| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471376
Identifier: 13471376
GI number: 13471376
Start: 1113598
End: 1114458
Strand: Reverse
Name: 13471376
Synonym: mll1328
Alternate gene names: NA
Gene position: 1114458-1113598 (Counterclockwise)
Preceding gene: 13471377
Following gene: 13471375
Centisome position: 15.84
GC content: 63.41
Gene sequence:
>861_bases ATGACTGAGTTCGACACCTCGAGCCAGGACGCCGCAACGCTAGAAACAGCGCCCACCCGTTACATCGAAGGGGGCGGAAT CCGTTTCGCCTATCGCCGCCTCGGCCCATCGACCGGAACGGTGCTTGTTCTCCTGCAGCATTTCTCGGGCAACATCGACG CGTGGGACCCCGCCGTCGTGAATGTCCTGGCCACCGATCGACCGGTGATCGCTTTCGATAACGCCGGGGTCGGCCGCTCG ACAGGCCAAACGCCCGACAATATCGCGGCGATGGCCCGAGACGCGGTCGCTTTTATCAAACTGCTCGGCCTCTCCGAAGT CGACCTTCTTGGCTTTTCCCTCGGCGGCTGCGTCGCCCAGCAGATCGCTGCCGAGCACGGACGGCTGGTGCGCAAGCTCA TCCTCGTCGGCACGGCTCCGAGAGGCGGAGAAGAGCATCTGTTGACGGTTCTCCAGGACGCGTTTTCCCAAACCGACGCG CCGGACGTCCGCCTGCCACTATTCTTCACGAAGTCGTCCGCCAGCCAGTCGGCCGGTCTGGCTTTCCTGAAACGGGCGAA GGTGCGTAAGGAAGATCGGGACACCGATAACGGCAGCGCGGTGACGGATCCGCAGGCCAAGGCGCTTATTACCTGGTGCG CCACACCTGATCCCGAGCACGCCATTCTGCGCGCCATCCGCCAGCCCGCCCTTGTGGTCAGCGGCAGCCACGACACCATG CTGCCGGCGGACAACGCCTACGCAATGTTCAAGGCTCTGAGCAACGCCCAGCTGGTCCTTTATCCCGATTCCGGCCACGG CGCCCTGTTTCAGTACCACGAGTTGTTCGTCAGCCACGTCCGGACCTTCCTGGAAGCGTAA
Upstream 100 bases:
>100_bases CGGACTACGGAATGCCTTGGTCCGCGAGCGGCTCAAACCTAGCCAAAACCGCACCAGCTACGCCCACTCGATTATCTGTG CCAAGCATCCGGAGGATGAC
Downstream 100 bases:
>100_bases TCGGCGGTGGCATAATCCGGCGCGATCGGGCGCGCCTTTATTCTTGAGAACTGTTGCGGAGAGAGAAATGACAATCGCAA AGGTCGAGGTTGAGCGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase; Alpha/Beta Hydrolase; Alpha/Beta Fold Family Hydrolase; Hydrolase Alpha/Beta Fold Family; Hydrolase Alpha/Beta Hydrolase Fold Family; Lipolytic; 3-Oxoadipate Enol-Lactonase; Hydrolase Alpha; Poly(3-Hydroxyalkanoate) Depolymerase; Alpha/Beta Family Hydrolase; Alpha/Beta Superfamily Hydrolase/Acyltransferase; Cultivcificity Protein W; Hydrolase Alpha/Beta Hydrolase Fold Family Protein; Poly(3-Hydroxyalkanoic Acid) Depolymerase; Hydrolase Alpha/Beta Fold Domain-Containing Protein; Alpha/Beta Hydrolase Fold-Domain Containing Protein; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Fold Hydrolase; Hydrolase Alpha/Beta Domain Protein; Orf_Bo; Nodulation Related Protein; Meta Cleavage Compound Hydrolase
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MTEFDTSSQDAATLETAPTRYIEGGGIRFAYRRLGPSTGTVLVLLQHFSGNIDAWDPAVVNVLATDRPVIAFDNAGVGRS TGQTPDNIAAMARDAVAFIKLLGLSEVDLLGFSLGGCVAQQIAAEHGRLVRKLILVGTAPRGGEEHLLTVLQDAFSQTDA PDVRLPLFFTKSSASQSAGLAFLKRAKVRKEDRDTDNGSAVTDPQAKALITWCATPDPEHAILRAIRQPALVVSGSHDTM LPADNAYAMFKALSNAQLVLYPDSGHGALFQYHELFVSHVRTFLEA
Sequences:
>Translated_286_residues MTEFDTSSQDAATLETAPTRYIEGGGIRFAYRRLGPSTGTVLVLLQHFSGNIDAWDPAVVNVLATDRPVIAFDNAGVGRS TGQTPDNIAAMARDAVAFIKLLGLSEVDLLGFSLGGCVAQQIAAEHGRLVRKLILVGTAPRGGEEHLLTVLQDAFSQTDA PDVRLPLFFTKSSASQSAGLAFLKRAKVRKEDRDTDNGSAVTDPQAKALITWCATPDPEHAILRAIRQPALVVSGSHDTM LPADNAYAMFKALSNAQLVLYPDSGHGALFQYHELFVSHVRTFLEA >Mature_285_residues TEFDTSSQDAATLETAPTRYIEGGGIRFAYRRLGPSTGTVLVLLQHFSGNIDAWDPAVVNVLATDRPVIAFDNAGVGRST GQTPDNIAAMARDAVAFIKLLGLSEVDLLGFSLGGCVAQQIAAEHGRLVRKLILVGTAPRGGEEHLLTVLQDAFSQTDAP DVRLPLFFTKSSASQSAGLAFLKRAKVRKEDRDTDNGSAVTDPQAKALITWCATPDPEHAILRAIRQPALVVSGSHDTML PADNAYAMFKALSNAQLVLYPDSGHGALFQYHELFVSHVRTFLEA
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30687; Mature: 30556
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEFDTSSQDAATLETAPTRYIEGGGIRFAYRRLGPSTGTVLVLLQHFSGNIDAWDPAVV CCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCEEEEEEHHCCCCCCCCHHHE NVLATDRPVIAFDNAGVGRSTGQTPDNIAAMARDAVAFIKLLGLSEVDLLGFSLGGCVAQ EEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH QIAAEHGRLVRKLILVGTAPRGGEEHLLTVLQDAFSQTDAPDVRLPLFFTKSSASQSAGL HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHH AFLKRAKVRKEDRDTDNGSAVTDPQAKALITWCATPDPEHAILRAIRQPALVVSGSHDTM HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCEEEEECCCCCC LPADNAYAMFKALSNAQLVLYPDSGHGALFQYHELFVSHVRTFLEA CCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TEFDTSSQDAATLETAPTRYIEGGGIRFAYRRLGPSTGTVLVLLQHFSGNIDAWDPAVV CCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCEEEEEEHHCCCCCCCCHHHE NVLATDRPVIAFDNAGVGRSTGQTPDNIAAMARDAVAFIKLLGLSEVDLLGFSLGGCVAQ EEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH QIAAEHGRLVRKLILVGTAPRGGEEHLLTVLQDAFSQTDAPDVRLPLFFTKSSASQSAGL HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHH AFLKRAKVRKEDRDTDNGSAVTDPQAKALITWCATPDPEHAILRAIRQPALVVSGSHDTM HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCEEEEECCCCCC LPADNAYAMFKALSNAQLVLYPDSGHGALFQYHELFVSHVRTFLEA CCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA