGCCGCACGCTTGCCTCGCTG AACCGGCAGATGTCGGATTGGCATCGCGACCTTGCCGCGATCGAACGCATCGAGGCGATGCGCCGGCGTGCCGCCGCGCG GGCTCAACCCGCTGCCGGCGCACCGGCGCAAAACAACGCATGGGCCGGCTCGCGCCTGCAGGATTGGGAATGGCATCCGC CGCCCAAGGAAGCGAGGGCGCATGGCGAGTGGTTCTCTGTCCGCCAGCTGAAGACGGCGGAGGATCTCGTTGCCGAGTCG AGGGCGATGCATCACTGCGTGTCGTCCTACGCGACCAAATGCATTGGCGGCTACGCCTCGATCTGGACGCTGCGGCGCAA GGCGCTCGGCAAGATCGAATGCTTGCTGACGATCGAGCTCGATCCACAGCATCGGGCGGTGCAGGTGCGCGGTTTCGGCA ATCGTCTGGCTACGCCGGATGAACGCAAGATCCTCGAGCGCTGGGCCAAGGCGCGGGGGGTGATGCTGCGTGACTGA
Upstream 100 bases:
>100_bases GCCTAGAGAGCCTGCCCGTTCCAACCCGTCATCCCAGAGGAGACCTGTCAAATGTCACGCCAATCCAGATCGACACATTC CGTGCCGGCGCTGGAATTGC
Downstream 100 bases:
>100_bases AACGAAACCCCGCGCAGCGGAGATGCCGCGCGGGGTTTCTCATTGCCGATGCGGGATGGCGGAAAACCTCCCGCGCTTGC CGGCTATCCCTTGTGATGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MRLTGFQSGKTAMARSMIQRRQDAERQRIEAYQASLRRVCAMPRPAPDFERALDEVRRGHAGVAIRDRALWRPKLKTRDP ARLRLAAARYLYARYPVSAALEAIWLDRSGLDGQEIALRLAWYVVVAGGGSLYKAGANAWLSRKEVHCFLNLSGDFTFDE AFWFAIARSYTEDCGLAARLARTKIARTPRGDLAFWREVVRFFCGQPTSKEEIDDLSDYIAAMHRRDKAYSLKGRTLASL NRQMSDWHRDLAAIERIEAMRRRAAARAQPAAGAPAQNNAWAGSRLQDWEWHPPPKEARAHGEWFSVRQLKTAEDLVAES RAMHHCVSSYATKCIGGYASIWTLRRKALGKIECLLTIELDPQHRAVQVRGFGNRLATPDERKILERWAKARGVMLRD
Sequences:
>Translated_398_residues MRLTGFQSGKTAMARSMIQRRQDAERQRIEAYQASLRRVCAMPRPAPDFERALDEVRRGHAGVAIRDRALWRPKLKTRDP ARLRLAAARYLYARYPVSAALEAIWLDRSGLDGQEIALRLAWYVVVAGGGSLYKAGANAWLSRKEVHCFLNLSGDFTFDE AFWFAIARSYTEDCGLAARLARTKIARTPRGDLAFWREVVRFFCGQPTSKEEIDDLSDYIAAMHRRDKAYSLKGRTLASL NRQMSDWHRDLAAIERIEAMRRRAAARAQPAAGAPAQNNAWAGSRLQDWEWHPPPKEARAHGEWFSVRQLKTAEDLVAES RAMHHCVSSYATKCIGGYASIWTLRRKALGKIECLLTIELDPQHRAVQVRGFGNRLATPDERKILERWAKARGVMLRD >Mature_398_residues MRLTGFQSGKTAMARSMIQRRQDAERQRIEAYQASLRRVCAMPRPAPDFERALDEVRRGHAGVAIRDRALWRPKLKTRDP ARLRLAAARYLYARYPVSAALEAIWLDRSGLDGQEIALRLAWYVVVAGGGSLYKAGANAWLSRKEVHCFLNLSGDFTFDE AFWFAIARSYTEDCGLAARLARTKIARTPRGDLAFWREVVRFFCGQPTSKEEIDDLSDYIAAMHRRDKAYSLKGRTLASL NRQMSDWHRDLAAIERIEAMRRRAAARAQPAAGAPAQNNAWAGSRLQDWEWHPPPKEARAHGEWFSVRQLKTAEDLVAES RAMHHCVSSYATKCIGGYASIWTLRRKALGKIECLLTIELDPQHRAVQVRGFGNRLATPDERKILERWAKARGVMLRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45306; Mature: 45306
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTGFQSGKTAMARSMIQRRQDAERQRIEAYQASLRRVCAMPRPAPDFERALDEVRRGH CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC AGVAIRDRALWRPKLKTRDPARLRLAAARYLYARYPVSAALEAIWLDRSGLDGQEIALRL CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHH AWYVVVAGGGSLYKAGANAWLSRKEVHCFLNLSGDFTFDEAFWFAIARSYTEDCGLAARL HHHHEEECCCHHHHCCHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH ARTKIARTPRGDLAFWREVVRFFCGQPTSKEEIDDLSDYIAAMHRRDKAYSLKGRTLASL HHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHH NRQMSDWHRDLAAIERIEAMRRRAAARAQPAAGAPAQNNAWAGSRLQDWEWHPPPKEARA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC HGEWFSVRQLKTAEDLVAESRAMHHCVSSYATKCIGGYASIWTLRRKALGKIECLLTIEL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEE DPQHRAVQVRGFGNRLATPDERKILERWAKARGVMLRD CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRLTGFQSGKTAMARSMIQRRQDAERQRIEAYQASLRRVCAMPRPAPDFERALDEVRRGH CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC AGVAIRDRALWRPKLKTRDPARLRLAAARYLYARYPVSAALEAIWLDRSGLDGQEIALRL CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHH AWYVVVAGGGSLYKAGANAWLSRKEVHCFLNLSGDFTFDEAFWFAIARSYTEDCGLAARL HHHHEEECCCHHHHCCHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH ARTKIARTPRGDLAFWREVVRFFCGQPTSKEEIDDLSDYIAAMHRRDKAYSLKGRTLASL HHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHH NRQMSDWHRDLAAIERIEAMRRRAAARAQPAAGAPAQNNAWAGSRLQDWEWHPPPKEARA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC HGEWFSVRQLKTAEDLVAESRAMHHCVSSYATKCIGGYASIWTLRRKALGKIECLLTIEL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEE DPQHRAVQVRGFGNRLATPDERKILERWAKARGVMLRD CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA