| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471383
Identifier: 13471383
GI number: 13471383
Start: 1120854
End: 1122104
Strand: Reverse
Name: 13471383
Synonym: mll1338
Alternate gene names: NA
Gene position: 1122104-1120854 (Counterclockwise)
Preceding gene: 13471384
Following gene: 13471377
Centisome position: 15.95
GC content: 66.91
Gene sequence:
>1251_bases GTGTCGCCCATCGTCACGGCCATTCTGGTGGCCAGCAATCTCGGGCTGATCTTTCTCTTGATGACCGTGCCGCTTGGTTT GCGCACGGTCAGGGTCAGCCGCGTGATTGCGATGGACCGCGGGCGCCTCTGGCAGGCGCTGTGGCCACTTGGCAGCGATG CCGGCTGGTCCGGTGAGATCCTATCGGCTGAGCCGCTGGACGGGGAGGGTGTGTCCCGCATCATGCTGTCGTGGGAAGGC CGCGACGGCGAGCCGATCGAGCGCAGGGCGCGGTTTGACGATGTCGTCGAGGGCAGCCGCTTCTCGATGCGTGTGCTTGA GGATACCGCGCTCGATGCCTCGTTCTGGAAAGACTATCGCGAAACCGCAGAGCTGGTTTCCGAAGGCAGCGGCACGCGGG TGACGCTCGGCCGGACGGATCGTTACCGCGGCGTTGCCTTTCTGGTGTTCCGTTACTTCGCCATGCGCCGCGAGCTGTCC AAGCTGCAGCGTTGGGCGATGACCGGGCAGTACCGCAAGGGCGGCTGGTTCGAGCATCCGCTGAGCCAGGTCGGCTTTGC CGTGCTGTCGGCACTGATCCTGTGGCCGTTCTTCGGCCTCCACCTCGGCGGGCTGGCGCTGGCCGCCATCCTGACGTCGG TCGTTGCCTTGCACGAACTCGGCCACATGGCGGCATTCCGGCTGATGGGCCACCGCAAGGCGCGGATGATCTTCATTCCG CTGCTCGGCGGCATCGCCATTGGCGGCCGGCCCTACAACAGCCGTTTCGAAGTGGCCTTCGTGGCGCTGATGGGGGCGGG CTTTTCCGCCTTCCTGGTGCCGATCGCCATCGCCGCGAGCGCGTTTGCGGGCAGCGAGGGGCACAAGGCCGCGGCCGCGC TGCTGGCCGCGCTGGCCGGCTGCGCGGCCCTGTTCAACATCGCCAATCTGGTGCCGGTGTGGAAATTCGACGGTGGCCAG GTGCTGCGCCAGATCTGCCCGGGGCCGGTCGCGCTGGCGCTGGCCTCGTTCTTCCTGCTCTCGGCTTTCCTGGCGGTGGG GTGGGAGGCCGGCTTTTCCTCCGGCTTTCTGCTGGCGACCGGGGCGGTCTTTTCAATCCTCAGCCTGCTGACGATGGGCA GCGGGGTGAAGCCGCGTTACGAGCTGAAGCCGATCCGTACCGTCGACCGCTTCGCCATTGCCGGCGCGCTGCTGGCGGTG TTCGTCATCCATGGCTGCGGCGTTCTGTGGGCGTCGGCGCAATTGCTTTGA
Upstream 100 bases:
>100_bases CGCCGCCGTCGTTCGTGGCGGGTGAAGCCCGCTTCCCCGTTAAGCCTTTCTTGCCGCCGCGGCGCTAGGGTGCGCCTCTC AGGCAGGGAGCAACATCCAG
Downstream 100 bases:
>100_bases GCTGGTTTGGCCCGAAAGGGTCAACCCGTCTTGCGGGCGACCTCGGCAGGCAAAGCCGCAACGGGGCCGAACACATCCTC GAAGGCTGATTTCAGCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MSPIVTAILVASNLGLIFLLMTVPLGLRTVRVSRVIAMDRGRLWQALWPLGSDAGWSGEILSAEPLDGEGVSRIMLSWEG RDGEPIERRARFDDVVEGSRFSMRVLEDTALDASFWKDYRETAELVSEGSGTRVTLGRTDRYRGVAFLVFRYFAMRRELS KLQRWAMTGQYRKGGWFEHPLSQVGFAVLSALILWPFFGLHLGGLALAAILTSVVALHELGHMAAFRLMGHRKARMIFIP LLGGIAIGGRPYNSRFEVAFVALMGAGFSAFLVPIAIAASAFAGSEGHKAAAALLAALAGCAALFNIANLVPVWKFDGGQ VLRQICPGPVALALASFFLLSAFLAVGWEAGFSSGFLLATGAVFSILSLLTMGSGVKPRYELKPIRTVDRFAIAGALLAV FVIHGCGVLWASAQLL
Sequences:
>Translated_416_residues MSPIVTAILVASNLGLIFLLMTVPLGLRTVRVSRVIAMDRGRLWQALWPLGSDAGWSGEILSAEPLDGEGVSRIMLSWEG RDGEPIERRARFDDVVEGSRFSMRVLEDTALDASFWKDYRETAELVSEGSGTRVTLGRTDRYRGVAFLVFRYFAMRRELS KLQRWAMTGQYRKGGWFEHPLSQVGFAVLSALILWPFFGLHLGGLALAAILTSVVALHELGHMAAFRLMGHRKARMIFIP LLGGIAIGGRPYNSRFEVAFVALMGAGFSAFLVPIAIAASAFAGSEGHKAAAALLAALAGCAALFNIANLVPVWKFDGGQ VLRQICPGPVALALASFFLLSAFLAVGWEAGFSSGFLLATGAVFSILSLLTMGSGVKPRYELKPIRTVDRFAIAGALLAV FVIHGCGVLWASAQLL >Mature_415_residues SPIVTAILVASNLGLIFLLMTVPLGLRTVRVSRVIAMDRGRLWQALWPLGSDAGWSGEILSAEPLDGEGVSRIMLSWEGR DGEPIERRARFDDVVEGSRFSMRVLEDTALDASFWKDYRETAELVSEGSGTRVTLGRTDRYRGVAFLVFRYFAMRRELSK LQRWAMTGQYRKGGWFEHPLSQVGFAVLSALILWPFFGLHLGGLALAAILTSVVALHELGHMAAFRLMGHRKARMIFIPL LGGIAIGGRPYNSRFEVAFVALMGAGFSAFLVPIAIAASAFAGSEGHKAAAALLAALAGCAALFNIANLVPVWKFDGGQV LRQICPGPVALALASFFLLSAFLAVGWEAGFSSGFLLATGAVFSILSLLTMGSGVKPRYELKPIRTVDRFAIAGALLAVF VIHGCGVLWASAQLL
Specific function: Unknown
COG id: COG1994
COG function: function code R; Zn-dependent proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44892; Mature: 44761
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPIVTAILVASNLGLIFLLMTVPLGLRTVRVSRVIAMDRGRLWQALWPLGSDAGWSGEI CCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCC LSAEPLDGEGVSRIMLSWEGRDGEPIERRARFDDVVEGSRFSMRVLEDTALDASFWKDYR CCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHH ETAELVSEGSGTRVTLGRTDRYRGVAFLVFRYFAMRRELSKLQRWAMTGQYRKGGWFEHP HHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH LSQVGFAVLSALILWPFFGLHLGGLALAAILTSVVALHELGHMAAFRLMGHRKARMIFIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE LLGGIAIGGRPYNSRFEVAFVALMGAGFSAFLVPIAIAASAFAGSEGHKAAAALLAALAG HHCCEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH CAALFNIANLVPVWKFDGGQVLRQICPGPVALALASFFLLSAFLAVGWEAGFSSGFLLAT HHHHHHHHHHCEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH GAVFSILSLLTMGSGVKPRYELKPIRTVDRFAIAGALLAVFVIHGCGVLWASAQLL HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SPIVTAILVASNLGLIFLLMTVPLGLRTVRVSRVIAMDRGRLWQALWPLGSDAGWSGEI CHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCC LSAEPLDGEGVSRIMLSWEGRDGEPIERRARFDDVVEGSRFSMRVLEDTALDASFWKDYR CCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHH ETAELVSEGSGTRVTLGRTDRYRGVAFLVFRYFAMRRELSKLQRWAMTGQYRKGGWFEHP HHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH LSQVGFAVLSALILWPFFGLHLGGLALAAILTSVVALHELGHMAAFRLMGHRKARMIFIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE LLGGIAIGGRPYNSRFEVAFVALMGAGFSAFLVPIAIAASAFAGSEGHKAAAALLAALAG HHCCEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH CAALFNIANLVPVWKFDGGQVLRQICPGPVALALASFFLLSAFLAVGWEAGFSSGFLLAT HHHHHHHHHHCEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH GAVFSILSLLTMGSGVKPRYELKPIRTVDRFAIAGALLAVFVIHGCGVLWASAQLL HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA